Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
4. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
5. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
6. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
7. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
12. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
13. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
14. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
15. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
16. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
17. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
18. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
19. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
20. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
21. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
22. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. UNC13B ENSGALG00000002165 3 0.768 - - - - - - - 0.768 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
27. ADCK3 ADCK3 110 0.768 - - - - - - - 0.768 - -
28. UNCX ENSGALG00000039292 165 0.768 - - - - - - - 0.768 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
29. KIAA0319L ENSGALG00000002445 75 0.768 - - - - - - - 0.768 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
30. CCNT2 ENSGALG00000012207 14 0.768 - - - - - - - 0.768 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
31. VIT ENSGALG00000010583 16 0.768 - - - - - - - 0.768 - - vitrin [Source:NCBI gene;Acc:421471]
32. CD40 ENSGALG00000007015 7 0.768 - - - - - - - 0.768 - - CD40 molecule [Source:NCBI gene;Acc:395385]
33. CFTII CFTII 6 0.768 - - - - - - - 0.768 - -
34. NPBWR1 ENSGALG00000015261 6 0.768 - - - - - - - 0.768 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
35. DTX4 ENSGALG00000010835 25 0.768 - - - - - - - 0.768 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
36. LOC395991 ENSGALG00000006944 103 0.768 - - - - - - - 0.768 - - crescent, transcript variant X1
37. UPK3B 4 0.768 - - - - - - - 0.768 - - uroplakin 3B
38. TCF20 ENSGALG00000011878 69 0.768 - - - - - - - 0.768 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
39. CCDC181 ENSGALG00000015221 10 0.768 - - - - - - - 0.768 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
40. B3GALT6 ENSGALG00000001859 5 0.768 - - - - - - - 0.768 - - beta-1,3-galactosyltransferase 6
41. TNMD ENSGALG00000006821 19 0.768 - - - - - - - 0.768 - - tenomodulin [Source:NCBI gene;Acc:404530]
42. GDPD4 ENSGALG00000000690 824 0.768 - - - - - - - 0.768 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
43. KIAA1199 KIAA1199 6 0.768 - - - - - - - 0.768 - -
44. RASSF6 ENSGALG00000011664 7 0.768 - - - - - - - 0.768 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
45. FLT4 ENSGALG00000005802 5 0.768 - - - - - - - 0.768 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
46. CTRB2 ENSGALG00000000038 6 0.768 - - - - - - - 0.768 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
47. PPP1R1B ENSGALG00000044406 6 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
48. DSCAM ENSGALG00000016138 16 0.768 - - - - - - - 0.768 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
49. NMNAT3 ENSGALG00000026187 11 0.768 - - - - - - - 0.768 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
50. LOC100857820 ENSGALG00000001824 16 0.768 - - - - - - - 0.768 - - uncharacterized LOC100857820
51. RBM15 ENSGALG00000000401 22 0.768 - - - - - - - 0.768 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
52. TNFRSF13B ENSGALG00000024122 0 0.768 - - - - - - - 0.768 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
53. BMPR1A ENSGALG00000002003 20 0.768 - - - - - - - 0.768 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
54. LRP6 ENSGALG00000031503 39 0.768 - - - - - - - 0.768 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
55. TSGA10 ENSGALG00000016757 4 0.768 - - - - - - - 0.768 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
56. gga-mir-6659 ENSGALG00000028216 6 0.768 - - - - - - - 0.768 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
57. GLRA2 ENSGALG00000016571 10 0.768 - - - - - - - 0.768 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
58. ENSGALG00000004157 ENSGALG00000004157 1 0.768 - - - - - - - 0.768 - -
59. ENSGALG00000028340 ENSGALG00000028340 31 0.768 - - - - - - - 0.768 - -
60. NME8 ENSGALG00000029677 2 0.768 - - - - - - - 0.768 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
61. CYR61 ENSGALG00000008661 43 0.768 - - - - - - - 0.768 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
62. RGS13 ENSGALG00000026810 8 0.768 - - - - - - - 0.768 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
63. RBM43 ENSGALG00000012479 5 0.768 - - - - - - - 0.768 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
64. TMSB10 TMSB10 518 0.768 - - - - - - - 0.768 - -
65. MAP2K1 ENSGALG00000007687 250 0.768 - - - - - - - 0.768 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
66. ENSGALG00000026925 ENSGALG00000026925 119 0.768 - - - - - - - 0.768 - -
67. ENSGALG00000026654 ENSGALG00000026654 10 0.768 - - - - - - - 0.768 - -
68. HECA ENSGALG00000013824 14 0.768 - - - - - - - 0.768 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
69. MUT ENSGALG00000016697 43 0.768 - - - - - - - 0.768 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
70. CPS1 ENSGALG00000002944 2 0.768 - - - - - - - 0.768 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
71. ATXN10 ENSGALG00000014234 16 0.768 - - - - - - - 0.768 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
72. JADE1 ENSGALG00000010214 51 0.768 - - - - - - - 0.768 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
73. MGAT3 ENSGALG00000036743 5 0.768 - - - - - - - 0.768 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
74. TNIP2 ENSGALG00000015666 28 0.768 - - - - - - - 0.768 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
75. MPV17L2 ENSGALG00000041429 168 0.768 - - - - - - - 0.768 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
76. RMST RMST 2 0.768 - - - - - - - 0.768 - -
77. ENSGALG00000001345 ENSGALG00000001345 5 0.768 - - - - - - - 0.768 - -
78. E2F3 ENSGALG00000012680 21 0.768 - - - - - - - 0.768 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
79. KNDC1 ENSGALG00000007007 31 0.768 - - - - - - - 0.768 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
80. CBX2 ENSGALG00000023338 10 0.768 - - - - - - - 0.768 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
81. IL12RB1 28 0.768 - - - - - - - 0.768 - - interleukin 12 receptor subunit beta 1, transcript variant X4
82. EXOC6B ENSGALG00000016098 3 0.768 - - - - - - - 0.768 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
83. TANC2 26 0.768 - - - - - - - 0.768 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
84. ADCY7 ENSGALG00000003837 10 0.768 - - - - - - - 0.768 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
85. ZFYVE28 15 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 28, transcript variant X3
86. EIF4H ENSGALG00000001313 59 0.768 - - - - - - - 0.768 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
87. MMP11 ENSGALG00000005968 3 0.768 - - - - - - - 0.768 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
88. CYP7B1 ENSGALG00000029435 3 0.768 - - - - - - - 0.768 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
89. SLC6A11 ENSGALG00000004879 16 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
90. ENSGALG00000010288 ENSGALG00000010288 3 0.768 - - - - - - - 0.768 - -
91. SLC39A12 ENSGALG00000008602 6 0.768 - - - - - - - 0.768 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
92. B3GNTL1 ENSGALG00000001433 22 0.768 - - - - - - - 0.768 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
93. STAR ENSGALG00000003242 4 0.768 - - - - - - - 0.768 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
94. PYROXD2 ENSGALG00000007014 14 0.768 - - - - - - - 0.768 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
95. ENSGALG00000008047 ENSGALG00000008047 13 0.768 - - - - - - - 0.768 - -
96. MEIOB ENSGALG00000005411 6 0.768 - - - - - - - 0.768 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
97. ENSGALG00000016393 ENSGALG00000016393 3 0.768 - - - - - - - 0.768 - -
98. B2M ENSGALG00000002160 4 0.768 - - - - - - - 0.768 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
99. PPP1R36 ENSGALG00000040026 24 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
100. GRM3 ENSGALG00000006576 474 0.768 - - - - - - - 0.768 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA