Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
4. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
5. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
6. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
7. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
12. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
13. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
14. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
15. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
16. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
17. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
18. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
19. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
20. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
21. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
22. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. CD99L2 ENSGALG00000009075 5 0.768 - - - - - - - 0.768 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
27. LRP3 ENSGALG00000004853 13 0.768 - - - - - - - 0.768 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
28. ENSGALG00000005482 ENSGALG00000005482 1 0.768 - - - - - - - 0.768 - -
29. SPIDR SPIDR 19 0.768 - - - - - - - 0.768 - -
30. LOC395381 ENSGALG00000006717 10 0.768 - - - - - - - 0.768 - - ovomucin, alpha subunit, transcript variant X4
31. TRAF1 ENSGALG00000001583 3 0.768 - - - - - - - 0.768 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
32. CBX2 ENSGALG00000023338 10 0.768 - - - - - - - 0.768 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
33. TOX3 ENSGALG00000034649 54 0.768 - - - - - - - 0.768 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
34. SPINK6 ENSGALG00000032567 3 0.768 - - - - - - - 0.768 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
35. MOCS1 ENSGALG00000010051 70 0.768 - - - - - - - 0.768 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
36. SKI ENSGALG00000001229 50 0.768 - - - - - - - 0.768 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
37. COG3 ENSGALG00000016980 15 0.768 - - - - - - - 0.768 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
38. NLGN4 NLGN4 283 0.768 - - - - - - - 0.768 - -
39. gga-mir-218-1 ENSGALG00000018327 3 0.768 - - - - - - - 0.768 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
40. NPBWR1 ENSGALG00000015261 6 0.768 - - - - - - - 0.768 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
41. CYP7B1 ENSGALG00000029435 3 0.768 - - - - - - - 0.768 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
42. ENSGALG00000019602 ENSGALG00000019602 2 0.768 - - - - - - - 0.768 - -
43. TSGA10 ENSGALG00000016757 4 0.768 - - - - - - - 0.768 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
44. PHC2 62 0.768 - - - - - - - 0.768 - - polyhomeotic homolog 2
45. APOD ENSGALG00000006995 2 0.768 - - - - - - - 0.768 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
46. SPOCK3 ENSGALG00000009568 33 0.768 - - - - - - - 0.768 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
47. WDR90 ENSGALG00000028172 13 0.768 - - - - - - - 0.768 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
48. SNORA26 SNORA26 3 0.768 - - - - - - - 0.768 - -
49. RBMS3 ENSGALG00000011439 25 0.768 - - - - - - - 0.768 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
50. FOXI1 ENSGALG00000002105 0 0.768 - - - - - - - 0.768 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
51. TMEM204 ENSGALG00000029047 8 0.768 - - - - - - - 0.768 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
52. LAMC1 ENSGALG00000004620 11 0.768 - - - - - - - 0.768 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
53. CTRB2 ENSGALG00000000038 6 0.768 - - - - - - - 0.768 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
54. RAD54L ENSGALG00000010356 7 0.768 - - - - - - - 0.768 - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
55. RASSF6 ENSGALG00000011664 7 0.768 - - - - - - - 0.768 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
56. TCF20 ENSGALG00000011878 69 0.768 - - - - - - - 0.768 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
57. MGAT3 ENSGALG00000036743 5 0.768 - - - - - - - 0.768 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
58. ENSGALG00000026925 ENSGALG00000026925 119 0.768 - - - - - - - 0.768 - -
59. PDCD4 ENSGALG00000008700 574 0.768 - - - - - - - 0.768 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
60. PPP1R36 ENSGALG00000040026 24 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
61. OCM2 ENSGALG00000003465 74 0.768 - - - - - - - 0.768 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
62. HLCS ENSGALG00000016047 30 0.768 - - - - - - - 0.768 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
63. KLHL40 ENSGALG00000005292 61 0.768 - - - - - - - 0.768 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
64. ENSGALG00000022967 ENSGALG00000022967 240 0.768 - - - - - - - 0.768 - -
65. NME8 ENSGALG00000029677 2 0.768 - - - - - - - 0.768 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
66. LICOS LICOS 13 0.768 - - - - - - - 0.768 - -
67. STAR ENSGALG00000003242 4 0.768 - - - - - - - 0.768 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
68. ENSGALG00000016393 ENSGALG00000016393 3 0.768 - - - - - - - 0.768 - -
69. C1H7ORF60 C1H7ORF60 3 0.768 - - - - - - - 0.768 - -
70. SLC38A10 ENSGALG00000006880 34 0.768 - - - - - - - 0.768 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
71. ENSGALG00000007388 ENSGALG00000007388 41 0.768 - - - - - - - 0.768 - -
72. BCORL1 ENSGALG00000003976 9 0.768 - - - - - - - 0.768 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
73. SLC39A12 ENSGALG00000008602 6 0.768 - - - - - - - 0.768 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
74. TMEM72 ENSGALG00000026808 5 0.768 - - - - - - - 0.768 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
75. IL8 ENSGALG00000026098 16 0.768 - - - - - - - 0.768 - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
76. KIAA1755 3 0.768 - - - - - - - 0.768 - - KIAA1755 ortholog, transcript variant X2
77. DSCAM ENSGALG00000016138 16 0.768 - - - - - - - 0.768 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
78. PAPPA ENSGALG00000007079 6 0.768 - - - - - - - 0.768 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
79. LOC100857820 ENSGALG00000001824 16 0.768 - - - - - - - 0.768 - - uncharacterized LOC100857820
80. CYBA ENSGALG00000029367 125 0.768 - - - - - - - 0.768 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
81. TNFRSF13B ENSGALG00000024122 0 0.768 - - - - - - - 0.768 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
82. ENSGALG00000001138 ENSGALG00000001138 21 0.768 - - - - - - - 0.768 - -
83. MEIOB ENSGALG00000005411 6 0.768 - - - - - - - 0.768 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
84. SNORA44 SNORA44 29 0.768 - - - - - - - 0.768 - -
85. RBM43 ENSGALG00000012479 5 0.768 - - - - - - - 0.768 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
86. TMSB10 TMSB10 518 0.768 - - - - - - - 0.768 - -
87. SH3GL3 ENSGALG00000006045 12 0.768 - - - - - - - 0.768 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
88. SOX8 ENSGALG00000005263 218 0.768 - - - - - - - 0.768 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
89. JADE1 ENSGALG00000010214 51 0.768 - - - - - - - 0.768 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
90. ENSGALG00000026654 ENSGALG00000026654 10 0.768 - - - - - - - 0.768 - -
91. COL4A3 ENSGALG00000038612 41 0.768 - - - - - - - 0.768 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
92. E2F3 ENSGALG00000012680 21 0.768 - - - - - - - 0.768 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
93. STMN2 ENSGALG00000039690 989 0.768 - - - - - - - 0.768 - - stathmin 2 [Source:NCBI gene;Acc:396095]
94. ENSGALG00000028964 ENSGALG00000028964 46 0.768 - - - - - - - 0.768 - -
95. RMST RMST 2 0.768 - - - - - - - 0.768 - -
96. WDR78 ENSGALG00000045792 6 0.768 - - - - - - - 0.768 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
97. B3GALT6 ENSGALG00000001859 5 0.768 - - - - - - - 0.768 - - beta-1,3-galactosyltransferase 6
98. ENSGALG00000018621 ENSGALG00000018621 8 0.768 - - - - - - - 0.768 - -
99. PPIL6 ENSGALG00000015237 11 0.768 - - - - - - - 0.768 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
100. SLC15A1 ENSGALG00000016884 10 0.768 - - - - - - - 0.768 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA