Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
4. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
5. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
6. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
7. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
12. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
13. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
14. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
15. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
16. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
17. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
18. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
19. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
20. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
21. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
22. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. ADAMTS8 ENSGALG00000001370 0 0.768 - - - - - - - 0.768 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
27. SCG5 ENSGALG00000009725 10 0.768 - - - - - - - 0.768 - - secretogranin V [Source:NCBI gene;Acc:769742]
28. GLRA2 ENSGALG00000016571 10 0.768 - - - - - - - 0.768 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
29. RGS13 ENSGALG00000026810 8 0.768 - - - - - - - 0.768 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
30. ING1 ENSGALG00000016849 89 0.768 - - - - - - - 0.768 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
31. ENSGALG00000026654 ENSGALG00000026654 10 0.768 - - - - - - - 0.768 - -
32. COTL1 ENSGALG00000017644 81 0.768 - - - - - - - 0.768 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
33. COG3 ENSGALG00000016980 15 0.768 - - - - - - - 0.768 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
34. SLC6A11 ENSGALG00000004879 16 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
35. ENSGALG00000014605 ENSGALG00000014605 1 0.768 - - - - - - - 0.768 - -
36. ADCY7 ENSGALG00000003837 10 0.768 - - - - - - - 0.768 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
37. EXOC6B ENSGALG00000016098 3 0.768 - - - - - - - 0.768 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
38. CFTII CFTII 6 0.768 - - - - - - - 0.768 - -
39. TMSB10 TMSB10 518 0.768 - - - - - - - 0.768 - -
40. CKMT1A ENSGALG00000008352 44 0.768 - - - - - - - 0.768 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
41. RBL2 ENSGALG00000003663 10 0.768 - - - - - - - 0.768 - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
42. LICOS LICOS 13 0.768 - - - - - - - 0.768 - -
43. GABRG2 ENSGALG00000038042 211 0.768 - - - - - - - 0.768 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
44. ENSGALG00000028737 ENSGALG00000028737 24 0.768 - - - - - - - 0.768 - -
45. DNAH14 ENSGALG00000045078 1 0.768 - - - - - - - 0.768 - - dynein, axonemal, heavy chain 14
46. CCNT2 ENSGALG00000012207 14 0.768 - - - - - - - 0.768 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
47. LAMC1 ENSGALG00000004620 11 0.768 - - - - - - - 0.768 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
48. OTX2 ENSGALG00000034889 8 0.768 - - - - - - - 0.768 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
49. KCNK16 ENSGALG00000020049 0 0.768 - - - - - - - 0.768 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
50. PPP1R36 ENSGALG00000040026 24 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
51. LOC395991 ENSGALG00000006944 103 0.768 - - - - - - - 0.768 - - crescent, transcript variant X1
52. CPS1 ENSGALG00000002944 2 0.768 - - - - - - - 0.768 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
53. SEC16B ENSGALG00000004424 4 0.768 - - - - - - - 0.768 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
54. SLC20A1 ENSGALG00000013740 40 0.768 - - - - - - - 0.768 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
55. KNDC1 ENSGALG00000007007 31 0.768 - - - - - - - 0.768 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
56. SH3GL3 ENSGALG00000006045 12 0.768 - - - - - - - 0.768 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
57. LRP6 ENSGALG00000031503 39 0.768 - - - - - - - 0.768 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
58. JADE1 ENSGALG00000010214 51 0.768 - - - - - - - 0.768 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
59. SUSD5 ENSGALG00000042289 1 0.768 - - - - - - - 0.768 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
60. ATXN10 ENSGALG00000014234 16 0.768 - - - - - - - 0.768 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
61. WDR90 ENSGALG00000028172 13 0.768 - - - - - - - 0.768 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
62. PEX5 ENSGALG00000014683 17 0.768 - - - - - - - 0.768 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
63. CLVS1 ENSGALG00000043172 56 0.768 - - - - - - - 0.768 - - clavesin 1
64. TMEM204 ENSGALG00000029047 8 0.768 - - - - - - - 0.768 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
65. ADCK3 ADCK3 110 0.768 - - - - - - - 0.768 - -
66. HECA ENSGALG00000013824 14 0.768 - - - - - - - 0.768 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
67. BAFF BAFF 40 0.768 - - - - - - - 0.768 - -
68. ENSGALG00000007388 ENSGALG00000007388 41 0.768 - - - - - - - 0.768 - -
69. TNFRSF13B ENSGALG00000024122 0 0.768 - - - - - - - 0.768 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
70. TIMP4 ENSGALG00000004969 21 0.768 - - - - - - - 0.768 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
71. MMP27 ENSGALG00000019060 19 0.768 - - - - - - - 0.768 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]
72. RBKS ENSGALG00000010043 3 0.768 - - - - - - - 0.768 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
73. CTRB2 ENSGALG00000000038 6 0.768 - - - - - - - 0.768 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
74. ACKR2 ENSGALG00000005305 0 0.768 - - - - - - - 0.768 - - atypical chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1565]
75. RMST RMST 2 0.768 - - - - - - - 0.768 - -
76. CUBN ENSGALG00000008704 21 0.768 - - - - - - - 0.768 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
77. SMTN 18 0.768 - - - - - - - 0.768 - - smoothelin, transcript variant X2
78. SNORA44 SNORA44 29 0.768 - - - - - - - 0.768 - -
79. LOC421081 ENSGALG00000015106 0 0.768 - - - - - - - 0.768 - - uncharacterized LOC421081, transcript variant X1
80. MMP11 ENSGALG00000005968 3 0.768 - - - - - - - 0.768 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
81. SPIDR SPIDR 19 0.768 - - - - - - - 0.768 - -
82. SPG20 22 0.768 - - - - - - - 0.768 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
83. ADCY1 ENSGALG00000031170 4 0.768 - - - - - - - 0.768 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
84. FHDC1 ENSGALG00000041054 34 0.768 - - - - - - - 0.768 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
85. ENSGALG00000028298 ENSGALG00000028298 34 0.768 - - - - - - - 0.768 - -
86. RBM15 ENSGALG00000000401 22 0.768 - - - - - - - 0.768 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
87. RAI1 ENSGALG00000004888 14 0.768 - - - - - - - 0.768 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
88. NMNAT3 ENSGALG00000026187 11 0.768 - - - - - - - 0.768 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
89. CBLN1 ENSGALG00000042664 15 0.768 - - - - - - - 0.768 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
90. MUT ENSGALG00000016697 43 0.768 - - - - - - - 0.768 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
91. UPK3B 4 0.768 - - - - - - - 0.768 - - uroplakin 3B
92. DENND5A ENSGALG00000005840 54 0.768 - - - - - - - 0.768 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
93. SLC6A20 ENSGALG00000039333 1 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
94. PPP1R1B ENSGALG00000044406 6 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
95. FRMD4A ENSGALG00000034992 6 0.768 - - - - - - - 0.768 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
96. OCM2 ENSGALG00000003465 74 0.768 - - - - - - - 0.768 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
97. ENSGALG00000022967 ENSGALG00000022967 240 0.768 - - - - - - - 0.768 - -
98. CRYBA2 ENSGALG00000011354 14 0.768 - - - - - - - 0.768 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
99. APOD ENSGALG00000006995 2 0.768 - - - - - - - 0.768 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
100. TMEM72 ENSGALG00000026808 5 0.768 - - - - - - - 0.768 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA