Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
4. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
5. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
6. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
7. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
12. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
13. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
14. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
15. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
16. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
17. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
18. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
19. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
20. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
21. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
22. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. ENSGALG00000028298 ENSGALG00000028298 34 0.768 - - - - - - - 0.768 - -
27. OTX2 ENSGALG00000034889 8 0.768 - - - - - - - 0.768 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
28. FADS1L1 ENSGALG00000020485 3 0.768 - - - - - - - 0.768 - - fatty acid desaturase 1-like 1
29. BMPR1A ENSGALG00000002003 20 0.768 - - - - - - - 0.768 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
30. TLL2 ENSGALG00000005519 10 0.768 - - - - - - - 0.768 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
31. ZNF22 ZNF22 25 0.768 - - - - - - - 0.768 - -
32. MYLK2 ENSGALG00000006273 5 0.768 - - - - - - - 0.768 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
33. TNIP2 ENSGALG00000015666 28 0.768 - - - - - - - 0.768 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
34. ADCK3 ADCK3 110 0.768 - - - - - - - 0.768 - -
35. SLC6A11 ENSGALG00000004879 16 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
36. ENSGALG00000029114 ENSGALG00000029114 4 0.768 - - - - - - - 0.768 - -
37. BAFF BAFF 40 0.768 - - - - - - - 0.768 - -
38. RNF17 ENSGALG00000045414 2 0.768 - - - - - - - 0.768 - - ring finger protein 17, transcript variant X2
39. ZFYVE28 15 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 28, transcript variant X3
40. CKMT1A ENSGALG00000008352 44 0.768 - - - - - - - 0.768 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
41. FRMD4A ENSGALG00000034992 6 0.768 - - - - - - - 0.768 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
42. RADIL ENSGALG00000004504 0 0.768 - - - - - - - 0.768 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
43. UNC13B ENSGALG00000002165 3 0.768 - - - - - - - 0.768 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
44. ANKRD31 46 0.768 - - - - - - - 0.768 - - ankyrin repeat domain 31, transcript variant X2
45. CUBN ENSGALG00000008704 21 0.768 - - - - - - - 0.768 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
46. RBKS ENSGALG00000010043 3 0.768 - - - - - - - 0.768 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
47. EIF4H ENSGALG00000001313 59 0.768 - - - - - - - 0.768 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
48. ROS1 ENSGALG00000014913 7 0.768 - - - - - - - 0.768 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
49. MMP27 ENSGALG00000019060 19 0.768 - - - - - - - 0.768 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]
50. DTX4 ENSGALG00000010835 25 0.768 - - - - - - - 0.768 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
51. ADCY7 ENSGALG00000003837 10 0.768 - - - - - - - 0.768 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
52. GLRA2 ENSGALG00000016571 10 0.768 - - - - - - - 0.768 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
53. SPG20 22 0.768 - - - - - - - 0.768 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
54. PICALM ENSGALG00000039037 57 0.768 - - - - - - - 0.768 - - phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:HGNC:15514]
55. ENSGALG00000010218 ENSGALG00000010218 12 0.768 - - - - - - - 0.768 - -
56. CBLN1 ENSGALG00000042664 15 0.768 - - - - - - - 0.768 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
57. RGS13 ENSGALG00000026810 8 0.768 - - - - - - - 0.768 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
58. MMP11 ENSGALG00000005968 3 0.768 - - - - - - - 0.768 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
59. CCDC181 ENSGALG00000015221 10 0.768 - - - - - - - 0.768 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
60. CPS1 ENSGALG00000002944 2 0.768 - - - - - - - 0.768 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
61. IL12RB1 28 0.768 - - - - - - - 0.768 - - interleukin 12 receptor subunit beta 1, transcript variant X4
62. ENSGALG00000010288 ENSGALG00000010288 3 0.768 - - - - - - - 0.768 - -
63. DDTNFR23 ENSGALG00000006407 4 0.768 - - - - - - - 0.768 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
64. KNDC1 ENSGALG00000007007 31 0.768 - - - - - - - 0.768 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
65. TIMP4 ENSGALG00000004969 21 0.768 - - - - - - - 0.768 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
66. NIM1 NIM1 18 0.768 - - - - - - - 0.768 - -
67. BRI3BP ENSGALG00000002913 3 0.768 - - - - - - - 0.768 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
68. TRAF6 ENSGALG00000007932 12 0.768 - - - - - - - 0.768 - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
69. KCNK16 ENSGALG00000020049 0 0.768 - - - - - - - 0.768 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
70. CREB3L1 ENSGALG00000008393 3 0.768 - - - - - - - 0.768 - - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
71. TANC2 26 0.768 - - - - - - - 0.768 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
72. CCNT2 ENSGALG00000012207 14 0.768 - - - - - - - 0.768 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
73. CD40 ENSGALG00000007015 7 0.768 - - - - - - - 0.768 - - CD40 molecule [Source:NCBI gene;Acc:395385]
74. UHRF1BP1L ENSGALG00000011557 17 0.768 - - - - - - - 0.768 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
75. ENSGALG00000022661 ENSGALG00000022661 9 0.768 - - - - - - - 0.768 - -
76. PYROXD2 ENSGALG00000007014 14 0.768 - - - - - - - 0.768 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
77. LRP6 ENSGALG00000031503 39 0.768 - - - - - - - 0.768 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
78. DNAH14 ENSGALG00000045078 1 0.768 - - - - - - - 0.768 - - dynein, axonemal, heavy chain 14
79. ALG12 ENSGALG00000008539 20 0.768 - - - - - - - 0.768 - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
80. MUT ENSGALG00000016697 43 0.768 - - - - - - - 0.768 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
81. AOC1 13 0.768 - - - - - - - 0.768 - - amine oxidase, copper containing 1, transcript variant X2
82. CFD ENSGALG00000040832 222 0.768 - - - - - - - 0.768 - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
83. FAM160A1 ENSGALG00000010090 10 0.768 - - - - - - - 0.768 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
84. USP19 ENSGALG00000006824 44 0.768 - - - - - - - 0.768 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
85. C12orf55 C12orf55 0 0.768 - - - - - - - 0.768 - -
86. ENSGALG00000029127 ENSGALG00000029127 2 0.768 - - - - - - - 0.768 - -
87. KIAA0319L ENSGALG00000002445 75 0.768 - - - - - - - 0.768 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
88. TPH1 ENSGALG00000006236 21 0.768 - - - - - - - 0.768 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
89. PTPRO ENSGALG00000013085 26 0.768 - - - - - - - 0.768 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
90. CFTII CFTII 6 0.768 - - - - - - - 0.768 - -
91. OSBPL3 ENSGALG00000011007 23 0.768 - - - - - - - 0.768 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
92. UNCX ENSGALG00000039292 165 0.768 - - - - - - - 0.768 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
93. TNMD ENSGALG00000006821 19 0.768 - - - - - - - 0.768 - - tenomodulin [Source:NCBI gene;Acc:404530]
94. ID3 ENSGALG00000035317 52 0.768 - - - - - - - 0.768 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
95. IQSEC3 ENSGALG00000012975 4 0.768 - - - - - - - 0.768 - - IQ motif and Sec7 domain 3, transcript variant X5
96. gga-mir-6569 ENSGALG00000026551 10 0.768 - - - - - - - 0.768 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
97. CRYBA2 ENSGALG00000011354 14 0.768 - - - - - - - 0.768 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
98. COTL1 ENSGALG00000017644 81 0.768 - - - - - - - 0.768 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
99. FHDC1 ENSGALG00000041054 34 0.768 - - - - - - - 0.768 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
100. CLDN15 ENSGALG00000038964 21 0.768 - - - - - - - 0.768 - - claudin 15, transcript variant X4

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA