Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHROOM4

Gene Name Gene ID Reads Annotation
SHROOM4 ENSGALG00000033953 3 shroom family member 4 [Source:HGNC Symbol;Acc:HGNC:29215]











Genes with expression patterns similar to SHROOM4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHROOM4 ENSGALG00000033953 3 3 - - 1.000 - - 1.000 - - - 1.000 shroom family member 4 [Source:HGNC Symbol;Acc:HGNC:29215]
2. GJD4 ENSGALG00000007065 1 1 - - 1.000 - - - - - - - gap junction protein delta 4 [Source:HGNC Symbol;Acc:HGNC:23296]
3. CALCR ENSGALG00000009509 7 1 - - 1.000 - - - - - - - calcitonin receptor [Source:HGNC Symbol;Acc:HGNC:1440]
4. MFSD11 ENSGALG00000001777 8 1 - - 1.000 - - - - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
5. DEPTOR ENSGALG00000005790 6 1 - - 1.000 - - - - - - - DEP domain containing MTOR-interacting protein
6. ENSGALG00000016572 ENSGALG00000016572 79 1 - - - - - 1.000 - - - -
7. DLK1 ENSGALG00000011244 5 1 - - 1.000 - - - - - - - delta like non-canonical Notch ligand 1 [Source:NCBI gene;Acc:423459]
8. CMTM4 ENSGALG00000005251 5 1 - - 1.000 - - - - - - - CKLF like MARVEL transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19175]
9. TRPM6 3 1 - - 1.000 - - - - - - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
10. ENSGALG00000014037 ENSGALG00000014037 3 1 - - 1.000 - - - - - - -
11. IMPG1 ENSGALG00000015897 4 1 - - 1.000 - - - - - - - interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
12. KIAA1522 ENSGALG00000003539 1 1 - - 1.000 - - - - - - - KIAA1522 [Source:HGNC Symbol;Acc:HGNC:29301]
13. TBXAS1 ENSGALG00000012791 2 1 - - - - - 1.000 - - - - thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]
14. GPRC6A ENSGALG00000014925 21 1 - - 1.000 - - - - - - - G protein-coupled receptor class C group 6 member A [Source:HGNC Symbol;Acc:HGNC:18510]
15. MTM1 ENSGALG00000009096 22 1 - - - - - 1.000 - - - - myotubularin 1 [Source:HGNC Symbol;Acc:HGNC:7448]
16. ISPD ENSGALG00000010795 7 1 - - 1.000 - - - - - - - isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
17. ENSGALG00000028322 ENSGALG00000028322 19 1 - - 1.000 - - - - - - -
18. LIN7A ENSGALG00000010939 8 1 - - 1.000 - - - - - - - lin-7 homolog A, crumbs cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:17787]
19. AMMECR1 ENSGALG00000008074 5 1 - - - - - 1.000 - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
20. MREG ENSGALG00000003758 3 1 - - - - - 1.000 - - - - melanoregulin [Source:HGNC Symbol;Acc:HGNC:25478]
21. HPSE2 ENSGALG00000007508 1 1 - - 1.000 - - - - - - - heparanase 2 (inactive), transcript variant X4
22. A2ML2 ENSGALG00000014252 3 1 - - 1.000 - - - - - - - alpha-2-macroglobulin-like 2, transcript variant X6
23. BLK ENSGALG00000016661 68 1 - - - - - 1.000 - - - - BLK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1057]
24. MSGN1 ENSGALG00000016469 17 1 - - 1.000 - - - - - - - mesogenin 1 [Source:NCBI gene;Acc:395419]
25. PSKH1 5 1 - - 1.000 - - - - - - - protein serine kinase H1, transcript variant X1
26. FGA ENSGALG00000009266 291 1 - - 1.000 - - - - - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
27. KCNV1 ENSGALG00000031449 64 1 - - - - - 1.000 - - - - potassium voltage-gated channel modifier subfamily V member 1
28. ENSGALG00000027385 ENSGALG00000027385 1 1 - - - - - 1.000 - - - -
29. BTN1A1 ENSGALG00000000589 20 1 - - 1.000 - - - - - - - butyrophilin subfamily 1 member A1 [Source:NCBI gene;Acc:420061]
30. ACD ENSGALG00000044706 6 1 - - 1.000 - - - - - - - ACD, shelterin complex subunit and telomerase recruitment factor, transcript variant X4
31. KLB ENSGALG00000041663 69 1 - - - - - - - - - 1.000 klotho beta [Source:HGNC Symbol;Acc:HGNC:15527]
32. TRIM66 ENSGALG00000005958 5 1 - - 1.000 - - - - - - - tripartite motif containing 66 [Source:HGNC Symbol;Acc:HGNC:29005]
33. FSD2 ENSGALG00000005996 2 1 - - 1.000 - - - - - - - fibronectin type III and SPRY domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18024]
34. 5S_2 5S_2 58 1 - - 1.000 - - - - - - -
35. CSMD1 ENSGALG00000035230 12 1 - - 1.000 - - - - - - - CUB and Sushi multiple domains 1 [Source:HGNC Symbol;Acc:HGNC:14026]
36. GNIH GNIH 8 1 - - - - - 1.000 - - - -
37. ENSGALG00000026222 ENSGALG00000026222 3 1 - - 1.000 - - - - - - -
38. ENSGALG00000026418 ENSGALG00000026418 2 1 - - 1.000 - - - - - - -
39. RNF180 ENSGALG00000014743 3 1 - - 1.000 - - - - - - - ring finger protein 180 [Source:HGNC Symbol;Acc:HGNC:27752]
40. ENSGALG00000011567 ENSGALG00000011567 2 1 - - 1.000 - - - - - - -
41. SAMD10 ENSGALG00000006007 15 1 - - - - - 1.000 - - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
42. WISP2 ENSGALG00000004154 4 1 - - - - - 1.000 - - - - WNT1 inducible signaling pathway protein 2 [Source:HGNC Symbol;Acc:HGNC:12770]
43. KCNK10 ENSGALG00000010598 7 1 - - 1.000 - - - - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
44. GDNF ENSGALG00000003716 7 1 - - 1.000 - - - - - - - glial cell derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:4232]
45. GAS2L1 ENSGALG00000036731 2 1 - - 1.000 - - - - - - - growth arrest specific 2 like 1 [Source:HGNC Symbol;Acc:HGNC:16955]
46. FRMPD3 ENSGALG00000028975 3 1 - - 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
47. FAM71D ENSGALG00000043908 2 1 - - 1.000 - - - - - - - family with sequence similarity 71, member D
48. ABCG5 ENSGALG00000009955 4 1 - - 1.000 - - - - - - - ATP binding cassette subfamily G member 5 [Source:HGNC Symbol;Acc:HGNC:13886]
49. CROCC 5 1 - - 1.000 - - - - - - - ciliary rootlet coiled-coil, rootletin, transcript variant X6
50. ENSGALG00000004223 ENSGALG00000004223 7 1 - - 1.000 - - - - - - -
51. MYOZ1 ENSGALG00000005226 1 1 - - - - - 1.000 - - - - myozenin 1 [Source:HGNC Symbol;Acc:HGNC:13752]
52. DNAH14 ENSGALG00000045078 1 1 - - 1.000 - - - - - - - dynein, axonemal, heavy chain 14
53. TLR3 ENSGALG00000013468 35 1 - - - - - 1.000 - - - - toll like receptor 3 [Source:NCBI gene;Acc:422720]
54. DMC1 ENSGALG00000012236 1 1 - - - - - 1.000 - - - - DNA meiotic recombinase 1 [Source:HGNC Symbol;Acc:HGNC:2927]
55. GPX2 ENSGALG00000042031 4 1 - - - - - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100857454]
56. ENTPD2 ENSGALG00000039696 3 1 - - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2 [Source:NCBI gene;Acc:395797]
57. ADCYAP1 ENSGALG00000014858 9 1 - - - - - 1.000 - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
58. SLC5A12 ENSGALG00000013304 1 1 - - 1.000 - - - - - - - solute carrier family 5 member 12 [Source:HGNC Symbol;Acc:HGNC:28750]
59. SLC14A2 SLC14A2 4 1 - - 1.000 - - - - - - -
60. UCP3 ENSGALG00000017316 30 1 - - - - - 1.000 - - - - uncoupling protein 3 [Source:NCBI gene;Acc:373896]
61. ENSGALG00000026840 ENSGALG00000026840 1 1 - - 1.000 - - - - - - -
62. AQP8 10 1 - - 1.000 - - - - - - - aquaporin 8
63. CHST9 ENSGALG00000019489 21 1 - - 1.000 - - - - - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
64. K123 ENSGALG00000041978 16 1 - - 1.000 - - - - - - - K123 protein [Source:NCBI gene;Acc:395873]
65. GPR132 ENSGALG00000027407 9 1 - - 1.000 - - - - - - - G protein-coupled receptor 132, transcript variant X2
66. UIMC1 ENSGALG00000001158 22 0.995 - - - - - 0.995 - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
67. BRINP3 ENSGALG00000033407 40 0.984 - - - - - 0.984 - - - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
68. NFAT5 ENSGALG00000039300 29 0.98 - - - - - 0.980 - - - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
69. ATXN1L ENSGALG00000028253 17 0.951 - - - - - 0.951 - - - - ataxin 1 like [Source:HGNC Symbol;Acc:HGNC:33279]
70. SIAH3 ENSGALG00000026849 384 0.944 - - - - - 0.944 - - - - siah E3 ubiquitin protein ligase family member 3 [Source:HGNC Symbol;Acc:HGNC:30553]
71. NUMBL ENSGALG00000016508 12 0.94 - - - - - 0.940 - - - - numb homolog (Drosophila)-like, transcript variant X2
72. AHRR ENSGALG00000013402 2 0.935 - - 0.935 - - - - - - - aryl-hydrocarbon receptor repressor [Source:NCBI gene;Acc:420989]
73. SOBP ENSGALG00000043047 147 0.933 - - - - - 0.933 - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
74. MAPKAPK3 ENSGALG00000002283 30 0.933 - - - - - 0.933 - - - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
75. CNGA4 ENSGALG00000022704 4 0.931 - - - - - 0.931 - - - - cyclic nucleotide gated channel alpha 4 [Source:HGNC Symbol;Acc:HGNC:2152]
76. C12ORF32 C12ORF32 768 0.925 - - - - - 0.925 - - - -
77. SNORA50 SNORA50 9 0.924 - - 0.924 - - - - - - -
78. TRAF3 ENSGALG00000011389 7 0.923 - - - - - 0.923 - - - - TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]
79. TRPA1 ENSGALG00000034751 148 0.92 - - - - - 0.920 - - - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
80. DYTN ENSGALG00000008562 2 0.917 - - 0.917 - - - - - - - dystrotelin [Source:HGNC Symbol;Acc:HGNC:23279]
81. EFHC2 ENSGALG00000016221 8 0.906 - - - - - 0.906 - - - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
82. DCHS1 ENSGALG00000017334 12 0.898 - - - - - 0.898 - - - - dachsous cadherin-related 1, transcript variant X1
83. ERC2 ENSGALG00000005419 24 0.898 - - - - - 0.898 - - - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
84. ENSGALG00000010222 ENSGALG00000010222 4 0.897 - - 0.897 - - - - - - -
85. CCDC148 ENSGALG00000012555 22 0.893 - - - - - 0.893 - - - - coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]
86. TSPAN33 ENSGALG00000013528 832 0.886 - - - - - 0.886 - - - - tetraspanin 33, transcript variant X2
87. ENSGALG00000015905 ENSGALG00000015905 5 0.884 - - - - - 0.884 - - - -
88. PCTPL ENSGALG00000028681 1 0.879 - - - - - 0.879 - - - - PCTP-like protein-like
89. RELN ENSGALG00000008193 43 0.876 - - - - - 0.876 - - - - reelin [Source:NCBI gene;Acc:427850]
90. ENSGALG00000023879 ENSGALG00000023879 9 0.874 - - - - - 0.874 - - - -
91. SLC5A1 ENSGALG00000006728 36 0.869 - - - - - 0.869 - - - - solute carrier family 5 member 1 [Source:NCBI gene;Acc:395496]
92. C1S ENSGALG00000014603 80 0.869 - - - - - 0.869 - - - - complement C1s [Source:NCBI gene;Acc:418294]
93. MYBPC3 ENSGALG00000008148 315 0.867 - - 0.867 - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
94. GHRH ENSGALG00000003842 30 0.856 - - 0.856 - - - - - - - growth hormone releasing hormone [Source:NCBI gene;Acc:419178]
95. ODZ1 ODZ1 124 0.856 - - - - - 0.856 - - - -
96. CUTA ENSGALG00000001620 76 0.854 - - - - - 0.854 - - - - cutA divalent cation tolerance homolog
97. BF1 ENSGALG00000033932 18 0.854 - - - - - 0.854 - - - - MHC BF1 class I [Source:NCBI gene;Acc:693260]
98. PPAR PPAR 70 0.846 - - - - - 0.846 - - - -
99. DPF3 ENSGALG00000009352 7 0.846 - - - - - - - - - 0.846 double PHD fingers 3 [Source:NCBI gene;Acc:395351]
100. NEK7 ENSGALG00000002216 4532 0.843 - - - - - 0.843 - - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]

There are 102 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA