Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIGMAR1

Gene Name Gene ID Reads Annotation
SIGMAR1 ENSGALG00000028996 12267 sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]











Genes with expression patterns similar to SIGMAR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIGMAR1 ENSGALG00000028996 12267 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
2. WDR36 ENSGALG00000000247 11277 1.763 - - - - - - 0.818 0.945 - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
3. THOC7 ENSGALG00000007299 38227 1.549 - - - - 0.702 - 0.847 - - - THO complex 7 [Source:NCBI gene;Acc:416077]
4. UBR2 ENSGALG00000009906 7717 0.987 - - - - - - - 0.987 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
5. RAB35 ENSGALG00000007308 6300 0.977 - - - - - - - 0.977 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
6. USP54 ENSGALG00000005232 2749 0.976 - - - - - - - 0.976 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
7. KIAA1191 ENSGALG00000003370 2599 0.976 - - - - - - - 0.976 - - KIAA1191 [Source:NCBI gene;Acc:416230]
8. TMEM168 ENSGALG00000009443 2452 0.976 - - - - - - - 0.976 - - transmembrane protein 168, transcript variant X1
9. FBXO28 ENSGALG00000009331 2871 0.975 - - - - - - - 0.975 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
10. OXSR1 ENSGALG00000005979 2905 0.975 - - - - - - - 0.975 - - oxidative stress responsive 1
11. MGAT4B ENSGALG00000005924 2663 0.974 - - - - - - - 0.974 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
12. RPP38 ENSGALG00000008794 1057 0.973 - - - - - - - 0.973 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
13. RAB9A ENSGALG00000016579 3262 0.973 - - - - - - - 0.973 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
14. HSBP1 ENSGALG00000043039 2365 0.973 - - - - - - - 0.973 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
15. TMEM135 2283 0.973 - - - - - - - 0.973 - - transmembrane protein 135, transcript variant X4
16. USP25 ENSGALG00000015693 2567 0.972 - - - - - - - 0.972 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
17. WDFY1 ENSGALG00000005158 2512 0.972 - - - - - - - 0.972 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
18. TMF1 ENSGALG00000013408 3344 0.972 - - - - - - - 0.972 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
19. LPAR1 ENSGALG00000015729 3874 0.972 - - - - - - - 0.972 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
20. JARID2 ENSGALG00000012702 4280 0.972 - - - - - - - 0.972 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
21. CA9 ENSGALG00000021340 1431 0.972 - - - - - - - 0.972 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
22. RGCC ENSGALG00000016954 1282 0.971 - - - - - - - 0.971 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
23. HSD17B2 ENSGALG00000005467 275 0.971 - - - - - - - 0.971 - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
24. KLF5 ENSGALG00000016927 1080 0.971 - - - - - - - 0.971 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
25. ATG13 ENSGALG00000008347 7374 0.971 - - - - - - - 0.971 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
26. NPHP3 ENSGALG00000034586 1465 0.971 - - - - - - - 0.971 - - nephrocystin 3, transcript variant X1
27. APC ENSGALG00000000220 1266 0.971 - - - - - - - 0.971 - - APC, WNT signaling pathway regulator, transcript variant X12
28. EIF2A ENSGALG00000010401 2201 0.971 - - - - - - - 0.971 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
29. NFU1 ENSGALG00000030200 6882 0.971 - - - - - - - 0.971 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
30. ITPR1 ENSGALG00000008294 1226 0.97 - - - - - - - 0.970 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
31. AP1S2 ENSGALG00000016551 421 0.97 - - - - - - - 0.970 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
32. TBC1D32 ENSGALG00000014876 681 0.97 - - - - - - - 0.970 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
33. GCN1L1 GCN1L1 4601 0.97 - - - - - - - 0.970 - -
34. BET1 ENSGALG00000024485 2451 0.97 - - - - - - - 0.970 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
35. HES5 ENSGALG00000001141 6514 0.97 - - - - - - - 0.970 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
36. MAN2A2 ENSGALG00000033790 2717 0.97 - - - - - - - 0.970 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
37. CTTN ENSGALG00000007700 709 0.97 - - - - - - - 0.970 - - cortactin [Source:NCBI gene;Acc:396455]
38. C3H6ORF154 C3H6ORF154 1078 0.97 - - - - - - - 0.970 - -
39. UTP20 ENSGALG00000011643 3012 0.969 - - - - - - - 0.969 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
40. SLC38A11 ENSGALG00000011052 386 0.969 - - - - - - - 0.969 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
41. DFFA ENSGALG00000002820 2046 0.969 - - - - - - - 0.969 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
42. IRF2BPL ENSGALG00000041616 2835 0.969 - - - - - - - 0.969 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
43. PIGG ENSGALG00000015349 314 0.969 - - - - - - - 0.969 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
44. LONRF2 ENSGALG00000016768 193 0.969 - - - - - - - 0.969 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
45. MSANTD1 ENSGALG00000015628 154 0.969 - - - - - - - 0.969 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
46. SLC16A2 ENSGALG00000007748 446 0.969 - - - - - - - 0.969 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
47. ACSBG2 ENSGALG00000001749 1681 0.969 - - - - - - - 0.969 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
48. MSC ENSGALG00000037777 1109 0.969 - - - - - - - 0.969 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
49. CCM2 ENSGALG00000005612 323 0.969 - - - - - - - 0.969 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
50. GOLGA1 ENSGALG00000001025 334 0.968 - - - - - - - 0.968 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
51. ENSGALG00000012564 ENSGALG00000012564 426 0.968 - - - - - - - 0.968 - -
52. BFAR ENSGALG00000003111 1778 0.968 - - - - - - - 0.968 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
53. COPG2 ENSGALG00000008144 4542 0.967 - - - - - - - 0.967 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
54. TATDN1 ENSGALG00000041072 1585 0.967 - - - - - - - 0.967 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
55. CXorf56 ENSGALG00000008652 7848 0.967 - - - - - - - 0.967 - - chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:HGNC:26239]
56. AFAP1L2 ENSGALG00000008999 1305 0.966 - - - - - - - 0.966 - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
57. MYBBP1A ENSGALG00000001363 10331 0.965 - - - - - - - 0.965 - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
58. TGS1 ENSGALG00000015340 5897 0.964 - - - - - - - 0.964 - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
59. SFRP2 ENSGALG00000009241 4716 0.962 - - - - - - - 0.962 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
60. OSR2 ENSGALG00000037695 2010 0.961 - - - - - - - 0.961 - - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
61. PMPCB ENSGALG00000008280 6357 0.961 - - - - - - - 0.961 - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
62. ACOT13 ENSGALG00000013632 5550 0.96 - - - - - - - 0.960 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
63. CDC7 ENSGALG00000006051 3996 0.959 - - - - - - - 0.959 - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
64. EMG1 ENSGALG00000014568 8102 0.959 - - - - - - - 0.959 - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
65. AP3S1 ENSGALG00000002341 12388 0.95 - - - - - - - 0.950 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
66. UPK3BL ENSGALG00000001885 1650 0.948 - - - - - - - 0.948 - - uroplakin 3B-like
67. LMAN2 ENSGALG00000033232 11740 0.944 - - - - - - - 0.944 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
68. CDC23 ENSGALG00000007610 11945 0.944 - - - - - - - 0.944 - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
69. DOCK7 6385 0.941 - - - - - - - 0.941 - - dedicator of cytokinesis 7, transcript variant X3
70. FAM49B ENSGALG00000036490 7984 0.937 - - - - - - - 0.937 - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
71. HECTD1 ENSGALG00000009946 1946 0.935 - - - - - - - 0.935 - - HECT domain E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20157]
72. RPN2 ENSGALG00000003815 18864 0.934 - - - - - - - 0.934 - - ribophorin II [Source:NCBI gene;Acc:419177]
73. BPTF ENSGALG00000038222 7521 0.933 - - - - - - - 0.933 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
74. LYPD6B ENSGALG00000028759 831 0.933 - - - - - - - 0.933 - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
75. DDX47 ENSGALG00000011794 4255 0.932 - - - - - - - 0.932 - - DEAD-box helicase 47 [Source:NCBI gene;Acc:417959]
76. LATS1 ENSGALG00000012386 3455 0.93 - - - - - - - 0.930 - - large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]
77. CEPT1 ENSGALG00000000142 4219 0.93 - - - - - - - 0.930 - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
78. FBXO30 ENSGALG00000041684 3033 0.93 - - - - - - - 0.930 - - F-box protein 30 [Source:HGNC Symbol;Acc:HGNC:15600]
79. WDR11 ENSGALG00000035013 3393 0.929 - - - - - - - 0.929 - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
80. RPA1 ENSGALG00000003072 8023 0.928 - - - - - - - 0.928 - - replication protein A1 [Source:NCBI gene;Acc:417563]
81. CYP51A1 ENSGALG00000009365 6996 0.927 - - - - - - - 0.927 - - cytochrome P450 family 51 subfamily A member 1 [Source:NCBI gene;Acc:420548]
82. MRPS36 ENSGALG00000014789 7584 0.926 - - - - - - - 0.926 - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
83. FAM162A ENSGALG00000007378 8290 0.924 - - - - - - - 0.924 - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
84. C2orf47 C2orf47 17769 0.916 - - - - - - 0.916 - - -
85. MED30 ENSGALG00000030862 7163 0.91 - - - - - - - 0.910 - - mediator complex subunit 30 [Source:NCBI gene;Acc:420284]
86. ENSGALG00000000514 ENSGALG00000000514 9906 0.897 - - - - - - - 0.897 - -
87. MND1 ENSGALG00000009212 11765 0.894 - - - - - - 0.894 - - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
88. C6H10ORF32 C6H10ORF32 7694 0.892 - - - - - - - 0.892 - -
89. SEC31A ENSGALG00000040484 20190 0.89 - - - - - - 0.890 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
90. POGLUT1 ENSGALG00000015480 12290 0.884 - - - - - - - 0.884 - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
91. EIF4E ENSGALG00000042112 27720 0.879 - - - - - - 0.879 - - - eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:HGNC:3287]
92. ODC1 ENSGALG00000016444 20119 0.877 - - - - - - 0.877 - - - ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]
93. ZRANB2 ENSGALG00000011340 18994 0.876 - - - - - - 0.876 - - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
94. OLFML3 ENSGALG00000001956 28633 0.875 - - - - - - - 0.875 - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
95. WDR5 ENSGALG00000002659 13008 0.871 - - - - - - 0.871 - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
96. BIRC5 ENSGALG00000008713 46856 0.867 - - - - - - 0.867 - - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
97. ACTL6A ENSGALG00000009061 13013 0.866 - - - - - - - 0.866 - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
98. NDUFB6 ENSGALG00000002033 45494 0.865 - - - - - - 0.865 - - - NADH:ubiquinone oxidoreductase subunit B6 [Source:NCBI gene;Acc:416391]
99. TMPO ENSGALG00000011504 14454 0.865 - - - - - - - 0.865 - - thymopoietin [Source:NCBI gene;Acc:417923]
100. PAFAH1B1 ENSGALG00000005834 23532 0.862 - - - - - - 0.862 - - - platelet activating factor acetylhydrolase 1b regulatory subunit 1 [Source:NCBI gene;Acc:374224]

There are 123 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA