Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
4. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
5. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
6. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
7. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
12. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
13. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
14. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
15. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
16. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
17. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
18. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
19. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
20. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
21. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
22. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. ADCY1 ENSGALG00000031170 4 0.768 - - - - - - - 0.768 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
27. STAR ENSGALG00000003242 4 0.768 - - - - - - - 0.768 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
28. WDR90_1 ENSGALG00000028172 2 0.768 - - - - - - - 0.768 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
29. SPINK6 ENSGALG00000032567 3 0.768 - - - - - - - 0.768 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
30. MOCS1 ENSGALG00000010051 70 0.768 - - - - - - - 0.768 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
31. TMSB10 TMSB10 518 0.768 - - - - - - - 0.768 - -
32. APOD ENSGALG00000006995 2 0.768 - - - - - - - 0.768 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
33. PHACTR3 250 0.768 - - - - - - - 0.768 - - phosphatase and actin regulator 3, transcript variant X4
34. ABCG1 ENSGALG00000016164 10 0.768 - - - - - - - 0.768 - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
35. SLC6A20 ENSGALG00000039333 1 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
36. SOX8 ENSGALG00000005263 218 0.768 - - - - - - - 0.768 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
37. FRMD4A ENSGALG00000034992 6 0.768 - - - - - - - 0.768 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
38. CERKL ENSGALG00000008910 70 0.768 - - - - - - - 0.768 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
39. FADS6 ENSGALG00000029445 12 0.768 - - - - - - - 0.768 - - fatty acid desaturase 6 [Source:HGNC Symbol;Acc:HGNC:30459]
40. GRM3 ENSGALG00000006576 474 0.768 - - - - - - - 0.768 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
41. LOC395381 ENSGALG00000006717 10 0.768 - - - - - - - 0.768 - - ovomucin, alpha subunit, transcript variant X4
42. ENSGALG00000010218 ENSGALG00000010218 12 0.768 - - - - - - - 0.768 - -
43. TNMD ENSGALG00000006821 19 0.768 - - - - - - - 0.768 - - tenomodulin [Source:NCBI gene;Acc:404530]
44. MUT ENSGALG00000016697 43 0.768 - - - - - - - 0.768 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
45. HLCS ENSGALG00000016047 30 0.768 - - - - - - - 0.768 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
46. SLC25A42 ENSGALG00000002621 6 0.768 - - - - - - - 0.768 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
47. FLT4 ENSGALG00000005802 5 0.768 - - - - - - - 0.768 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
48. CYR61 ENSGALG00000008661 43 0.768 - - - - - - - 0.768 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
49. SPOCK3 ENSGALG00000009568 33 0.768 - - - - - - - 0.768 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
50. MYO1D ENSGALG00000000674 14 0.768 - - - - - - - 0.768 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
51. GABRG2 ENSGALG00000038042 211 0.768 - - - - - - - 0.768 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
52. OSBPL3 ENSGALG00000011007 23 0.768 - - - - - - - 0.768 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
53. PHC2 62 0.768 - - - - - - - 0.768 - - polyhomeotic homolog 2
54. WDR78 ENSGALG00000045792 6 0.768 - - - - - - - 0.768 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
55. SLC6A11 ENSGALG00000004879 16 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
56. TSGA10 ENSGALG00000016757 4 0.768 - - - - - - - 0.768 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
57. ENSGALG00000008047 ENSGALG00000008047 13 0.768 - - - - - - - 0.768 - -
58. GTF2A1L ENSGALG00000026747 13 0.768 - - - - - - - 0.768 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
59. KCNK16 ENSGALG00000020049 0 0.768 - - - - - - - 0.768 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
60. CRYBA2 ENSGALG00000011354 14 0.768 - - - - - - - 0.768 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
61. CLVS1 ENSGALG00000043172 56 0.768 - - - - - - - 0.768 - - clavesin 1
62. FOXI1 ENSGALG00000002105 0 0.768 - - - - - - - 0.768 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
63. FAM124A ENSGALG00000017016 0 0.768 - - - - - - - 0.768 - - family with sequence similarity 124 member A [Source:HGNC Symbol;Acc:HGNC:26413]
64. TGFBR2 ENSGALG00000011442 3 0.768 - - - - - - - 0.768 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
65. ENSGALG00000019602 ENSGALG00000019602 2 0.768 - - - - - - - 0.768 - -
66. CUBN ENSGALG00000008704 21 0.768 - - - - - - - 0.768 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
67. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 0.768 - - - - - - - 0.768 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
68. C12orf55 C12orf55 0 0.768 - - - - - - - 0.768 - -
69. TCF20 ENSGALG00000011878 69 0.768 - - - - - - - 0.768 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
70. LRCH1 ENSGALG00000016990 17 0.768 - - - - - - - 0.768 - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
71. CLDN15 ENSGALG00000038964 21 0.768 - - - - - - - 0.768 - - claudin 15, transcript variant X4
72. ENSGALG00000001138 ENSGALG00000001138 21 0.768 - - - - - - - 0.768 - -
73. AMER3 ENSGALG00000041501 5 0.768 - - - - - - - 0.768 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
74. ENSGALG00000028964 ENSGALG00000028964 46 0.768 - - - - - - - 0.768 - -
75. ENSGALG00000029127 ENSGALG00000029127 2 0.768 - - - - - - - 0.768 - -
76. ENSGALG00000028340 ENSGALG00000028340 31 0.768 - - - - - - - 0.768 - -
77. ENSGALG00000010288 ENSGALG00000010288 3 0.768 - - - - - - - 0.768 - -
78. DTX4 ENSGALG00000010835 25 0.768 - - - - - - - 0.768 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
79. PPIL6 ENSGALG00000015237 11 0.768 - - - - - - - 0.768 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
80. DMGDH ENSGALG00000004491 15 0.768 - - - - - - - 0.768 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
81. RBM15 ENSGALG00000000401 22 0.768 - - - - - - - 0.768 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
82. COG3 ENSGALG00000016980 15 0.768 - - - - - - - 0.768 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
83. AOC1 13 0.768 - - - - - - - 0.768 - - amine oxidase, copper containing 1, transcript variant X2
84. HPGD ENSGALG00000010769 5 0.768 - - - - - - - 0.768 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
85. MYLK2 ENSGALG00000006273 5 0.768 - - - - - - - 0.768 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
86. ADAMTS8 ENSGALG00000001370 0 0.768 - - - - - - - 0.768 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
87. CCNT2 ENSGALG00000012207 14 0.768 - - - - - - - 0.768 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
88. JADE1 ENSGALG00000010214 51 0.768 - - - - - - - 0.768 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
89. TRAF6 ENSGALG00000007932 12 0.768 - - - - - - - 0.768 - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
90. NIM1 NIM1 18 0.768 - - - - - - - 0.768 - -
91. ADCK3 ADCK3 110 0.768 - - - - - - - 0.768 - -
92. RMST RMST 2 0.768 - - - - - - - 0.768 - -
93. IL18R1 ENSGALG00000040621 12 0.768 - - - - - - - 0.768 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
94. HECA ENSGALG00000013824 14 0.768 - - - - - - - 0.768 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
95. ING1 ENSGALG00000016849 89 0.768 - - - - - - - 0.768 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
96. SCN4B ENSGALG00000007409 22 0.768 - - - - - - - 0.768 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
97. TERF2IP ENSGALG00000000903 41 0.768 - - - - - - - 0.768 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
98. ZFYVE28 15 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 28, transcript variant X3
99. NLGN4 NLGN4 283 0.768 - - - - - - - 0.768 - -
100. ROS1 ENSGALG00000014913 7 0.768 - - - - - - - 0.768 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA