Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIAH1

Gene Name Gene ID Reads Annotation
SIAH1 ENSGALG00000003916 6682 siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]











Genes with expression patterns similar to SIAH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIAH1 ENSGALG00000003916 6682 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]
2. DNMT3B ENSGALG00000041461 12959 1.636 - - - - - - 0.814 0.822 - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
3. TDP2 ENSGALG00000013637 6595 1.574 - - - - - - 0.815 0.759 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
4. ENSGALG00000001861 ENSGALG00000001861 10150 1.567 - - - - - - 0.815 0.752 - -
5. UTP14A ENSGALG00000024039 8532 1.553 - - - - - - 0.818 0.735 - - UTP14A small subunit processome component
6. AP2M1 ENSGALG00000008432 16249 1.522 - - - - - - 0.815 0.707 - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
7. CHMP4B ENSGALG00000002095 17422 1.511 - - - - - - 0.806 0.705 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
8. YTHDF2 ENSGALG00000034831 15118 0.998 - - - - - - 0.998 - - - YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
9. PUM2 ENSGALG00000016481 23625 0.935 - - - - - - 0.935 - - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
10. TMEM39B ENSGALG00000003287 4125 0.876 - - - - - - - 0.876 - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
11. RPS15A ENSGALG00000006771 287037 0.874 - - - - - - 0.874 - - - ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
12. CHRAC1 ENSGALG00000040823 5695 0.866 - - - - - - - 0.866 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
13. NDUFS5 ENSGALG00000003625 27698 0.846 - - - - - - - 0.846 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
14. METTL11A METTL11A 11876 0.845 - - - - - - - 0.845 - -
15. TRAPPC6B ENSGALG00000010157 7567 0.844 - - - - - - - 0.844 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
16. ACRC ACRC 2547 0.84 - - - - - - - 0.840 - -
17. DAD1 ENSGALG00000035626 32604 0.839 - - - - - - - 0.839 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
18. R3HDM1 ENSGALG00000012246 6580 0.832 - - - - - - - 0.832 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
19. TIMM13 ENSGALG00000028937 32013 0.83 - - - - - - - 0.830 - - translocase of inner mitochondrial membrane 13 [Source:NCBI gene;Acc:100859352]
20. CCNC ENSGALG00000015471 6497 0.829 - - - - - - - 0.829 - - cyclin C [Source:NCBI gene;Acc:421791]
21. DDX10 ENSGALG00000017156 5657 0.829 - - - - - - - 0.829 - - DEAD-box helicase 10 [Source:NCBI gene;Acc:418965]
22. TAF2 ENSGALG00000043193 6311 0.826 - - - - - - - 0.826 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
23. NNT ENSGALG00000014869 8496 0.822 - - - - - - - 0.822 - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
24. TUSC3 ENSGALG00000013674 2848 0.819 - - - - - - 0.819 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
25. PIK3C2B ENSGALG00000037043 4522 0.819 - - - - - - 0.819 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
26. WDR48 ENSGALG00000006052 3575 0.819 - - - - - - - 0.819 - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
27. WDYHV1 ENSGALG00000030059 2961 0.819 - - - - - - 0.819 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
28. GBX-1 GBX-1 1430 0.819 - - - - - - 0.819 - - -
29. PRRC2B 1997 0.819 - - - - - - 0.819 - - - proline rich coiled-coil 2B, transcript variant X12
30. ECE-1 ECE-1 3057 0.819 - - - - - - 0.819 - - -
31. EMC3 ENSGALG00000003738 10363 0.819 - - - - - - - 0.819 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
32. RAP1GDS1 ENSGALG00000012222 10078 0.818 - - - - - - 0.818 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
33. EVL ENSGALG00000011209 5440 0.818 - - - - - - - 0.818 - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
34. KIAA0922 4430 0.818 - - - - - - 0.818 - - - KIAA0922, transcript variant X4
35. THBS4 ENSGALG00000014804 4228 0.817 - - - - - - 0.817 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
36. NUP85 ENSGALG00000007974 21249 0.817 - - - - - - - 0.817 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
37. PRRX1 ENSGALG00000003324 4859 0.816 - - - - - - 0.816 - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
38. NAP1L4 ENSGALG00000006446 10868 0.816 - - - - - - 0.816 - - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
39. MRPS27 ENSGALG00000015002 6541 0.816 - - - - - - 0.816 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
40. C11H16ORF80 C11H16ORF80 18673 0.816 - - - - - - - 0.816 - -
41. C1H21ORF33 ENSGALG00000019171 8910 0.816 - - - - - - 0.816 - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
42. HSPA14 ENSGALG00000035201 7372 0.816 - - - - - - 0.816 - - - heat shock protein family A (Hsp70) member 14
43. MAPKAPK2 ENSGALG00000000883 6174 0.816 - - - - - - 0.816 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
44. DSTN ENSGALG00000008667 82955 0.815 - - - - - - 0.815 - - - destrin, actin depolymerizing factor [Source:NCBI gene;Acc:396539]
45. ARCN1 ENSGALG00000007430 21499 0.814 - - - - - - 0.814 - - - archain 1 [Source:NCBI gene;Acc:770561]
46. CDC42BPB ENSGALG00000011432 8220 0.814 - - - - - - - 0.814 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
47. SRSF5 ENSGALG00000009421 8502 0.813 - - - - - - - 0.813 - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
48. ENSGALG00000004711 ENSGALG00000004711 7347 0.813 - - - - - - - 0.813 - -
49. ASH2L ENSGALG00000003233 4814 0.812 - - - - - - - 0.812 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
50. PUS1 ENSGALG00000002354 10153 0.811 - - - - - - - 0.811 - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
51. ZADH2 ENSGALG00000022882 11790 0.811 - - - - - - - 0.811 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
52. DHX36 ENSGALG00000043082 17619 0.811 - - - - - - 0.811 - - - DEAH-box helicase 36 [Source:HGNC Symbol;Acc:HGNC:14410]
53. BLMH ENSGALG00000004259 36907 0.81 - - - - - - - 0.810 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
54. DCPS ENSGALG00000031143 10191 0.81 - - - - - - - 0.810 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
55. TIMM8A ENSGALG00000004963 14263 0.809 - - - - - - - 0.809 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
56. SLC38A2 ENSGALG00000008497 3894 0.808 - - - - - - - 0.808 - - solute carrier family 38 member 2 [Source:NCBI gene;Acc:417807]
57. MB ENSGALG00000012541 260 0.807 - - 0.807 - - - - - - - myoglobin [Source:NCBI gene;Acc:418056]
58. AURKAIP1 ENSGALG00000001555 14715 0.805 - - - - - - 0.805 - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
59. TM4SF18 4553 0.805 - - - - - - - 0.805 - - transmembrane 4 L six family member 18, transcript variant X2
60. EEF1E1 ENSGALG00000012781 22615 0.805 - - - - - - 0.805 - - - eukaryotic translation elongation factor 1 epsilon 1
61. IARS ENSGALG00000004813 12936 0.805 - - - - - - - 0.805 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
62. DDX42 ENSGALG00000000581 8780 0.805 - - - - - - - 0.805 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
63. BRT-1 BRT-1 26083 0.804 - - - - - - 0.804 - - -
64. ANAPC16 ENSGALG00000004410 18001 0.803 - - - - - - - 0.803 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
65. KIF2A ENSGALG00000014737 16391 0.803 - - - - - - 0.803 - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
66. ENSGALG00000028938 ENSGALG00000028938 18616 0.803 - - - - - - - 0.803 - -
67. EIF5B ENSGALG00000016764 30681 0.803 - - - - - - - 0.803 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
68. PCF11 ENSGALG00000017249 4714 0.802 - - - - - - - 0.802 - - PCF11 cleavage and polyadenylation factor subunit, transcript variant X4
69. ENSGALG00000021694 ENSGALG00000021694 26011 0.802 - - - - - - 0.802 - - -
70. PSMD13 ENSGALG00000043684 14720 0.801 - - - - - - - 0.801 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
71. TMEM2 ENSGALG00000015138 4709 0.801 - - - - - - - 0.801 - - transmembrane protein 2, transcript variant X4
72. SF3B3 ENSGALG00000002531 19397 0.8 - - - - - - - 0.800 - - splicing factor 3b subunit 3, transcript variant X2
73. ANLN 10479 0.799 - - - - - - - 0.799 - - anillin actin binding protein, transcript variant X2
74. PHPT1 ENSGALG00000039061 17343 0.799 - - - - - - - 0.799 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
75. CTNNBL1 ENSGALG00000006817 6765 0.798 - - - - - - - 0.798 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
76. gga-mir-762 ENSGALG00000025437 24823 0.798 - - - - - - 0.798 - - - gga-mir-762 [Source:miRBase;Acc:MI0008209]
77. GABPB1 ENSGALG00000023440 5676 0.798 - - - - - - - 0.798 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
78. NIPA2 ENSGALG00000016737 3792 0.798 - - - - - - - 0.798 - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
79. ADI1 ENSGALG00000025796 8636 0.797 - - - - - - - 0.797 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
80. TAF13 ENSGALG00000015185 11410 0.797 - - - - - - - 0.797 - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
81. POMP ENSGALG00000017090 5504 0.797 - - - - - - - 0.797 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
82. SRSF1 ENSGALG00000005525 4376 0.796 - - - - - - - 0.796 - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
83. GFM1 ENSGALG00000009634 7213 0.796 - - - - - - - 0.796 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
84. CCDC43 ENSGALG00000001022 5462 0.795 - - - - - - - 0.795 - - coiled-coil domain containing 43 [Source:NCBI gene;Acc:419971]
85. ANAPC7 ENSGALG00000003826 5484 0.795 - - - - - - - 0.795 - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
86. C1GALT1 ENSGALG00000009752 7148 0.795 - - - - - - - 0.795 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
87. FAM174A ENSGALG00000026203 8369 0.794 - - - - - - - 0.794 - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
88. NDUFA12 ENSGALG00000011325 19807 0.794 - - - - - - - 0.794 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
89. SDF2L1 ENSGALG00000031982 6084 0.794 - - - - - - - 0.794 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
90. LARS ENSGALG00000007494 13966 0.794 - - - - - - - 0.794 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
91. GCSH ENSGALG00000032679 29231 0.793 - - - - - - - 0.793 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
92. NCBP2_1 ENSGALG00000006843 7170 0.793 - - - - - - - 0.793 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
93. SUCLA2 ENSGALG00000016993 4735 0.793 - - - - - - - 0.793 - - succinate-CoA ligase ADP-forming beta subunit [Source:NCBI gene;Acc:418857]
94. RBM45 ENSGALG00000009202 6057 0.792 - - - - - - - 0.792 - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
95. PCBP4 ENSGALG00000027695 7937 0.792 - - - - - - - 0.792 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
96. MST4 MST4 1931 0.792 - - 0.792 - - - - - - -
97. LPCAT3 ENSGALG00000014570 7919 0.791 - - - - - - - 0.791 - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
98. CCNG2 ENSGALG00000010347 9122 0.79 - - - - - - - 0.790 - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
99. MKRN1 ENSGALG00000012852 6907 0.79 - - - - - - - 0.790 - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
100. MTX2 ENSGALG00000009264 17304 0.79 - - - - - - 0.790 - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]

There are 329 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA