Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
4. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
5. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
6. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
7. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
12. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
13. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
14. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
15. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
16. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
17. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
18. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
19. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
20. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
21. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
22. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. STAR ENSGALG00000003242 4 0.768 - - - - - - - 0.768 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
27. TANC2 26 0.768 - - - - - - - 0.768 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
28. FAM160A1 ENSGALG00000010090 10 0.768 - - - - - - - 0.768 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
29. ENSGALG00000029127 ENSGALG00000029127 2 0.768 - - - - - - - 0.768 - -
30. STMN2 ENSGALG00000039690 989 0.768 - - - - - - - 0.768 - - stathmin 2 [Source:NCBI gene;Acc:396095]
31. SCN4B ENSGALG00000007409 22 0.768 - - - - - - - 0.768 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
32. CD99L2 ENSGALG00000009075 5 0.768 - - - - - - - 0.768 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
33. ENSGALG00000028340 ENSGALG00000028340 31 0.768 - - - - - - - 0.768 - -
34. ENSGALG00000027796 ENSGALG00000027796 7 0.768 - - - - - - - 0.768 - -
35. SPOCK3 ENSGALG00000009568 33 0.768 - - - - - - - 0.768 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
36. IL12RB1 28 0.768 - - - - - - - 0.768 - - interleukin 12 receptor subunit beta 1, transcript variant X4
37. CSRP3 ENSGALG00000004044 456 0.768 - - - - - - - 0.768 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
38. B2M ENSGALG00000002160 4 0.768 - - - - - - - 0.768 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
39. CLDN15 ENSGALG00000038964 21 0.768 - - - - - - - 0.768 - - claudin 15, transcript variant X4
40. MICALL2 ENSGALG00000004070 23 0.768 - - - - - - - 0.768 - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
41. VIT ENSGALG00000010583 16 0.768 - - - - - - - 0.768 - - vitrin [Source:NCBI gene;Acc:421471]
42. ENSGALG00000022661 ENSGALG00000022661 9 0.768 - - - - - - - 0.768 - -
43. MECR ENSGALG00000032763 110 0.768 - - - - - - - 0.768 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
44. BLB1 ENSGALG00000000141 13 0.768 - - - - - - - 0.768 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
45. CYBA ENSGALG00000029367 125 0.768 - - - - - - - 0.768 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
46. PICALM ENSGALG00000039037 57 0.768 - - - - - - - 0.768 - - phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:HGNC:15514]
47. HLCS ENSGALG00000016047 30 0.768 - - - - - - - 0.768 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
48. AMER3 ENSGALG00000041501 5 0.768 - - - - - - - 0.768 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
49. CYP7B1 ENSGALG00000029435 3 0.768 - - - - - - - 0.768 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
50. gga-mir-6569 ENSGALG00000026551 10 0.768 - - - - - - - 0.768 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
51. GTF2A1L ENSGALG00000026747 13 0.768 - - - - - - - 0.768 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
52. CERKL ENSGALG00000008910 70 0.768 - - - - - - - 0.768 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
53. RBM43 ENSGALG00000012479 5 0.768 - - - - - - - 0.768 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
54. ROS1 ENSGALG00000014913 7 0.768 - - - - - - - 0.768 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
55. CCDC181 ENSGALG00000015221 10 0.768 - - - - - - - 0.768 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
56. ENSGALG00000017391 ENSGALG00000017391 12 0.768 - - - - - - - 0.768 - -
57. ENSGALG00000004157 ENSGALG00000004157 1 0.768 - - - - - - - 0.768 - -
58. UNCX ENSGALG00000039292 165 0.768 - - - - - - - 0.768 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
59. B3GNTL1 ENSGALG00000001433 22 0.768 - - - - - - - 0.768 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
60. MOCS1 ENSGALG00000010051 70 0.768 - - - - - - - 0.768 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
61. ADPRHL1 ENSGALG00000016826 133 0.768 - - - - - - - 0.768 - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
62. EIF4H ENSGALG00000001313 59 0.768 - - - - - - - 0.768 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
63. CREB3 ENSGALG00000002523 23 0.768 - - - - - - - 0.768 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
64. MPV17L2 ENSGALG00000041429 168 0.768 - - - - - - - 0.768 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
65. ENSGALG00000025781 ENSGALG00000025781 1 0.768 - - - - - - - 0.768 - -
66. USP19 ENSGALG00000006824 44 0.768 - - - - - - - 0.768 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
67. TGFBR2 ENSGALG00000011442 3 0.768 - - - - - - - 0.768 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
68. ENSGALG00000016393 ENSGALG00000016393 3 0.768 - - - - - - - 0.768 - -
69. ENSGALG00000005482 ENSGALG00000005482 1 0.768 - - - - - - - 0.768 - -
70. COL4A3 ENSGALG00000038612 41 0.768 - - - - - - - 0.768 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
71. WDR78 ENSGALG00000045792 6 0.768 - - - - - - - 0.768 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
72. HPGD ENSGALG00000010769 5 0.768 - - - - - - - 0.768 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
73. PPIL6 ENSGALG00000015237 11 0.768 - - - - - - - 0.768 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
74. TOX3 ENSGALG00000034649 54 0.768 - - - - - - - 0.768 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
75. KIAA0319L ENSGALG00000002445 75 0.768 - - - - - - - 0.768 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
76. RASSF6 ENSGALG00000011664 7 0.768 - - - - - - - 0.768 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
77. C12orf55 C12orf55 0 0.768 - - - - - - - 0.768 - -
78. BMPR1A ENSGALG00000002003 20 0.768 - - - - - - - 0.768 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
79. ENSGALG00000012391 ENSGALG00000012391 0 0.768 - - - - - - - 0.768 - -
80. TCF20 ENSGALG00000011878 69 0.768 - - - - - - - 0.768 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
81. ENSGALG00000019602 ENSGALG00000019602 2 0.768 - - - - - - - 0.768 - -
82. TERF2IP ENSGALG00000000903 41 0.768 - - - - - - - 0.768 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
83. NPBWR1 ENSGALG00000015261 6 0.768 - - - - - - - 0.768 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
84. MEIOB ENSGALG00000005411 6 0.768 - - - - - - - 0.768 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
85. PBEF1 PBEF1 25 0.768 - - - - - - - 0.768 - -
86. gga-mir-6659 ENSGALG00000028216 6 0.768 - - - - - - - 0.768 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
87. CYR61 ENSGALG00000008661 43 0.768 - - - - - - - 0.768 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
88. PYROXD2 ENSGALG00000007014 14 0.768 - - - - - - - 0.768 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
89. FLT4 ENSGALG00000005802 5 0.768 - - - - - - - 0.768 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
90. IL18R1 ENSGALG00000040621 12 0.768 - - - - - - - 0.768 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
91. MYLK2 ENSGALG00000006273 5 0.768 - - - - - - - 0.768 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
92. GRM3 ENSGALG00000006576 474 0.768 - - - - - - - 0.768 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
93. UNC13B ENSGALG00000002165 3 0.768 - - - - - - - 0.768 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
94. NIM1 NIM1 18 0.768 - - - - - - - 0.768 - -
95. COL15A1 ENSGALG00000034119 9 0.768 - - - - - - - 0.768 - - collagen type XV alpha 1 chain, transcript variant X6
96. SLC39A12 ENSGALG00000008602 6 0.768 - - - - - - - 0.768 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
97. FADS6 ENSGALG00000029445 12 0.768 - - - - - - - 0.768 - - fatty acid desaturase 6 [Source:HGNC Symbol;Acc:HGNC:30459]
98. SOX8 ENSGALG00000005263 218 0.768 - - - - - - - 0.768 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
99. FOXG1 ENSGALG00000036364 29 0.768 - - - - - - - 0.768 - - forkhead box G1 [Source:NCBI gene;Acc:396110]
100. PTPRO ENSGALG00000013085 26 0.768 - - - - - - - 0.768 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA