Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
4. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
5. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
6. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
7. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
12. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
13. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
14. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
15. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
16. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
17. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
18. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
19. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
20. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
21. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
22. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. COTL1 ENSGALG00000017644 81 0.768 - - - - - - - 0.768 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
27. FHDC1 ENSGALG00000041054 34 0.768 - - - - - - - 0.768 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
28. IQSEC3 ENSGALG00000012975 4 0.768 - - - - - - - 0.768 - - IQ motif and Sec7 domain 3, transcript variant X5
29. gga-mir-6569 ENSGALG00000026551 10 0.768 - - - - - - - 0.768 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
30. CRYBA2 ENSGALG00000011354 14 0.768 - - - - - - - 0.768 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
31. ID3 ENSGALG00000035317 52 0.768 - - - - - - - 0.768 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
32. UNCX ENSGALG00000039292 165 0.768 - - - - - - - 0.768 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
33. TNMD ENSGALG00000006821 19 0.768 - - - - - - - 0.768 - - tenomodulin [Source:NCBI gene;Acc:404530]
34. CFTII CFTII 6 0.768 - - - - - - - 0.768 - -
35. OSBPL3 ENSGALG00000011007 23 0.768 - - - - - - - 0.768 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
36. PTPRO ENSGALG00000013085 26 0.768 - - - - - - - 0.768 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
37. TPH1 ENSGALG00000006236 21 0.768 - - - - - - - 0.768 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
38. USP19 ENSGALG00000006824 44 0.768 - - - - - - - 0.768 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
39. C12orf55 C12orf55 0 0.768 - - - - - - - 0.768 - -
40. ENSGALG00000029127 ENSGALG00000029127 2 0.768 - - - - - - - 0.768 - -
41. KIAA0319L ENSGALG00000002445 75 0.768 - - - - - - - 0.768 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
42. CFD ENSGALG00000040832 222 0.768 - - - - - - - 0.768 - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
43. FAM160A1 ENSGALG00000010090 10 0.768 - - - - - - - 0.768 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
44. BTBD10 ENSGALG00000005369 56 0.768 - - - - - - - 0.768 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
45. LOC395991 ENSGALG00000006944 103 0.768 - - - - - - - 0.768 - - crescent, transcript variant X1
46. ADPRHL1 ENSGALG00000016826 133 0.768 - - - - - - - 0.768 - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
47. AMER3 ENSGALG00000041501 5 0.768 - - - - - - - 0.768 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
48. HPGD ENSGALG00000010769 5 0.768 - - - - - - - 0.768 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
49. MAP2K1 ENSGALG00000007687 250 0.768 - - - - - - - 0.768 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
50. MPV17L2 ENSGALG00000041429 168 0.768 - - - - - - - 0.768 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
51. FAM124A ENSGALG00000017016 0 0.768 - - - - - - - 0.768 - - family with sequence similarity 124 member A [Source:HGNC Symbol;Acc:HGNC:26413]
52. ENSGALG00000008047 ENSGALG00000008047 13 0.768 - - - - - - - 0.768 - -
53. FOXG1 ENSGALG00000036364 29 0.768 - - - - - - - 0.768 - - forkhead box G1 [Source:NCBI gene;Acc:396110]
54. SLC20A1 ENSGALG00000013740 40 0.768 - - - - - - - 0.768 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
55. CLDN15 ENSGALG00000038964 21 0.768 - - - - - - - 0.768 - - claudin 15, transcript variant X4
56. RFX4 ENSGALG00000012647 119 0.768 - - - - - - - 0.768 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
57. CSRP3 ENSGALG00000004044 456 0.768 - - - - - - - 0.768 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
58. gga-mir-6659 ENSGALG00000028216 6 0.768 - - - - - - - 0.768 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
59. CERKL ENSGALG00000008910 70 0.768 - - - - - - - 0.768 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
60. GABRG2 ENSGALG00000038042 211 0.768 - - - - - - - 0.768 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
61. TERF2IP ENSGALG00000000903 41 0.768 - - - - - - - 0.768 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
62. THRB ENSGALG00000011294 7 0.768 - - - - - - - 0.768 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
63. SCN4B ENSGALG00000007409 22 0.768 - - - - - - - 0.768 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
64. ABCG1 ENSGALG00000016164 10 0.768 - - - - - - - 0.768 - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
65. RBM15 ENSGALG00000000401 22 0.768 - - - - - - - 0.768 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
66. FLT4 ENSGALG00000005802 5 0.768 - - - - - - - 0.768 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
67. WDR90_1 ENSGALG00000028172 2 0.768 - - - - - - - 0.768 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
68. BTG4 ENSGALG00000007618 2 0.768 - - - - - - - 0.768 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
69. ENSGALG00000019324 ENSGALG00000019324 0 0.768 - - - - - - - 0.768 - -
70. EPSTI1 ENSGALG00000016964 6 0.768 - - - - - - - 0.768 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
71. MYO1D ENSGALG00000000674 14 0.768 - - - - - - - 0.768 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
72. ENSGALG00000001345 ENSGALG00000001345 5 0.768 - - - - - - - 0.768 - -
73. SMTN 18 0.768 - - - - - - - 0.768 - - smoothelin, transcript variant X2
74. SLC6A6 ENSGALG00000006425 31 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
75. SUSD5 ENSGALG00000042289 1 0.768 - - - - - - - 0.768 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
76. MECR ENSGALG00000032763 110 0.768 - - - - - - - 0.768 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
77. B3GNTL1 ENSGALG00000001433 22 0.768 - - - - - - - 0.768 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
78. ING1 ENSGALG00000016849 89 0.768 - - - - - - - 0.768 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
79. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 0.768 - - - - - - - 0.768 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
80. BLB1 ENSGALG00000000141 13 0.768 - - - - - - - 0.768 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
81. ENSGALG00000012391 ENSGALG00000012391 0 0.768 - - - - - - - 0.768 - -
82. PEX5 ENSGALG00000014683 17 0.768 - - - - - - - 0.768 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
83. RAI1 ENSGALG00000004888 14 0.768 - - - - - - - 0.768 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
84. EXOC6B ENSGALG00000016098 3 0.768 - - - - - - - 0.768 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
85. CREB3 ENSGALG00000002523 23 0.768 - - - - - - - 0.768 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
86. ENSGALG00000027796 ENSGALG00000027796 7 0.768 - - - - - - - 0.768 - -
87. ADCY1 ENSGALG00000031170 4 0.768 - - - - - - - 0.768 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
88. SLC6A4 ENSGALG00000004246 5 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
89. ACKR2 ENSGALG00000005305 0 0.768 - - - - - - - 0.768 - - atypical chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1565]
90. GGT5 ENSGALG00000040504 24 0.768 - - - - - - - 0.768 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
91. ANKRD31 46 0.768 - - - - - - - 0.768 - - ankyrin repeat domain 31, transcript variant X2
92. CKMT1A ENSGALG00000008352 44 0.768 - - - - - - - 0.768 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
93. FRMD4A ENSGALG00000034992 6 0.768 - - - - - - - 0.768 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
94. RADIL ENSGALG00000004504 0 0.768 - - - - - - - 0.768 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
95. UNC13B ENSGALG00000002165 3 0.768 - - - - - - - 0.768 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
96. BAFF BAFF 40 0.768 - - - - - - - 0.768 - -
97. ZFYVE28 15 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 28, transcript variant X3
98. RNF17 ENSGALG00000045414 2 0.768 - - - - - - - 0.768 - - ring finger protein 17, transcript variant X2
99. SLC6A11 ENSGALG00000004879 16 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
100. ENSGALG00000029114 ENSGALG00000029114 4 0.768 - - - - - - - 0.768 - -

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA