Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHROOM2

Gene Name Gene ID Reads Annotation
SHROOM2 ENSGALG00000030802 4517 shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]











Genes with expression patterns similar to SHROOM2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHROOM2 ENSGALG00000030802 4517 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
2. PDIA5 ENSGALG00000011689 6913 1.835 - - 0.856 - - - - 0.979 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
3. CDC42SE2 ENSGALG00000027258 4725 1.822 - - - - 0.972 - 0.850 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
4. ATG5 ENSGALG00000015387 7752 1.821 - - 0.834 - 0.987 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
5. CSNK1G1 ENSGALG00000030812 31618 1.811 - - - - 0.981 - - 0.830 - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
6. SGCE ENSGALG00000009670 3070 1.811 - - 0.823 - - - - 0.988 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
7. COIL ENSGALG00000003158 7806 1.763 - - - - 0.984 - 0.779 - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
8. RCAN3 ENSGALG00000004282 7778 1.746 - - - - 0.952 - 0.794 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
9. DNAJC12 ENSGALG00000002769 1418 1.74 - - - - 0.987 - 0.753 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
10. EAPP ENSGALG00000010007 5080 1.72 - - 0.735 - 0.985 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
11. ISCA1 ENSGALG00000012606 10342 1.716 - - 0.731 - - - - 0.985 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
12. UPF3B ENSGALG00000008618 12350 1.715 - - - - - - 0.734 0.981 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
13. REST 2394 1.715 - - 0.728 - 0.987 - - - - - RE1 silencing transcription factor
14. AES ENSGALG00000029503 17676 1.711 - - - - - - 0.787 0.924 - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
15. NAP1L1 ENSGALG00000010238 14506 1.708 - - - - 0.985 - 0.723 - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
16. XPO7 ENSGALG00000001838 1875 1.701 - - - - 0.988 - 0.713 - - - exportin 7 [Source:NCBI gene;Acc:426925]
17. RFC4 ENSGALG00000008703 5842 1.698 - - 0.755 - - - - 0.943 - - replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
18. PTPN12 9302 1.694 - - 0.748 - 0.946 - - - - - protein tyrosine phosphatase, non-receptor type 12
19. GPN3 ENSGALG00000003807 6320 1.692 - - - - 0.959 - 0.733 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
20. UBE2F ENSGALG00000003812 13874 1.665 - - - - - - 0.735 0.930 - - ubiquitin conjugating enzyme E2 F (putative) [Source:NCBI gene;Acc:424015]
21. IDI1 ENSGALG00000006723 7761 1.662 - - - - - - 0.718 0.944 - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
22. PNRC2 ENSGALG00000004122 19228 1.65 - - - - 0.946 - 0.704 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
23. URM1 ENSGALG00000004971 17880 1.649 - - 0.814 - - - 0.835 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
24. CEP70 ENSGALG00000012087 7992 1.643 - - - - 0.814 - 0.829 - - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
25. SELM SELM 6366 1.633 - - 0.800 - - - 0.833 - - -
26. WDR92 ENSGALG00000008760 3934 1.628 - - 0.837 - - - 0.791 - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
27. SEC22B ENSGALG00000039704 16080 1.614 - - 0.823 - - - 0.791 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
28. SQLE ENSGALG00000036915 4172 1.57 - - 0.812 - - - 0.758 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
29. SURF6 ENSGALG00000038413 11178 1.545 - - 0.799 - - - 0.746 - - - surfeit 6 [Source:NCBI gene;Acc:417160]
30. PRPF40A ENSGALG00000012526 7724 1.536 - - 0.758 - - - 0.778 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
31. CSTF3 ENSGALG00000011685 4711 1.521 - - 0.769 - - - 0.752 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
32. RCHY1 ENSGALG00000023335 12947 1.52 - - - - - - 0.716 0.804 - - ring finger and CHY zinc finger domain containing 1 [Source:NCBI gene;Acc:771726]
33. MBNL1 ENSGALG00000029190 3953 1.511 - - 0.771 - - - 0.740 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
34. GLRX5 ENSGALG00000011079 28943 1.504 - - - - - - 0.759 0.745 - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
35. SPG11 ENSGALG00000008180 1890 1.5 - - 0.719 - - - 0.781 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
36. SBNO1 ENSGALG00000003392 6731 1.499 - - 0.715 - - - 0.784 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
37. HNRNPLL ENSGALG00000008504 14719 1.495 - - 0.786 - - - 0.709 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
38. TSPAN6 ENSGALG00000006808 20063 1.467 - - 0.742 - - - 0.725 - - - tetraspanin 6 [Source:NCBI gene;Acc:422262]
39. SLIT2 ENSGALG00000041121 3223 1.418 - - 0.705 - - - 0.713 - - - slit guidance ligand 2 [Source:NCBI gene;Acc:373967]
40. LGMN ENSGALG00000010811 7401 0.993 - - - - - - - 0.993 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
41. BMP5 ENSGALG00000016293 2119 0.993 - - - - - - - 0.993 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
42. MFF ENSGALG00000003079 5289 0.991 - - - - - - - 0.991 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
43. MRPS31 ENSGALG00000017033 9287 0.991 - - - - - - - 0.991 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
44. OTUD4 ENSGALG00000009968 3919 0.991 - - - - - - - 0.991 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
45. KPNA1 ENSGALG00000014426 2724 0.991 - - - - - - - 0.991 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
46. NOVA1 ENSGALG00000009850 7584 0.99 - - - - - - - 0.990 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
47. WDR91 ENSGALG00000011724 5787 0.99 - - - - - - - 0.990 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
48. KCNK5 ENSGALG00000034077 3233 0.99 - - - - - - - 0.990 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
49. LYRM4 ENSGALG00000027339 2917 0.99 - - - - - - - 0.990 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
50. GNG10 ENSGALG00000015683 6905 0.99 - - - - - - - 0.990 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
51. MRPS7 ENSGALG00000007999 5445 0.989 - - - - - - - 0.989 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
52. CAPZA1 ENSGALG00000001547 24242 0.989 - - - - - - - 0.989 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
53. PM20D1 ENSGALG00000000724 2108 0.989 - - - - - - - 0.989 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
54. GOT2 ENSGALG00000002321 4961 0.988 - - - - - - - 0.988 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
55. POLR3H ENSGALG00000011947 2899 0.988 - - - - - - - 0.988 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
56. ZBTB10 ENSGALG00000034376 3271 0.988 - - - - 0.988 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
57. TCTEX1D2 ENSGALG00000027722 2201 0.988 - - - - - - - 0.988 - - Tctex1 domain containing 2
58. CCDC167 ENSGALG00000010151 3567 0.988 - - - - - - - 0.988 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
59. CEP192 ENSGALG00000035625 2270 0.988 - - - - - - - 0.988 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
60. C26H6ORF106 C26H6ORF106 2168 0.988 - - - - - - - 0.988 - -
61. PRKAR2A ENSGALG00000007023 909 0.988 - - - - - - - 0.988 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
62. IGF1R ENSGALG00000040651 772 0.988 - - - - 0.988 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
63. ARFGAP3 ENSGALG00000014140 4612 0.988 - - - - - - - 0.988 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
64. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.987 - - - - - - - 0.987 - -
65. CTSZ ENSGALG00000007462 630 0.987 - - - - 0.987 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
66. ELL2 ENSGALG00000014678 1111 0.987 - - - - 0.987 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
67. EPM2A ENSGALG00000012275 872 0.987 - - - - - - - 0.987 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
68. TLE3 ENSGALG00000008120 2655 0.987 - - - - - - - 0.987 - - transducin like enhancer of split 3, transcript variant X10
69. TNPO3 ENSGALG00000039420 5178 0.987 - - - - - - - 0.987 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
70. KNOP1 ENSGALG00000002042 6251 0.987 - - - - 0.987 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
71. ENSGALG00000011687 ENSGALG00000011687 4553 0.987 - - - - 0.987 - - - - -
72. SSPN ENSGALG00000014042 638 0.987 - - - - 0.987 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
73. CZH9ORF41 CZH9ORF41 3492 0.987 - - - - 0.987 - - - - -
74. CLIP1 ENSGALG00000004467 1058 0.987 - - - - - - - 0.987 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
75. RAB24 ENSGALG00000002984 6264 0.986 - - - - - - - 0.986 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
76. ELMO2 ENSGALG00000007246 4569 0.986 - - - - - - - 0.986 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
77. TNFRSF11B ENSGALG00000043167 911 0.986 - - - - - - - 0.986 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
78. DDX55 ENSGALG00000003298 2315 0.986 - - - - 0.986 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
79. B9D1 ENSGALG00000005096 760 0.986 - - - - - - - 0.986 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
80. WDR82 ENSGALG00000025904 4783 0.986 - - - - 0.986 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
81. COL14A1 ENSGALG00000037675 2652 0.986 - - - - - - - 0.986 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
82. TLCD1 ENSGALG00000003973 17569 0.986 - - - - 0.986 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
83. RABEP1 ENSGALG00000001737 2650 0.985 - - - - 0.985 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
84. MRPS25 ENSGALG00000008506 12131 0.985 - - - - 0.985 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
85. EEFSEC ENSGALG00000038684 298 0.985 - - - - - - - 0.985 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
86. TRAPPC12 ENSGALG00000016387 2593 0.985 - - - - 0.985 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
87. MRPL23 ENSGALG00000006561 13737 0.984 - - - - 0.984 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
88. BRMS1L ENSGALG00000010093 4964 0.984 - - - - - - - 0.984 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
89. MRPS27 ENSGALG00000015002 6541 0.984 - - - - 0.984 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
90. CBWD1 ENSGALG00000010147 2765 0.984 - - - - 0.984 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
91. FBXO9 ENSGALG00000016320 9600 0.984 - - - - 0.984 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
92. ENSGALG00000002595 ENSGALG00000002595 32163 0.983 - - - - - - - 0.983 - -
93. STK3 ENSGALG00000032850 6339 0.983 - - - - 0.983 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
94. POLR2B ENSGALG00000011387 4864 0.983 - - - - 0.983 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
95. FH ENSGALG00000013165 13669 0.983 - - - - 0.983 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
96. LATS2 4776 0.983 - - - - 0.983 - - - - - large tumor suppressor kinase 2
97. RPB6 RPB6 9517 0.982 - - - - - - - 0.982 - -
98. TCP11L1 ENSGALG00000011688 2427 0.982 - - - - 0.982 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
99. MKI67 ENSGALG00000025996 28136 0.982 - - - - 0.982 - - - - - marker of proliferation Ki-67, transcript variant X3
100. SLC25A14 ENSGALG00000004063 5574 0.982 - - - - - - - 0.982 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]

There are 763 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA