Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIL1

Gene Name Gene ID Reads Annotation
SIL1 ENSGALG00000002457 147 SIL1 nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:24624]











Genes with expression patterns similar to SIL1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIL1 ENSGALG00000002457 147 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SIL1 nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:24624]
2. SCN5A ENSGALG00000006112 137 2.386 - - 0.819 - 0.809 - 0.758 - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
3. PARP3 ENSGALG00000004517 331 1.607 - - - - - - 0.827 - - 0.780 poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
4. SNED1 ENSGALG00000043596 693 1.493 - - 0.768 - - - - - - 0.725 sushi, nidogen and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:24696]
5. FXR FXR 52 0.946 - - - - - - 0.946 - - -
6. ATXN7L1 ENSGALG00000008115 84 0.923 - - - - 0.923 - - - - - ataxin 7 like 1 [Source:HGNC Symbol;Acc:HGNC:22210]
7. NMU ENSGALG00000020151 29 0.922 - - - - 0.922 - - - - - neuromedin U [Source:NCBI gene;Acc:422748]
8. AK4 ENSGALG00000011035 9 0.921 - - - - 0.921 - - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
9. KCTD14 ENSGALG00000017266 31 0.921 - - - - 0.921 - - - - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
10. TMED6 ENSGALG00000000654 8 0.921 - - - - 0.921 - - - - - transmembrane p24 trafficking protein 6 [Source:NCBI gene;Acc:101750075]
11. MYH7B ENSGALG00000030985 199 0.918 - - - - 0.918 - - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
12. DCBLD1 ENSGALG00000014907 19 0.917 - - - - 0.917 - - - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
13. FAM65C 36 0.911 - - - - 0.911 - - - - - family with sequence similarity 65 member C, transcript variant X29
14. LPP ENSGALG00000007337 18 0.91 - - - - - - - 0.910 - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
15. ENSGALG00000003817 ENSGALG00000003817 45 0.906 - - - - - - - 0.906 - -
16. LIMS2 ENSGALG00000001995 41 0.906 - - - - 0.906 - - - - - LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]
17. LRRC55 ENSGALG00000029130 21 0.903 - - - - - - - 0.903 - - leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
18. STON2 ENSGALG00000010579 76 0.903 - - - - - - - 0.903 - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
19. FAM184B ENSGALG00000041854 43 0.903 - - - - - - - 0.903 - - family with sequence similarity 184 member B [Source:HGNC Symbol;Acc:HGNC:29235]
20. CDH7 ENSGALG00000013782 11 0.903 - - - - - - - 0.903 - - cadherin 7 [Source:NCBI gene;Acc:374007]
21. SRGN ENSGALG00000004167 77 0.903 - - - - - - - 0.903 - - serglycin [Source:HGNC Symbol;Acc:HGNC:9361]
22. TRPV1 ENSGALG00000004649 17 0.903 - - - - - - - 0.903 - - transient receptor potential cation channel subfamily V member 1 [Source:NCBI gene;Acc:395259]
23. METTL15 ENSGALG00000012153 233 0.9 - - - - 0.900 - - - - - methyltransferase like 15 [Source:NCBI gene;Acc:421606]
24. FAM180A ENSGALG00000028459 14 0.897 - - - - - - - 0.897 - - family with sequence similarity 180 member A [Source:HGNC Symbol;Acc:HGNC:33773]
25. PTPN22 ENSGALG00000021656 1 0.897 - - - - - - - 0.897 - - protein tyrosine phosphatase, non-receptor type 22 [Source:HGNC Symbol;Acc:HGNC:9652]
26. ENSGALG00000008449 ENSGALG00000008449 865 0.897 - - - - - - - 0.897 - -
27. ENSGALG00000027180 ENSGALG00000027180 1 0.897 - - - - - - - 0.897 - -
28. SOCS1 ENSGALG00000007158 14 0.897 - - - - - - - 0.897 - - suppressor of cytokine signaling 1 [Source:NCBI gene;Acc:416630]
29. SNORA50 SNORA50 9 0.897 - - - - - - - 0.897 - -
30. KLHL23 ENSGALG00000020737 13 0.897 - - - - - - - 0.897 - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
31. ENSGALG00000001552 ENSGALG00000001552 4 0.897 - - - - - - - 0.897 - -
32. PDZD3 ENSGALG00000006779 24 0.897 - - - - - - - 0.897 - - PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:19891]
33. PEAK1 ENSGALG00000002759 39 0.897 - - - - - - - 0.897 - - pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
34. KCNK10 ENSGALG00000010598 7 0.897 - - - - - - - 0.897 - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
35. AFF1 ENSGALG00000043935 34 0.897 - - - - - - - 0.897 - - AF4/FMR2 family member 1 [Source:HGNC Symbol;Acc:HGNC:7135]
36. ENSGALG00000006003 ENSGALG00000006003 11 0.897 - - - - - - - 0.897 - -
37. KLHL33 ENSGALG00000027742 18 0.897 - - - - - - - 0.897 - - kelch like family member 33, transcript variant X2
38. UBE2J1 ENSGALG00000015775 13 0.897 - - - - - - - 0.897 - - ubiquitin conjugating enzyme E2 J1 [Source:NCBI gene;Acc:395528]
39. CCBL1 22 0.897 - - - - - - - 0.897 - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
40. C5 ENSGALG00000001565 142 0.896 - - - - 0.896 - - - - - complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
41. YES1 ENSGALG00000014860 31 0.893 - - - - - - 0.893 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
42. PUS7 ENSGALG00000008132 531 0.889 - - - - 0.889 - - - - - pseudouridylate synthase 7 [Source:NCBI gene;Acc:417709]
43. RASGRP1 ENSGALG00000009740 15 0.883 - - - - - - - 0.883 - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
44. UPRT ENSGALG00000007793 321 0.879 - - - - - - - - - 0.879 uracil phosphoribosyltransferase homolog [Source:NCBI gene;Acc:422327]
45. IRF2BP2 ENSGALG00000010996 11 0.873 - - - - - - - 0.873 - - interferon regulatory factor 2 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21729]
46. PFN2 313 0.873 - - - - 0.873 - - - - - profilin 2, transcript variant X2
47. DPY19L3 ENSGALG00000004559 40 0.872 - - - - - - - 0.872 - - dpy-19 like C-mannosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:27120]
48. ADAM23 ENSGALG00000008582 28 0.867 - - - - - - - 0.867 - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
49. FCHO1 FCHO1 149 0.867 - - - - 0.867 - - - - -
50. GLUL ENSGALG00000043754 71 0.866 - - - - - - - 0.866 - - glutamate-ammonia ligase [Source:NCBI gene;Acc:396489]
51. CHTL1A CHTL1A 79 0.864 - - - - - - - 0.864 - -
52. KIAA1919 KIAA1919 58 0.86 - - - - 0.860 - - - - -
53. ACSF3 ENSGALG00000035225 261 0.858 - - 0.858 - - - - - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
54. MAP7D1 ENSGALG00000021634 457 0.858 - - - - - - - 0.858 - - MAP7 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25514]
55. CREB3 ENSGALG00000002523 23 0.857 - - 0.857 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
56. SLC14A2 SLC14A2 4 0.856 - - - - - - - 0.856 - -
57. PDZK1IP1 ENSGALG00000010473 551 0.855 - - 0.855 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
58. gga-mir-6561 ENSGALG00000026650 135 0.854 - - 0.854 - - - - - - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
59. CD300A CD300A 173 0.853 - - 0.853 - - - - - - -
60. ZNF276 ENSGALG00000000513 2410 0.853 - - - - 0.853 - - - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
61. ENSGALG00000026925 ENSGALG00000026925 119 0.849 - - 0.849 - - - - - - -
62. ENSGALG00000006724 ENSGALG00000006724 74 0.848 - - - - - - - 0.848 - -
63. NQO1 ENSGALG00000023437 13 0.848 - - - - - - - 0.848 - - NAD(P)H quinone dehydrogenase 1 [Source:NCBI gene;Acc:769737]
64. MCC ENSGALG00000000208 61 0.848 - - - - - - - 0.848 - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
65. ALKBH8 ENSGALG00000017170 699 0.847 - - 0.847 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
66. ATXN3 ENSGALG00000010766 48 0.847 - - 0.847 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
67. EML5 ENSGALG00000010639 25 0.847 - - 0.847 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
68. P4HA3 ENSGALG00000042030 826 0.847 - - - - - - - 0.847 - - prolyl 4-hydroxylase subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:30135]
69. KIAA0040 ENSGALG00000030543 53 0.846 - - - - 0.846 - - - - - KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
70. AHR2 ENSGALG00000023742 21 0.845 - - 0.845 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
71. C15orf60 C15orf60 16 0.844 - - 0.844 - - - - - - -
72. OTOA ENSGALG00000007070 94 0.844 - - 0.844 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
73. MKNK1 ENSGALG00000010440 196 0.844 - - - - 0.844 - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
74. KPNA5 ENSGALG00000014937 28 0.844 - - 0.844 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
75. AIDA ENSGALG00000009426 219 0.842 - - - - - - - 0.842 - - axin interactor, dorsalization associated [Source:NCBI gene;Acc:421335]
76. DNALI1 ENSGALG00000001996 64 0.842 - - 0.842 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
77. PHTF2 ENSGALG00000008335 722 0.842 - - 0.842 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
78. ENSGALG00000004127 ENSGALG00000004127 566 0.841 - - 0.841 - - - - - - -
79. MEGF10 ENSGALG00000014699 248 0.841 - - - - - - - 0.841 - - multiple EGF like domains 10 [Source:HGNC Symbol;Acc:HGNC:29634]
80. SLC35F3 ENSGALG00000011003 324 0.838 - - - - 0.838 - - - - - solute carrier family 35 member F3 [Source:HGNC Symbol;Acc:HGNC:23616]
81. RREB1 ENSGALG00000012799 125 0.837 - - - - - - - 0.837 - - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
82. ZNF362 ENSGALG00000026558 11 0.835 - - - - - - 0.835 - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
83. DRD2 ENSGALG00000007794 399 0.835 - - - - - - 0.835 - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
84. CHADL ENSGALG00000011970 42 0.835 - - - - - - 0.835 - - - chondroadherin-like [Source:NCBI gene;Acc:417998]
85. ENSGALG00000000865 ENSGALG00000000865 46 0.835 - - - - - - 0.835 - - -
86. NKX2-5 ENSGALG00000002886 81 0.835 - - - - - - 0.835 - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
87. CYP2J19 ENSGALG00000011413 22 0.835 - - - - - - 0.835 - - - cytochrome P450, family 2, subfamily J, polypeptide 19
88. SNX18 ENSGALG00000014914 7 0.835 - - - - - - 0.835 - - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
89. WFIKKN2 ENSGALG00000007367 9 0.835 - - - - - - 0.835 - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30916]
90. HPGDS ENSGALG00000010402 343 0.835 - - - - - - 0.835 - - - hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
91. TTC9 ENSGALG00000017652 16 0.835 - - - - - - 0.835 - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
92. PLXNB1 23 0.835 - - - - - - 0.835 - - - plexin B1, transcript variant X2
93. TOX3 ENSGALG00000034649 54 0.834 - - 0.834 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
94. LARP6 ENSGALG00000004046 97 0.834 - - - - - - - 0.834 - - La ribonucleoprotein domain family member 6 [Source:HGNC Symbol;Acc:HGNC:24012]
95. DFFB ENSGALG00000036295 88 0.833 - - 0.833 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
96. TSPAN9 ENSGALG00000014346 228 0.833 - - - - - - - 0.833 - - tetraspanin 9 [Source:HGNC Symbol;Acc:HGNC:21640]
97. EPHA1 ENSGALG00000014687 174 0.832 - - 0.832 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
98. FSCN2 ENSGALG00000023354 13 0.832 - - 0.832 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
99. MIS12 ENSGALG00000001632 372 0.832 - - 0.832 - - - - - - - MIS12, kinetochore complex component [Source:NCBI gene;Acc:693254]
100. DLX6 ENSGALG00000023195 29 0.831 - - 0.831 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]

There are 261 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA