Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
4. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
5. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
6. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
7. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
12. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
13. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
14. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
15. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
16. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
17. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
18. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
19. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
20. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
21. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
22. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. RFX4 ENSGALG00000012647 119 0.768 - - - - - - - 0.768 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
27. ING1 ENSGALG00000016849 89 0.768 - - - - - - - 0.768 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
28. WDR90_1 ENSGALG00000028172 2 0.768 - - - - - - - 0.768 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
29. CRYBA2 ENSGALG00000011354 14 0.768 - - - - - - - 0.768 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
30. LRP3 ENSGALG00000004853 13 0.768 - - - - - - - 0.768 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
31. RBMS3 ENSGALG00000011439 25 0.768 - - - - - - - 0.768 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
32. SMTN 18 0.768 - - - - - - - 0.768 - - smoothelin, transcript variant X2
33. CKMT1A ENSGALG00000008352 44 0.768 - - - - - - - 0.768 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
34. PBEF1 PBEF1 25 0.768 - - - - - - - 0.768 - -
35. PPIL6 ENSGALG00000015237 11 0.768 - - - - - - - 0.768 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
36. DNAH14 ENSGALG00000045078 1 0.768 - - - - - - - 0.768 - - dynein, axonemal, heavy chain 14
37. FAM160A1 ENSGALG00000010090 10 0.768 - - - - - - - 0.768 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
38. GGT5 ENSGALG00000040504 24 0.768 - - - - - - - 0.768 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
39. BRI3BP ENSGALG00000002913 3 0.768 - - - - - - - 0.768 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
40. SOX8 ENSGALG00000005263 218 0.768 - - - - - - - 0.768 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
41. OTX2 ENSGALG00000034889 8 0.768 - - - - - - - 0.768 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
42. ENSGALG00000028298 ENSGALG00000028298 34 0.768 - - - - - - - 0.768 - -
43. CYBA ENSGALG00000029367 125 0.768 - - - - - - - 0.768 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
44. OCM2 ENSGALG00000003465 74 0.768 - - - - - - - 0.768 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
45. FADS1L1 ENSGALG00000020485 3 0.768 - - - - - - - 0.768 - - fatty acid desaturase 1-like 1
46. THRB ENSGALG00000011294 7 0.768 - - - - - - - 0.768 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
47. SPG20 22 0.768 - - - - - - - 0.768 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
48. SLC15A1 ENSGALG00000016884 10 0.768 - - - - - - - 0.768 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
49. LICOS LICOS 13 0.768 - - - - - - - 0.768 - -
50. ENSGALG00000028964 ENSGALG00000028964 46 0.768 - - - - - - - 0.768 - -
51. AMER3 ENSGALG00000041501 5 0.768 - - - - - - - 0.768 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
52. ENSGALG00000007388 ENSGALG00000007388 41 0.768 - - - - - - - 0.768 - -
53. SLC6A6 ENSGALG00000006425 31 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
54. SPINK6 ENSGALG00000032567 3 0.768 - - - - - - - 0.768 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
55. ADCY1 ENSGALG00000031170 4 0.768 - - - - - - - 0.768 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
56. BTBD10 ENSGALG00000005369 56 0.768 - - - - - - - 0.768 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
57. OSBPL3 ENSGALG00000011007 23 0.768 - - - - - - - 0.768 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
58. B2M ENSGALG00000002160 4 0.768 - - - - - - - 0.768 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
59. GRM3 ENSGALG00000006576 474 0.768 - - - - - - - 0.768 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
60. PPP1R36 ENSGALG00000040026 24 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
61. PYROXD2 ENSGALG00000007014 14 0.768 - - - - - - - 0.768 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
62. B3GNTL1 ENSGALG00000001433 22 0.768 - - - - - - - 0.768 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
63. STAR ENSGALG00000003242 4 0.768 - - - - - - - 0.768 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
64. ENSGALG00000016393 ENSGALG00000016393 3 0.768 - - - - - - - 0.768 - -
65. ENSGALG00000008047 ENSGALG00000008047 13 0.768 - - - - - - - 0.768 - -
66. MEIOB ENSGALG00000005411 6 0.768 - - - - - - - 0.768 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
67. UHRF1BP1L ENSGALG00000011557 17 0.768 - - - - - - - 0.768 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
68. gga-mir-6569 ENSGALG00000026551 10 0.768 - - - - - - - 0.768 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
69. IQSEC3 ENSGALG00000012975 4 0.768 - - - - - - - 0.768 - - IQ motif and Sec7 domain 3, transcript variant X5
70. ENSGALG00000027796 ENSGALG00000027796 7 0.768 - - - - - - - 0.768 - -
71. SLC20A1 ENSGALG00000013740 40 0.768 - - - - - - - 0.768 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
72. ENSGALG00000022661 ENSGALG00000022661 9 0.768 - - - - - - - 0.768 - -
73. SLC38A10 ENSGALG00000006880 34 0.768 - - - - - - - 0.768 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
74. EXOC6B ENSGALG00000016098 3 0.768 - - - - - - - 0.768 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
75. CBX2 ENSGALG00000023338 10 0.768 - - - - - - - 0.768 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
76. IL12RB1 28 0.768 - - - - - - - 0.768 - - interleukin 12 receptor subunit beta 1, transcript variant X4
77. CYP7B1 ENSGALG00000029435 3 0.768 - - - - - - - 0.768 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
78. MMP11 ENSGALG00000005968 3 0.768 - - - - - - - 0.768 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
79. ENSGALG00000010288 ENSGALG00000010288 3 0.768 - - - - - - - 0.768 - -
80. SLC6A11 ENSGALG00000004879 16 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
81. SLC39A12 ENSGALG00000008602 6 0.768 - - - - - - - 0.768 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
82. ADCY7 ENSGALG00000003837 10 0.768 - - - - - - - 0.768 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
83. TANC2 26 0.768 - - - - - - - 0.768 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
84. ZFYVE28 15 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 28, transcript variant X3
85. EIF4H ENSGALG00000001313 59 0.768 - - - - - - - 0.768 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
86. CPS1 ENSGALG00000002944 2 0.768 - - - - - - - 0.768 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
87. MUT ENSGALG00000016697 43 0.768 - - - - - - - 0.768 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
88. JADE1 ENSGALG00000010214 51 0.768 - - - - - - - 0.768 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
89. TNIP2 ENSGALG00000015666 28 0.768 - - - - - - - 0.768 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
90. MGAT3 ENSGALG00000036743 5 0.768 - - - - - - - 0.768 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
91. ATXN10 ENSGALG00000014234 16 0.768 - - - - - - - 0.768 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
92. ENSGALG00000026654 ENSGALG00000026654 10 0.768 - - - - - - - 0.768 - -
93. MAP2K1 ENSGALG00000007687 250 0.768 - - - - - - - 0.768 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
94. ENSGALG00000026925 ENSGALG00000026925 119 0.768 - - - - - - - 0.768 - -
95. HECA ENSGALG00000013824 14 0.768 - - - - - - - 0.768 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
96. E2F3 ENSGALG00000012680 21 0.768 - - - - - - - 0.768 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
97. ENSGALG00000001345 ENSGALG00000001345 5 0.768 - - - - - - - 0.768 - -
98. KNDC1 ENSGALG00000007007 31 0.768 - - - - - - - 0.768 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
99. MPV17L2 ENSGALG00000041429 168 0.768 - - - - - - - 0.768 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
100. RMST RMST 2 0.768 - - - - - - - 0.768 - -

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA