Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
4. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
5. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
6. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
7. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
12. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
13. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
14. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
15. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
16. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
17. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
18. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
19. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
20. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
21. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
22. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. TMEM72 ENSGALG00000026808 5 0.768 - - - - - - - 0.768 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
27. APOD ENSGALG00000006995 2 0.768 - - - - - - - 0.768 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
28. TLL2 ENSGALG00000005519 10 0.768 - - - - - - - 0.768 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
29. FOXI1 ENSGALG00000002105 0 0.768 - - - - - - - 0.768 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
30. TSGA10 ENSGALG00000016757 4 0.768 - - - - - - - 0.768 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
31. TNMD ENSGALG00000006821 19 0.768 - - - - - - - 0.768 - - tenomodulin [Source:NCBI gene;Acc:404530]
32. CFD ENSGALG00000040832 222 0.768 - - - - - - - 0.768 - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
33. DMGDH ENSGALG00000004491 15 0.768 - - - - - - - 0.768 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
34. SKI ENSGALG00000001229 50 0.768 - - - - - - - 0.768 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
35. NME8 ENSGALG00000029677 2 0.768 - - - - - - - 0.768 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
36. KIAA1199 KIAA1199 6 0.768 - - - - - - - 0.768 - -
37. SLC15A1 ENSGALG00000016884 10 0.768 - - - - - - - 0.768 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
38. UPK3B 4 0.768 - - - - - - - 0.768 - - uroplakin 3B
39. MUT ENSGALG00000016697 43 0.768 - - - - - - - 0.768 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
40. CBLN1 ENSGALG00000042664 15 0.768 - - - - - - - 0.768 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
41. NMNAT3 ENSGALG00000026187 11 0.768 - - - - - - - 0.768 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
42. FRMD4A ENSGALG00000034992 6 0.768 - - - - - - - 0.768 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
43. PPP1R1B ENSGALG00000044406 6 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
44. SLC6A20 ENSGALG00000039333 1 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
45. DENND5A ENSGALG00000005840 54 0.768 - - - - - - - 0.768 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
46. OCM2 ENSGALG00000003465 74 0.768 - - - - - - - 0.768 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
47. CRYBA2 ENSGALG00000011354 14 0.768 - - - - - - - 0.768 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
48. ENSGALG00000022967 ENSGALG00000022967 240 0.768 - - - - - - - 0.768 - -
49. RADIL ENSGALG00000004504 0 0.768 - - - - - - - 0.768 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
50. ZFYVE28 15 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 28, transcript variant X3
51. GDPD4 ENSGALG00000000690 824 0.768 - - - - - - - 0.768 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
52. WDR52 WDR52 37 0.768 - - - - - - - 0.768 - -
53. SLC38A10 ENSGALG00000006880 34 0.768 - - - - - - - 0.768 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
54. ENSGALG00000010218 ENSGALG00000010218 12 0.768 - - - - - - - 0.768 - -
55. SLC6A4 ENSGALG00000004246 5 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
56. ENSGALG00000019324 ENSGALG00000019324 0 0.768 - - - - - - - 0.768 - -
57. ENSGALG00000001345 ENSGALG00000001345 5 0.768 - - - - - - - 0.768 - -
58. BTG4 ENSGALG00000007618 2 0.768 - - - - - - - 0.768 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
59. BTBD10 ENSGALG00000005369 56 0.768 - - - - - - - 0.768 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
60. HK3 ENSGALG00000027287 20 0.768 - - - - - - - 0.768 - - hexokinase 3, transcript variant X3
61. MYO1D ENSGALG00000000674 14 0.768 - - - - - - - 0.768 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
62. CBR4 ENSGALG00000009714 7 0.768 - - - - - - - 0.768 - - carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
63. ID3 ENSGALG00000035317 52 0.768 - - - - - - - 0.768 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
64. ENSGALG00000028964 ENSGALG00000028964 46 0.768 - - - - - - - 0.768 - -
65. PHC2 62 0.768 - - - - - - - 0.768 - - polyhomeotic homolog 2
66. BRI3BP ENSGALG00000002913 3 0.768 - - - - - - - 0.768 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
67. SLC6A6 ENSGALG00000006425 31 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
68. TRIM3 ENSGALG00000034004 110 0.768 - - - - - - - 0.768 - - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
69. DDTNFR23 ENSGALG00000006407 4 0.768 - - - - - - - 0.768 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
70. gga-mir-218-1 ENSGALG00000018327 3 0.768 - - - - - - - 0.768 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
71. NLGN4 NLGN4 283 0.768 - - - - - - - 0.768 - -
72. RNF17 ENSGALG00000045414 2 0.768 - - - - - - - 0.768 - - ring finger protein 17, transcript variant X2
73. GGT5 ENSGALG00000040504 24 0.768 - - - - - - - 0.768 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
74. LRCH1 ENSGALG00000016990 17 0.768 - - - - - - - 0.768 - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
75. PAPPA ENSGALG00000007079 6 0.768 - - - - - - - 0.768 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
76. OSBPL3 ENSGALG00000011007 23 0.768 - - - - - - - 0.768 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
77. SPINK6 ENSGALG00000032567 3 0.768 - - - - - - - 0.768 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
78. ALG12 ENSGALG00000008539 20 0.768 - - - - - - - 0.768 - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
79. SH3GL3 ENSGALG00000006045 12 0.768 - - - - - - - 0.768 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
80. KNDC1 ENSGALG00000007007 31 0.768 - - - - - - - 0.768 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
81. SLC20A1 ENSGALG00000013740 40 0.768 - - - - - - - 0.768 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
82. SEC16B ENSGALG00000004424 4 0.768 - - - - - - - 0.768 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
83. CPS1 ENSGALG00000002944 2 0.768 - - - - - - - 0.768 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
84. LOC395991 ENSGALG00000006944 103 0.768 - - - - - - - 0.768 - - crescent, transcript variant X1
85. PPP1R36 ENSGALG00000040026 24 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
86. JADE1 ENSGALG00000010214 51 0.768 - - - - - - - 0.768 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
87. LRP6 ENSGALG00000031503 39 0.768 - - - - - - - 0.768 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
88. SUSD5 ENSGALG00000042289 1 0.768 - - - - - - - 0.768 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
89. ING1 ENSGALG00000016849 89 0.768 - - - - - - - 0.768 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
90. RGS13 ENSGALG00000026810 8 0.768 - - - - - - - 0.768 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
91. GLRA2 ENSGALG00000016571 10 0.768 - - - - - - - 0.768 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
92. SCG5 ENSGALG00000009725 10 0.768 - - - - - - - 0.768 - - secretogranin V [Source:NCBI gene;Acc:769742]
93. ADAMTS8 ENSGALG00000001370 0 0.768 - - - - - - - 0.768 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
94. ADCY7 ENSGALG00000003837 10 0.768 - - - - - - - 0.768 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
95. ENSGALG00000014605 ENSGALG00000014605 1 0.768 - - - - - - - 0.768 - -
96. SLC6A11 ENSGALG00000004879 16 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
97. COG3 ENSGALG00000016980 15 0.768 - - - - - - - 0.768 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
98. COTL1 ENSGALG00000017644 81 0.768 - - - - - - - 0.768 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
99. ENSGALG00000026654 ENSGALG00000026654 10 0.768 - - - - - - - 0.768 - -
100. CCNT2 ENSGALG00000012207 14 0.768 - - - - - - - 0.768 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA