Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHQ1

Gene Name Gene ID Reads Annotation
SHQ1 ENSGALG00000007798 1982 SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]











Genes with expression patterns similar to SHQ1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHQ1 ENSGALG00000007798 1982 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
2. EIF4G3 ENSGALG00000010084 5881 1.705 - - - - - - 0.988 0.717 - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
3. GFM1 ENSGALG00000009634 7213 1.645 - - - - - - 0.929 0.716 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
4. PANX2 ENSGALG00000000003 2185 1.489 - - - - - - 0.755 0.734 - - pannexin 2 [Source:HGNC Symbol;Acc:HGNC:8600]
5. GCC2 ENSGALG00000016806 1085 0.99 - - - - - - 0.990 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
6. CAMKK2 ENSGALG00000040131 2795 0.989 - - - - - - 0.989 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
7. POPDC3 ENSGALG00000027420 700 0.989 - - - - - - 0.989 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
8. ARHGAP29 ENSGALG00000005683 3622 0.989 - - - - - - 0.989 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
9. HACE1 ENSGALG00000015415 1194 0.989 - - - - - - 0.989 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
10. UBAC1 ENSGALG00000042564 598 0.989 - - - - - - 0.989 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
11. ATN1 ENSGALG00000014554 3270 0.988 - - - - - - 0.988 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
12. CETN2 ENSGALG00000007510 1688 0.988 - - - - - - 0.988 - - - centrin 2 [Source:NCBI gene;Acc:422303]
13. KLHL29 ENSGALG00000016495 582 0.988 - - - - - - 0.988 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
14. MTFMT ENSGALG00000007353 805 0.988 - - - - - - 0.988 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
15. SREBF2 ENSGALG00000041687 4519 0.988 - - - - - - 0.988 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
16. MAP1LC3A ENSGALG00000038721 2230 0.988 - - - - - - 0.988 - - - microtubule associated protein 1 light chain 3 alpha
17. AKAP7 ENSGALG00000029794 3287 0.988 - - - - - - 0.988 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
18. DNAJA3 ENSGALG00000007821 3963 0.987 - - - - - - 0.987 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
19. SDCCAG8 ENSGALG00000010713 311 0.987 - - - - - - 0.987 - - - serologically defined colon cancer antigen 8, transcript variant X5
20. BCAS1 ENSGALG00000007796 379 0.987 - - - - - - 0.987 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
21. ENSGALG00000002923 ENSGALG00000002923 2233 0.987 - - - - - - 0.987 - - -
22. NPHP3 ENSGALG00000034586 1465 0.987 - - - - - - 0.987 - - - nephrocystin 3, transcript variant X1
23. PNO1 ENSGALG00000009093 11153 0.986 - - - - - - 0.986 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
24. SLC1A1 ENSGALG00000010187 637 0.986 - - - - - - 0.986 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
25. DISP1 3281 0.985 - - - - - - 0.985 - - - dispatched RND transporter family member 1, transcript variant X3
26. IRAK2 ENSGALG00000008407 5934 0.985 - - - - - - 0.985 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
27. LMNB2 ENSGALG00000000470 4364 0.985 - - - - - - 0.985 - - - lamin B2 [Source:NCBI gene;Acc:396222]
28. BFAR ENSGALG00000003111 1778 0.985 - - - - - - 0.985 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
29. MOB1B ENSGALG00000011573 567 0.985 - - - - - - 0.985 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
30. NDUFB8 ENSGALG00000005704 5781 0.984 - - - - - - 0.984 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
31. MOB2 ENSGALG00000030499 3658 0.984 - - - - - - 0.984 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
32. METTL11A METTL11A 11876 0.983 - - - - - - 0.983 - - -
33. MYST2 MYST2 8078 0.983 - - - - - - 0.983 - - -
34. LEPROTL1 ENSGALG00000024482 4251 0.983 - - - - - - 0.983 - - - leptin receptor overlapping transcript-like 1
35. RRN3 ENSGALG00000041989 3934 0.982 - - - - - - 0.982 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
36. YBX1 ENSGALG00000004848 20992 0.982 - - - - - - 0.982 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
37. EI24 ENSGALG00000038097 24081 0.981 - - - - - - 0.981 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
38. AK6 ENSGALG00000020534 4791 0.98 - - - - - - 0.980 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
39. INTS10 ENSGALG00000010130 6320 0.98 - - - - - - 0.980 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
40. CLCN3 ENSGALG00000009674 3704 0.98 - - - - - - 0.980 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
41. gga-mir-6643 ENSGALG00000027935 4442 0.979 - - - - - - 0.979 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
42. TMEM108 ENSGALG00000036412 2903 0.978 - - - - - - 0.978 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
43. RILPL2 ENSGALG00000003321 5632 0.976 - - - - - - 0.976 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
44. RBBP6 ENSGALG00000006043 9708 0.976 - - - - - - 0.976 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
45. ABCD3 ENSGALG00000005647 4844 0.976 - - - - - - 0.976 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
46. ARID4A ENSGALG00000012037 8554 0.976 - - - - - - 0.976 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
47. SCRN1 ENSGALG00000011176 3783 0.975 - - - - - - 0.975 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
48. AP2B1 ENSGALG00000042125 13229 0.975 - - - - - - 0.975 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
49. TBCCD1 ENSGALG00000006566 2696 0.975 - - - - - - 0.975 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
50. PPP3R1 ENSGALG00000023648 3417 0.975 - - - - - - 0.975 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
51. POLR3E ENSGALG00000007008 4010 0.975 - - - - - - 0.975 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
52. MED6 ENSGALG00000029743 9414 0.974 - - - - - - 0.974 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
53. MSRA ENSGALG00000028032 2607 0.973 - - - - - - 0.973 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
54. ENSGALG00000027854 ENSGALG00000027854 5007 0.972 - - - - - - 0.972 - - -
55. THOC2 ENSGALG00000008507 9501 0.972 - - - - - - 0.972 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
56. KCTD9 ENSGALG00000000275 3455 0.97 - - - - - - 0.970 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
57. LATS2 4776 0.969 - - - - - - 0.969 - - - large tumor suppressor kinase 2
58. DNA2 ENSGALG00000004037 5426 0.969 - - - - - - 0.969 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
59. NCOA4 ENSGALG00000002066 10544 0.968 - - - - - - 0.968 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
60. IMPACT ENSGALG00000015093 1334 0.966 - - - - - - 0.966 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
61. ATE1 ENSGALG00000009502 3751 0.965 - - - - - - 0.965 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
62. RBM12B ENSGALG00000035129 4314 0.964 - - - - - - 0.964 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
63. OGFOD1 6926 0.962 - - - - - - 0.962 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
64. E2F6 ENSGALG00000016454 4747 0.962 - - - - - - 0.962 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
65. H2AFY_1 ENSGALG00000040141 4895 0.961 - - - - - - 0.961 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
66. CCND1 ENSGALG00000007555 6715 0.959 - - - - - - 0.959 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
67. TM9SF3 ENSGALG00000005534 15290 0.959 - - - - - - 0.959 - - - transmembrane 9 superfamily member 3
68. SEMA4B ENSGALG00000008297 11202 0.959 - - - - - - 0.959 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
69. MED7 ENSGALG00000003870 4244 0.957 - - - - - - 0.957 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
70. CHMP7 ENSGALG00000000409 8967 0.957 - - - - - - 0.957 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
71. POLA1 ENSGALG00000016312 9440 0.957 - - - - - - 0.957 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
72. MRE11A MRE11A 5754 0.955 - - - - - - 0.955 - - -
73. LACTB2 ENSGALG00000038745 3460 0.954 - - - - - - 0.954 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
74. SLC25A14 ENSGALG00000004063 5574 0.95 - - - - - - 0.950 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
75. NDUFA9 ENSGALG00000017282 14358 0.95 - - - - - - 0.950 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
76. RPA1 ENSGALG00000003072 8023 0.949 - - - - - - 0.949 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
77. SDF4 ENSGALG00000001872 6382 0.948 - - - - - - 0.948 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
78. XRN1 ENSGALG00000002706 4014 0.947 - - - - - - 0.947 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
79. PRCP ENSGALG00000037521 4012 0.947 - - - - - - 0.947 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
80. RGCC ENSGALG00000016954 1282 0.946 - - - - - - 0.946 - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
81. ZMYND11 ENSGALG00000006599 5740 0.944 - - - - - - 0.944 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
82. PPIF ENSGALG00000004809 5586 0.944 - - - - - - 0.944 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
83. BTAF1 ENSGALG00000030598 3556 0.942 - - - - - - 0.942 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
84. BPTF ENSGALG00000038222 7521 0.941 - - - - - - 0.941 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
85. UBA3 ENSGALG00000013410 6923 0.938 - - - - - - 0.938 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
86. ALDH4A1 ENSGALG00000042184 9432 0.937 - - - - - - 0.937 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
87. ARNT2 ENSGALG00000006445 7050 0.936 - - - - - - 0.936 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
88. GCLM ENSGALG00000005782 15789 0.932 - - - - - - 0.932 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
89. FGD3 ENSGALG00000005237 4410 0.931 - - - - - - 0.931 - - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
90. CCDC58 ENSGALG00000014413 9022 0.931 - - - - - - 0.931 - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
91. MFGE8 ENSGALG00000006702 6976 0.929 - - - - - - 0.929 - - - milk fat globule-EGF factor 8 protein [Source:NCBI gene;Acc:415494]
92. SF3A3 ENSGALG00000001540 9664 0.922 - - - - - - 0.922 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
93. SIRT1 ENSGALG00000002761 9028 0.92 - - - - - - 0.920 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
94. POR ENSGALG00000002053 5223 0.918 - - - - - - 0.918 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
95. SOD2 ENSGALG00000011661 13178 0.918 - - - - - - 0.918 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
96. XPA ENSGALG00000028998 8621 0.916 - - - - - - 0.916 - - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
97. TRAM1 ENSGALG00000041112 22876 0.915 - - - - - - 0.915 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
98. CENPF ENSGALG00000009690 10429 0.915 - - - - - - 0.915 - - - centromere protein F [Source:NCBI gene;Acc:395357]
99. PSMG3 ENSGALG00000004203 11240 0.915 - - - - - - 0.915 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
100. ARPC4 ENSGALG00000006691 33311 0.913 - - - - - - 0.913 - - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]

There are 120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA