Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIN3A

Gene Name Gene ID Reads Annotation
SIN3A ENSGALG00000001644 1141 SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]











Genes with expression patterns similar to SIN3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIN3A ENSGALG00000001644 1141 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
2. GNA12 ENSGALG00000004368 692 1 - - - - - - - 1.000 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
3. STAMBP ENSGALG00000042555 1362 1 - - - - - - - 1.000 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
4. C9orf89 C9orf89 3056 1 - - - - - - - 1.000 - -
5. TMEM69 ENSGALG00000010279 716 1 - - - - - - - 1.000 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
6. TDRD1 ENSGALG00000046180 612 1 - - - - - - - 1.000 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
7. ENSGALG00000028413 ENSGALG00000028413 551 1 - - - - - - - 1.000 - -
8. CTU2 4818 0.999 - - - - - - - 0.999 - - cytosolic thiouridylase subunit 2, transcript variant X3
9. USP30 ENSGALG00000040265 2000 0.999 - - - - - - - 0.999 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
10. CREB1 ENSGALG00000008494 2219 0.999 - - - - - - - 0.999 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
11. VEGFC ENSGALG00000010847 2197 0.999 - - - - - - - 0.999 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
12. USP42 ENSGALG00000003378 1392 0.999 - - - - - - - 0.999 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
13. RRBP1 ENSGALG00000008676 5376 0.999 - - - - - - - 0.999 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
14. TNFRSF21 ENSGALG00000016719 2762 0.999 - - - - - - - 0.999 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
15. PRRX2 ENSGALG00000028236 1990 0.999 - - - - - - - 0.999 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
16. SLC52A3 ENSGALG00000006194 3952 0.998 - - - - - - - 0.998 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
17. ZNF462 ENSGALG00000015451 12653 0.998 - - - - - - - 0.998 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
18. SLBP ENSGALG00000015712 5586 0.998 - - - - - - - 0.998 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
19. VPS36 ENSGALG00000017026 3658 0.997 - - - - - - - 0.997 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
20. ADAR ENSGALG00000021475 6004 0.997 - - - - - - - 0.997 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
21. CWC22 ENSGALG00000009001 5984 0.997 - - - - - - - 0.997 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
22. GYG1 ENSGALG00000035535 6311 0.997 - - - - - - - 0.997 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
23. INTS2 ENSGALG00000005269 6966 0.996 - - - - - - - 0.996 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
24. FAT1 ENSGALG00000013579 6030 0.996 - - - - - - - 0.996 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
25. PHAX ENSGALG00000014691 8114 0.996 - - - - - - - 0.996 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
26. PPAT ENSGALG00000013728 7563 0.996 - - - - - - - 0.996 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
27. PTK7 ENSGALG00000008609 8081 0.994 - - - - - - - 0.994 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
28. LMO7 ENSGALG00000016920 3809 0.994 - - - - - - - 0.994 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
29. KLHDC2 ENSGALG00000012244 12903 0.993 - - - - - - - 0.993 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
30. PDCD6 ENSGALG00000013400 7611 0.992 - - - - - - - 0.992 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
31. MAP4K3 ENSGALG00000039720 5124 0.982 - - - - - - - 0.982 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
32. NAA30 ENSGALG00000012098 4681 0.98 - - - - - - - 0.980 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
33. WDFY3 10775 0.979 - - - - - - - 0.979 - - WD repeat and FYVE domain containing 3, transcript variant X7
34. LAMTOR2 ENSGALG00000029881 35356 0.978 - - - - - - - 0.978 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
35. NSUN4 ENSGALG00000010360 3567 0.962 - - - - - - - 0.962 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
36. ACTR6 ENSGALG00000040976 31271 0.961 - - - - - - - 0.961 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
37. C11orf57 C11orf57 4971 0.96 - - - - - - - 0.960 - -
38. SPATA20 ENSGALG00000006857 3506 0.96 - - - - - - - 0.960 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
39. CPSF4 ENSGALG00000004714 14353 0.96 - - - - - - - 0.960 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
40. BMP4 ENSGALG00000012429 4306 0.957 - - - - - - - 0.957 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
41. TIMM23B ENSGALG00000002089 8122 0.952 - - - - - - - 0.952 - - translocase of inner mitochondrial membrane 23 homolog B
42. MCM6 ENSGALG00000012348 12523 0.951 - - - - - - - 0.951 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
43. CSNK2A1 ENSGALG00000006197 41409 0.948 - - - - - - - 0.948 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
44. RPL7L1 ENSGALG00000011974 20292 0.942 - - - - - - - 0.942 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
45. MYBL2 ENSGALG00000003503 15875 0.942 - - - - - - - 0.942 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
46. MED6 ENSGALG00000029743 9414 0.941 - - - - - - - 0.941 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
47. FARP1 ENSGALG00000016886 13132 0.938 - - - - - - - 0.938 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
48. PDCL3 ENSGALG00000016772 14897 0.937 - - - - - - - 0.937 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
49. DHCR24 ENSGALG00000010798 3963 0.936 - - - - - - - 0.936 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
50. ZNF367 ENSGALG00000012629 3215 0.936 - - - - - - - 0.936 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
51. HSPA12A ENSGALG00000009248 7783 0.929 - - - - - - - 0.929 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
52. LAPTM4A ENSGALG00000016479 15973 0.927 - - - - - - - 0.927 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
53. MGST1 ENSGALG00000013098 17632 0.925 - - - - - - - 0.925 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
54. THRAP3 ENSGALG00000002144 21958 0.925 - - - - - - - 0.925 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
55. DERL1 ENSGALG00000033950 15074 0.908 - - - - - - - 0.908 - - derlin 1 [Source:NCBI gene;Acc:420350]
56. TAF15 ENSGALG00000002060 12320 0.899 - - - - - - - 0.899 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
57. TMEM199 ENSGALG00000023757 10781 0.891 - - - - - - - 0.891 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
58. FBXO9 ENSGALG00000016320 9600 0.875 - - - - - - - 0.875 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
59. ATP6V0B ENSGALG00000010091 14901 0.872 - - - - - - - 0.872 - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
60. GLO1 ENSGALG00000010127 31662 0.871 - - - - - - - 0.871 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
61. CKAP4 ENSGALG00000012659 36398 0.868 - - - - - - - 0.868 - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
62. EIF1 ENSGALG00000028517 124882 0.862 - - - - - - - 0.862 - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
63. ANP32E ENSGALG00000039891 35925 0.86 - - - - - - - 0.860 - - acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
64. MAD2L1BP ENSGALG00000027871 7835 0.854 - - - - - - - 0.854 - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
65. GTLF3B GTLF3B 5079 0.854 - - - - - - - 0.854 - -
66. ARHGEF7 ENSGALG00000031009 10090 0.845 - - - - - - - 0.845 - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
67. ATP5MC1 ENSGALG00000001330 37766 0.832 - - - - - - - 0.832 - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
68. UPF2 ENSGALG00000033772 9548 0.831 - - - - - - - 0.831 - - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
69. EIF5 ENSGALG00000011464 62584 0.831 - - - - - - - 0.831 - - eukaryotic translation initiation factor 5 [Source:NCBI gene;Acc:423479]
70. RBM17 ENSGALG00000006332 12656 0.83 - - - - - - - 0.830 - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
71. ENSGALG00000021694 ENSGALG00000021694 26011 0.821 - - - - - - - 0.821 - -
72. POLR2E ENSGALG00000002591 26405 0.819 - - - - - - - 0.819 - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
73. TRA2B ENSGALG00000006531 40566 0.806 - - - - - - - 0.806 - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
74. NDUFV2 ENSGALG00000036625 29234 0.792 - - - - - - - 0.792 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
75. SEC24D ENSGALG00000011998 68 0.791 - - - - - - - - - 0.791 SEC24 homolog D, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10706]
76. MTA1 ENSGALG00000002803 11572 0.787 - - - - - - - 0.787 - - metastasis associated 1 [Source:NCBI gene;Acc:429060]
77. SELENBP1 ENSGALG00000000866 1253 0.781 - - - - - - - - - 0.781 selenium binding protein 1 [Source:NCBI gene;Acc:425664]
78. NUSAP1 ENSGALG00000008584 9955 0.776 - - - - - - - 0.776 - - nucleolar and spindle associated protein 1 [Source:NCBI gene;Acc:423213]
79. ENSGALG00000028350 ENSGALG00000028350 317 0.772 - - - - - - - - - 0.772
80. AAGAB ENSGALG00000007887 142 0.763 - - 0.763 - - - - - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
81. SPRED1 ENSGALG00000028203 6520 0.755 - - - - - - - 0.755 - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
82. MMD ENSGALG00000003078 21311 0.753 - - - - - - - 0.753 - - monocyte to macrophage differentiation associated [Source:NCBI gene;Acc:417397]
83. UQCRC1 ENSGALG00000005789 23201 0.746 - - - - - - - 0.746 - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
84. ENSGALG00000007050 ENSGALG00000007050 28 0.741 - - - - - - - - - 0.741
85. TKT ENSGALG00000005309 19801 0.734 - - - - - - - 0.734 - - transketolase [Source:HGNC Symbol;Acc:HGNC:11834]
86. PACRGL ENSGALG00000014406 18 0.73 - - - - - - - - - 0.730 parkin coregulated like [Source:HGNC Symbol;Acc:HGNC:28442]
87. MAB21L2 4841 0.726 - - - - - - - 0.726 - - mab-21-like 2 (C. elegans)
88. COQ4 ENSGALG00000004927 245 0.726 - - - - - - - - - 0.726 coenzyme Q4 [Source:HGNC Symbol;Acc:HGNC:19693]
89. PIH1D2 388 0.725 - - - - - - - - - 0.725 PIH1 domain containing 2, transcript variant X2
90. CNOT7 ENSGALG00000013649 23435 0.722 - - - - - - - 0.722 - - CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:422733]
91. LRIG1 ENSGALG00000007483 19 0.717 - - - - - - - - - 0.717 leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
92. ENSGALG00000013327 ENSGALG00000013327 16 0.712 - - 0.712 - - - - - - -
93. PODXL ENSGALG00000006409 30676 0.711 - - - - - - - 0.711 - - podocalyxin like [Source:NCBI gene;Acc:395755]
94. TMEM27 ENSGALG00000029168 36 0.71 - - 0.710 - - - - - - - transmembrane protein 27, transcript variant X3
95. EPHA4 ENSGALG00000005256 86 0.706 - - - - - - - - - 0.706 EPH receptor A4 [Source:NCBI gene;Acc:395559]
96. SUMO3 ENSGALG00000032783 47823 0.704 - - - - - - - 0.704 - - small ubiquitin-like modifier 3 [Source:NCBI gene;Acc:770553]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA