Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIAH3

Gene Name Gene ID Reads Annotation
SIAH3 ENSGALG00000026849 384 siah E3 ubiquitin protein ligase family member 3 [Source:HGNC Symbol;Acc:HGNC:30553]











Genes with expression patterns similar to SIAH3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIAH3 ENSGALG00000026849 384 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 siah E3 ubiquitin protein ligase family member 3 [Source:HGNC Symbol;Acc:HGNC:30553]
2. HAGH ENSGALG00000005398 168 1.77 - - - - - 0.866 - 0.904 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
3. CERKL ENSGALG00000008910 70 1.609 - - - - 0.828 0.781 - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
4. CCDC148 ENSGALG00000012555 22 1.586 - - - 0.744 - 0.842 - - - - coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]
5. EP4 EP4 486 1.483 - - - 0.734 - - - 0.749 - -
6. MYT1 ENSGALG00000005932 2017 1.467 - - - - - - - - 0.705 0.762 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
7. MNX1 ENSGALG00000041154 244 1.436 - - - - - - - - 0.714 0.722 motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
8. WISP2 ENSGALG00000004154 4 0.944 - - - - - 0.944 - - - - WNT1 inducible signaling pathway protein 2 [Source:HGNC Symbol;Acc:HGNC:12770]
9. GNIH GNIH 8 0.944 - - - - - 0.944 - - - -
10. SAMD10 ENSGALG00000006007 15 0.944 - - - - - 0.944 - - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
11. ADCYAP1 ENSGALG00000014858 9 0.944 - - - - - 0.944 - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
12. UCP3 ENSGALG00000017316 30 0.944 - - - - - 0.944 - - - - uncoupling protein 3 [Source:NCBI gene;Acc:373896]
13. MYOZ1 ENSGALG00000005226 1 0.944 - - - - - 0.944 - - - - myozenin 1 [Source:HGNC Symbol;Acc:HGNC:13752]
14. TLR3 ENSGALG00000013468 35 0.944 - - - - - 0.944 - - - - toll like receptor 3 [Source:NCBI gene;Acc:422720]
15. DMC1 ENSGALG00000012236 1 0.944 - - - - - 0.944 - - - - DNA meiotic recombinase 1 [Source:HGNC Symbol;Acc:HGNC:2927]
16. GPX2 ENSGALG00000042031 4 0.944 - - - - - 0.944 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100857454]
17. TBXAS1 ENSGALG00000012791 2 0.944 - - - - - 0.944 - - - - thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]
18. MTM1 ENSGALG00000009096 22 0.944 - - - - - 0.944 - - - - myotubularin 1 [Source:HGNC Symbol;Acc:HGNC:7448]
19. SHROOM4 ENSGALG00000033953 3 0.944 - - - - - 0.944 - - - - shroom family member 4 [Source:HGNC Symbol;Acc:HGNC:29215]
20. ENSGALG00000016572 ENSGALG00000016572 79 0.944 - - - - - 0.944 - - - -
21. KCNV1 ENSGALG00000031449 64 0.944 - - - - - 0.944 - - - - potassium voltage-gated channel modifier subfamily V member 1
22. ENSGALG00000027385 ENSGALG00000027385 1 0.944 - - - - - 0.944 - - - -
23. AMMECR1 ENSGALG00000008074 5 0.944 - - - - - 0.944 - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
24. MREG ENSGALG00000003758 3 0.944 - - - - - 0.944 - - - - melanoregulin [Source:HGNC Symbol;Acc:HGNC:25478]
25. BLK ENSGALG00000016661 68 0.944 - - - - - 0.944 - - - - BLK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1057]
26. UIMC1 ENSGALG00000001158 22 0.94 - - - - - 0.940 - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
27. BRINP3 ENSGALG00000033407 40 0.938 - - - - - 0.938 - - - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
28. SDSL ENSGALG00000008317 55 0.929 - - - 0.929 - - - - - - serine dehydratase like [Source:NCBI gene;Acc:417030]
29. DCT ENSGALG00000016899 37 0.926 - - - - - - - 0.926 - - dopachrome tautomerase [Source:NCBI gene;Acc:395775]
30. NFAT5 ENSGALG00000039300 29 0.921 - - - - - 0.921 - - - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
31. NUMBL ENSGALG00000016508 12 0.906 - - - - - 0.906 - - - - numb homolog (Drosophila)-like, transcript variant X2
32. KCNG3 ENSGALG00000009919 243 0.899 - - - - - - - 0.899 - - potassium voltage-gated channel modifier subfamily G member 3 [Source:HGNC Symbol;Acc:HGNC:18306]
33. SOBP ENSGALG00000043047 147 0.896 - - - - - 0.896 - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
34. C12ORF32 C12ORF32 768 0.894 - - - - - 0.894 - - - -
35. ATXN1L ENSGALG00000028253 17 0.891 - - - - - 0.891 - - - - ataxin 1 like [Source:HGNC Symbol;Acc:HGNC:33279]
36. PPAR PPAR 70 0.891 - - - - - 0.891 - - - -
37. PLXND1 ENSGALG00000008473 21 0.891 - - - - - - - 0.891 - - plexin D1 [Source:HGNC Symbol;Acc:HGNC:9107]
38. MAPKAPK3 ENSGALG00000002283 30 0.88 - - - - - 0.880 - - - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
39. EMP1 ENSGALG00000011803 351 0.88 - - - - 0.880 - - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
40. SFI1 104 0.876 - - - - - - - 0.876 - - SFI1 centrin binding protein, transcript variant X6
41. PDXK ENSGALG00000016205 26 0.872 - - - - - - - 0.872 - - pyridoxal kinase [Source:NCBI gene;Acc:418549]
42. CNGA4 ENSGALG00000022704 4 0.871 - - - - - 0.871 - - - - cyclic nucleotide gated channel alpha 4 [Source:HGNC Symbol;Acc:HGNC:2152]
43. KLHDC8B ENSGALG00000006776 76 0.868 - - - - 0.868 - - - - - kelch domain containing 8B [Source:HGNC Symbol;Acc:HGNC:28557]
44. NOX4 ENSGALG00000017235 67 0.866 - - - - - - 0.866 - - - NADPH oxidase 4 [Source:NCBI gene;Acc:419012]
45. PANK2 ENSGALG00000015978 753 0.863 - - - - 0.863 - - - - - pantothenate kinase 2 [Source:HGNC Symbol;Acc:HGNC:15894]
46. TRAF3 ENSGALG00000011389 7 0.862 - - - - - 0.862 - - - - TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]
47. DCHS1 ENSGALG00000017334 12 0.861 - - - - - 0.861 - - - - dachsous cadherin-related 1, transcript variant X1
48. PLXNA4 ENSGALG00000006473 125 0.86 - - - - 0.860 - - - - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
49. TRPA1 ENSGALG00000034751 148 0.86 - - - - - 0.860 - - - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
50. DHX58 ENSGALG00000023821 15 0.856 - - - - - - - 0.856 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
51. CPB1 ENSGALG00000006834 25 0.856 - - - - - - - 0.856 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
52. TAGAP ENSGALG00000013747 34 0.856 - - - - - - - 0.856 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
53. UBE3C ENSGALG00000006461 57 0.856 - - - - - - - 0.856 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
54. KLF11 ENSGALG00000016440 65 0.856 - - - - - - - 0.856 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
55. ENSGALG00000018499 ENSGALG00000018499 100 0.855 - - - - - - - 0.855 - -
56. LCAT ENSGALG00000028928 484 0.852 - - - - 0.852 - - - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
57. SNORD35 SNORD35 366 0.852 - - - - 0.852 - - - - -
58. BTBD19 ENSGALG00000028978 20 0.851 - - - - 0.851 - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
59. CDH6 ENSGALG00000012917 17 0.851 - - - - 0.851 - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
60. ST8SIA1 ENSGALG00000013211 14 0.851 - - - - 0.851 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
61. gga-mir-454 ENSGALG00000033526 22 0.85 - - - - - - - 0.850 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
62. IRF-4 IRF-4 19 0.849 - - - - - - - 0.849 - -
63. MNR2 ENSGALG00000011349 3340 0.848 - - - - - - - - - 0.848 homeodomain protein
64. CLGN ENSGALG00000009826 54 0.848 - - - - 0.848 - - - - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
65. EFHC2 ENSGALG00000016221 8 0.847 - - - - - 0.847 - - - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
66. CCNF ENSGALG00000038502 194 0.845 - - - - - - - 0.845 - - cyclin F [Source:HGNC Symbol;Acc:HGNC:1591]
67. C9orf171 C9orf171 35 0.841 - - - - 0.841 - - - - -
68. PSTPIP2 ENSGALG00000040136 37 0.841 - - - - - - - 0.841 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
69. MIP-3ALPHA MIP-3ALPHA 14 0.841 - - - - - 0.841 - - - -
70. ENSGALG00000015097 ENSGALG00000015097 93 0.84 - - - - 0.840 - - - - -
71. LHFP 167 0.84 - - - - 0.840 - - - - - lipoma HMGIC fusion partner
72. FAT4 ENSGALG00000011823 774 0.839 - - - - - - - 0.839 - - FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
73. LDLRAD1 ENSGALG00000020647 128 0.836 - - - - - - - 0.836 - - low density lipoprotein receptor class A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:32069]
74. NMRK2 ENSGALG00000025751 57 0.835 - - - - 0.835 - - - - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
75. ERC2 ENSGALG00000005419 24 0.835 - - - - - 0.835 - - - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
76. SLC10A4 ENSGALG00000033908 300 0.835 - - - - - - - - - 0.835 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
77. NUAK1 ENSGALG00000012662 411 0.834 - - - - 0.834 - - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
78. SLC1A3 ENSGALG00000003582 2283 0.833 - - - - - - - 0.833 - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
79. PLCG2 ENSGALG00000033507 348 0.833 - - - - - - - 0.833 - - phospholipase C gamma 2 [Source:HGNC Symbol;Acc:HGNC:9066]
80. HMGXB3 ENSGALG00000005770 119 0.833 - - - - - - - 0.833 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
81. SENP7 ENSGALG00000044642 48 0.833 - - - - - - - 0.833 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
82. GGH ENSGALG00000031130 40 0.833 - - - - - - - 0.833 - - gamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]
83. LAPTM5 ENSGALG00000038636 18 0.833 - - - - 0.833 - - - - - lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
84. TSPAN33 ENSGALG00000013528 832 0.832 - - - - - 0.832 - - - - tetraspanin 33, transcript variant X2
85. SH3GL1 ENSGALG00000001121 159 0.832 - - - - - - - 0.832 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
86. BTK ENSGALG00000004958 272 0.831 - - - - - - - 0.831 - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
87. VIP ENSGALG00000013604 153 0.83 - - - - - - - 0.830 - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
88. PVALB1 PVALB1 267 0.828 - - - - - - - 0.828 - -
89. ODZ1 ODZ1 124 0.827 - - - - - 0.827 - - - -
90. INHBA ENSGALG00000034616 49 0.825 - - - - - - 0.825 - - - inhibin subunit beta A [Source:NCBI gene;Acc:396361]
91. LXN ENSGALG00000009651 128 0.825 - - - - 0.825 - - - - - latexin [Source:NCBI gene;Acc:771519]
92. ENSGALG00000015905 ENSGALG00000015905 5 0.824 - - - - - 0.824 - - - -
93. PARM1 ENSGALG00000010268 13 0.823 - - - - - - - 0.823 - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
94. ENSGALG00000023879 ENSGALG00000023879 9 0.823 - - - - - 0.823 - - - -
95. CHL1 ENSGALG00000037856 1565 0.822 - - - - - - - 0.822 - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
96. PPP2CA_1 ENSGALG00000006462 3170 0.82 - - - - - - - 0.820 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
97. UTS2D UTS2D 2246 0.82 - - - - - - - - - 0.820
98. ZDHHC20 ENSGALG00000017126 58 0.82 - - - - - - - 0.820 - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
99. PCTPL ENSGALG00000028681 1 0.819 - - - - - 0.819 - - - - PCTP-like protein-like
100. TMEM150C ENSGALG00000011175 218 0.818 - - - - 0.818 - - - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]

There are 163 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA