Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
4. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
5. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
6. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
7. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
12. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
13. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
14. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
15. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
16. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
17. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
18. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
19. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
20. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
21. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
22. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. MPV17L2 ENSGALG00000041429 168 0.768 - - - - - - - 0.768 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
27. ENSGALG00000007388 ENSGALG00000007388 41 0.768 - - - - - - - 0.768 - -
28. GABRG2 ENSGALG00000038042 211 0.768 - - - - - - - 0.768 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
29. SCN4B ENSGALG00000007409 22 0.768 - - - - - - - 0.768 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
30. ENSGALG00000010218 ENSGALG00000010218 12 0.768 - - - - - - - 0.768 - -
31. CKMT1A ENSGALG00000008352 44 0.768 - - - - - - - 0.768 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
32. UNC13B ENSGALG00000002165 3 0.768 - - - - - - - 0.768 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
33. CUBN ENSGALG00000008704 21 0.768 - - - - - - - 0.768 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
34. ENSGALG00000028964 ENSGALG00000028964 46 0.768 - - - - - - - 0.768 - -
35. gga-mir-218-1 ENSGALG00000018327 3 0.768 - - - - - - - 0.768 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
36. ENSGALG00000027796 ENSGALG00000027796 7 0.768 - - - - - - - 0.768 - -
37. CYBA ENSGALG00000029367 125 0.768 - - - - - - - 0.768 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
38. EXOC6B ENSGALG00000016098 3 0.768 - - - - - - - 0.768 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
39. TIMP4 ENSGALG00000004969 21 0.768 - - - - - - - 0.768 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
40. C1H7ORF60 C1H7ORF60 3 0.768 - - - - - - - 0.768 - -
41. TNIP2 ENSGALG00000015666 28 0.768 - - - - - - - 0.768 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
42. GTF2A1L ENSGALG00000026747 13 0.768 - - - - - - - 0.768 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
43. SLC39A12 ENSGALG00000008602 6 0.768 - - - - - - - 0.768 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
44. SKI ENSGALG00000001229 50 0.768 - - - - - - - 0.768 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
45. ROS1 ENSGALG00000014913 7 0.768 - - - - - - - 0.768 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
46. SMTN 18 0.768 - - - - - - - 0.768 - - smoothelin, transcript variant X2
47. LOC100857820 ENSGALG00000001824 16 0.768 - - - - - - - 0.768 - - uncharacterized LOC100857820
48. ENSGALG00000010288 ENSGALG00000010288 3 0.768 - - - - - - - 0.768 - -
49. RNF17 ENSGALG00000045414 2 0.768 - - - - - - - 0.768 - - ring finger protein 17, transcript variant X2
50. NLGN4 NLGN4 283 0.768 - - - - - - - 0.768 - -
51. GDPD4 ENSGALG00000000690 824 0.768 - - - - - - - 0.768 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
52. OCM2 ENSGALG00000003465 74 0.768 - - - - - - - 0.768 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
53. HK3 ENSGALG00000027287 20 0.768 - - - - - - - 0.768 - - hexokinase 3, transcript variant X3
54. ATXN10 ENSGALG00000014234 16 0.768 - - - - - - - 0.768 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
55. SNORA44 SNORA44 29 0.768 - - - - - - - 0.768 - -
56. LAMC1 ENSGALG00000004620 11 0.768 - - - - - - - 0.768 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
57. FAM124A ENSGALG00000017016 0 0.768 - - - - - - - 0.768 - - family with sequence similarity 124 member A [Source:HGNC Symbol;Acc:HGNC:26413]
58. TMSB10 TMSB10 518 0.768 - - - - - - - 0.768 - -
59. SLC15A1 ENSGALG00000016884 10 0.768 - - - - - - - 0.768 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
60. KLHL40 ENSGALG00000005292 61 0.768 - - - - - - - 0.768 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
61. FADS6 ENSGALG00000029445 12 0.768 - - - - - - - 0.768 - - fatty acid desaturase 6 [Source:HGNC Symbol;Acc:HGNC:30459]
62. SCG5 ENSGALG00000009725 10 0.768 - - - - - - - 0.768 - - secretogranin V [Source:NCBI gene;Acc:769742]
63. LOC395991 ENSGALG00000006944 103 0.768 - - - - - - - 0.768 - - crescent, transcript variant X1
64. MAP2K1 ENSGALG00000007687 250 0.768 - - - - - - - 0.768 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
65. SH3GL3 ENSGALG00000006045 12 0.768 - - - - - - - 0.768 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
66. PPP1R36 ENSGALG00000040026 24 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
67. CD99L2 ENSGALG00000009075 5 0.768 - - - - - - - 0.768 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
68. UNCX ENSGALG00000039292 165 0.768 - - - - - - - 0.768 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
69. FOXG1 ENSGALG00000036364 29 0.768 - - - - - - - 0.768 - - forkhead box G1 [Source:NCBI gene;Acc:396110]
70. UHRF1BP1L ENSGALG00000011557 17 0.768 - - - - - - - 0.768 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
71. CCDC181 ENSGALG00000015221 10 0.768 - - - - - - - 0.768 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
72. IL12RB1 28 0.768 - - - - - - - 0.768 - - interleukin 12 receptor subunit beta 1, transcript variant X4
73. UPK3B 4 0.768 - - - - - - - 0.768 - - uroplakin 3B
74. ENSGALG00000014605 ENSGALG00000014605 1 0.768 - - - - - - - 0.768 - -
75. SPIDR SPIDR 19 0.768 - - - - - - - 0.768 - -
76. IL18R1 ENSGALG00000040621 12 0.768 - - - - - - - 0.768 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
77. HECA ENSGALG00000013824 14 0.768 - - - - - - - 0.768 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
78. CSRP3 ENSGALG00000004044 456 0.768 - - - - - - - 0.768 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
79. ENSGALG00000005482 ENSGALG00000005482 1 0.768 - - - - - - - 0.768 - -
80. ENSGALG00000001138 ENSGALG00000001138 21 0.768 - - - - - - - 0.768 - -
81. ENSGALG00000016393 ENSGALG00000016393 3 0.768 - - - - - - - 0.768 - -
82. TSGA10 ENSGALG00000016757 4 0.768 - - - - - - - 0.768 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
83. DENND5A ENSGALG00000005840 54 0.768 - - - - - - - 0.768 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
84. TMEM204 ENSGALG00000029047 8 0.768 - - - - - - - 0.768 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
85. TNFRSF13B ENSGALG00000024122 0 0.768 - - - - - - - 0.768 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
86. GLRA2 ENSGALG00000016571 10 0.768 - - - - - - - 0.768 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
87. DSCAM ENSGALG00000016138 16 0.768 - - - - - - - 0.768 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
88. CFTII CFTII 6 0.768 - - - - - - - 0.768 - -
89. PPIL6 ENSGALG00000015237 11 0.768 - - - - - - - 0.768 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
90. CERKL ENSGALG00000008910 70 0.768 - - - - - - - 0.768 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
91. ZFYVE28 15 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 28, transcript variant X3
92. ADCY1 ENSGALG00000031170 4 0.768 - - - - - - - 0.768 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
93. B2M ENSGALG00000002160 4 0.768 - - - - - - - 0.768 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
94. RBM15 ENSGALG00000000401 22 0.768 - - - - - - - 0.768 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
95. HPGD ENSGALG00000010769 5 0.768 - - - - - - - 0.768 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
96. ENSGALG00000008047 ENSGALG00000008047 13 0.768 - - - - - - - 0.768 - -
97. PYROXD2 ENSGALG00000007014 14 0.768 - - - - - - - 0.768 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
98. LICOS LICOS 13 0.768 - - - - - - - 0.768 - -
99. ZNF22 ZNF22 25 0.768 - - - - - - - 0.768 - -
100. GRM3 ENSGALG00000006576 474 0.768 - - - - - - - 0.768 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA