Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHPRH

Gene Name Gene ID Reads Annotation
SHPRH ENSGALG00000012289 992 SNF2 histone linker PHD RING helicase [Source:HGNC Symbol;Acc:HGNC:19336]











Genes with expression patterns similar to SHPRH

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHPRH ENSGALG00000012289 992 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SNF2 histone linker PHD RING helicase [Source:HGNC Symbol;Acc:HGNC:19336]
2. HPS5 ENSGALG00000027716 2466 0.868 - - - - - - - 0.868 - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
3. IMPG2 ENSGALG00000015322 74 0.837 - - - - - - - - 0.837 - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
4. CBR1 ENSGALG00000016027 619 0.826 - - - 0.826 - - - - - - carbonyl reductase 1 [Source:NCBI gene;Acc:418512]
5. TRAF2 ENSGALG00000042838 24 0.822 - - - 0.822 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
6. SMG7 ENSGALG00000004667 707 0.816 - - - 0.816 - - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
7. OTUD7B ENSGALG00000013348 38 0.815 - - - 0.815 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
8. CP ENSGALG00000030773 119 0.814 - - - 0.814 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
9. HTR1E ENSGALG00000015826 11 0.813 - - - 0.813 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
10. MTERFD3 MTERFD3 20 0.813 - - - 0.813 - - - - - -
11. ZPBP2 ENSGALG00000013484 14 0.813 - - - 0.813 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
12. ENSGALG00000024035 ENSGALG00000024035 544 0.811 - - - 0.811 - - - - - -
13. NUP160 ENSGALG00000043074 46 0.81 - - - 0.810 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
14. VEPH1 ENSGALG00000009682 51 0.809 - - - 0.809 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
15. OGDHL ENSGALG00000002266 57 0.808 - - - 0.808 - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
16. GOPC ENSGALG00000014902 352 0.807 - - - 0.807 - - - - - - golgi associated PDZ and coiled-coil motif containing, transcript variant X2
17. gga-mir-454 ENSGALG00000033526 22 0.807 - - - 0.807 - - - - - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
18. ZDHHC8 ENSGALG00000002124 35 0.805 - - - 0.805 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
19. ENSGALG00000028652 ENSGALG00000028652 65 0.804 - - - 0.804 - - - - - -
20. RFESD ENSGALG00000014673 198 0.803 - - - 0.803 - - - - - - Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
21. OXGR1 ENSGALG00000016891 13 0.802 - - - 0.802 - - - - - - oxoglutarate receptor 1
22. ENSGALG00000027104 ENSGALG00000027104 93 0.802 - - - - - - - - 0.802 -
23. KITLG ENSGALG00000011206 71 0.796 - - - 0.796 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
24. WNK1 ENSGALG00000012992 67 0.796 - - - - - - - - 0.796 - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
25. BEGAIN ENSGALG00000011236 35 0.794 - - - 0.794 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
26. ACOX2 ENSGALG00000007132 47 0.794 - - - 0.794 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
27. PWWP2B ENSGALG00000010491 30 0.793 - - 0.793 - - - - - - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
28. RGS16 ENSGALG00000033535 139 0.792 - - - 0.792 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
29. ATG2B ENSGALG00000042088 918 0.78 - - - - - - - - 0.780 - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
30. TPK1 ENSGALG00000040298 74 0.777 - - - - - - - - 0.777 - thiamin pyrophosphokinase 1 [Source:HGNC Symbol;Acc:HGNC:17358]
31. ENSGALG00000001754 ENSGALG00000001754 45 0.775 - - - - - - - - 0.775 -
32. FIG4 ENSGALG00000015070 3018 0.775 - - - - - - - - 0.775 - FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
33. ENSGALG00000025733 ENSGALG00000025733 197 0.774 - - - 0.774 - - - - - -
34. SLC8B1 ENSGALG00000008337 42 0.765 - - - - - - - - 0.765 - solute carrier family 8 member B1 [Source:HGNC Symbol;Acc:HGNC:26175]
35. TXLNG ENSGALG00000016547 503 0.765 - - - 0.765 - - - - - - taxilin gamma [Source:HGNC Symbol;Acc:HGNC:18578]
36. CYP4A22 ENSGALG00000020688 741 0.764 - - - 0.764 - - - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
37. ZNF143 ENSGALG00000005787 345 0.764 - - - 0.764 - - - - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
38. EPB41 ENSGALG00000001329 787 0.762 - - - - - - - - - 0.762 erythrocyte membrane protein band 4.1 [Source:NCBI gene;Acc:396493]
39. EPB41L4B ENSGALG00000029935 125 0.761 - - - - - - - - 0.761 - erythrocyte membrane protein band 4.1 like 4B [Source:HGNC Symbol;Acc:HGNC:19818]
40. SETDB2 ENSGALG00000017006 1353 0.758 - - - - - - - 0.758 - - SET domain bifurcated 2 [Source:HGNC Symbol;Acc:HGNC:20263]
41. SMCR8 ENSGALG00000024082 44 0.758 - - - 0.758 - - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
42. NLGN4 NLGN4 283 0.758 - - - 0.758 - - - - - -
43. C5orf30 ENSGALG00000027512 1721 0.756 - - - - - - - - 0.756 - chromosome 5 open reading frame 30 [Source:HGNC Symbol;Acc:HGNC:25052]
44. C5orf22 ENSGALG00000012909 3537 0.756 - - - - - - - - 0.756 - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
45. TAOK1 ENSGALG00000004082 77 0.755 - - - 0.755 - - - - - - TAO kinase 1 [Source:HGNC Symbol;Acc:HGNC:29259]
46. ENSGALG00000021024 ENSGALG00000021024 1339 0.755 - - - - - - - 0.755 - -
47. HEATR1 ENSGALG00000032799 2305 0.755 - - - 0.755 - - - - - - HEAT repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:25517]
48. PLIN2 ENSGALG00000015090 1290 0.754 - - - - - - - - 0.754 - perilipin 2 [Source:NCBI gene;Acc:427237]
49. PLD1 ENSGALG00000009252 2331 0.753 - - - - - - - - 0.753 - phospholipase D1, transcript variant X5
50. SCLY ENSGALG00000030194 3025 0.752 - - - 0.752 - - - - - - selenocysteine lyase [Source:NCBI gene;Acc:424739]
51. TSTD1 TSTD1 3613 0.749 - - - - - - - 0.749 - -
52. WDHD1 ENSGALG00000012199 3570 0.749 - - 0.749 - - - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
53. C2H3ORF75 C2H3ORF75 1334 0.748 - - - - - - - - 0.748 -
54. MOB3C ENSGALG00000025946 164 0.747 - - - 0.747 - - - - - - MOB kinase activator 3C [Source:HGNC Symbol;Acc:HGNC:29800]
55. GART ENSGALG00000037076 4264 0.745 - - - - - - - - 0.745 - phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase [Source:NCBI gene;Acc:395315]
56. Sep-11 Sep-11 2005 0.745 - - - 0.745 - - - - - -
57. NOTCH1 ENSGALG00000002375 726 0.745 - - - 0.745 - - - - - - notch 1 [Source:NCBI gene;Acc:395655]
58. NME6 ENSGALG00000038044 1231 0.744 - - - - - - - - 0.744 - NME/NM23 nucleoside diphosphate kinase 6
59. KCTD17 ENSGALG00000042419 90 0.743 - - - 0.743 - - - - - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
60. ENSGALG00000028657 ENSGALG00000028657 1664 0.743 - - - - - - - - 0.743 -
61. ACN9 ACN9 269 0.743 - - - - - - - - - 0.743
62. BAI3 BAI3 106 0.743 - - - 0.743 - - - - - -
63. ARHGEF5 ENSGALG00000017276 32 0.742 - - - 0.742 - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
64. TNFAIP2 ENSGALG00000011446 32 0.74 - - - 0.740 - - - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
65. GRAMD3 1685 0.739 - - 0.739 - - - - - - - GRAM domain containing 3, transcript variant X9
66. NFE2L2 ENSGALG00000009240 378 0.738 - - 0.738 - - - - - - - nuclear factor, erythroid 2 like 2 [Source:NCBI gene;Acc:396014]
67. NUAK1 ENSGALG00000012662 411 0.738 - - - 0.738 - - - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
68. MATN2 44 0.736 - - - 0.736 - - - - - - matrilin 2, transcript variant X9
69. GUCY1A2 ENSGALG00000017173 120 0.735 - - - - - - - - 0.735 - guanylate cyclase 1 soluble subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:4684]
70. SUV420H1 SUV420H1 2361 0.735 - - - - - - 0.735 - - -
71. LRIF1 ENSGALG00000000106 256 0.732 - - 0.732 - - - - - - - ligand dependent nuclear receptor interacting factor 1 [Source:HGNC Symbol;Acc:HGNC:30299]
72. SLC35D1 ENSGALG00000011121 4456 0.732 - - - - - - - - 0.732 - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
73. GPCPD1 ENSGALG00000009130 24 0.731 - - 0.731 - - - - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
74. TMEM177 ENSGALG00000011593 311 0.731 - - - 0.731 - - - - - - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
75. SCARB1 ENSGALG00000046226 428 0.73 - - - - - - - - 0.730 - scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
76. RAB1A ENSGALG00000031582 6929 0.729 - - - - - - - 0.729 - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
77. CLPX ENSGALG00000007289 6348 0.729 - - - - - - - - 0.729 - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
78. SMPD1 ENSGALG00000036106 2314 0.728 - - - - - - - 0.728 - - sphingomyelin phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:11120]
79. LRRC43 LRRC43 16 0.726 - - 0.726 - - - - - - -
80. TMEM51 ENSGALG00000035819 83 0.725 - - - - - - - - 0.725 - transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]
81. FBXL17 ENSGALG00000000276 2443 0.724 - - - 0.724 - - - - - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
82. KCTD7 ENSGALG00000002618 2182 0.723 - - - 0.723 - - - - - - potassium channel tetramerization domain containing 7 [Source:NCBI gene;Acc:417547]
83. NXT2 ENSGALG00000008092 2477 0.723 - - - - - - - - 0.723 - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
84. SNX29 ENSGALG00000039855 676 0.722 - - - - - - - - 0.722 - sorting nexin 29 [Source:HGNC Symbol;Acc:HGNC:30542]
85. OSGEPL1 ENSGALG00000037727 1879 0.721 - - - - - - - 0.721 - - O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]
86. RAD51A RAD51A 2132 0.721 - - - - - - - - 0.721 -
87. PMEPA1 ENSGALG00000037780 349 0.72 - - - 0.720 - - - - - - prostate transmembrane protein, androgen induced 1 [Source:NCBI gene;Acc:428166]
88. TMEM69 ENSGALG00000010279 716 0.72 - - - 0.720 - - - - - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
89. ENSGALG00000019568 ENSGALG00000019568 25 0.719 - - 0.719 - - - - - - -
90. TIPIN ENSGALG00000007649 3565 0.718 - - - - - - - 0.718 - - TIMELESS interacting protein [Source:NCBI gene;Acc:415548]
91. DDB1 ENSGALG00000042333 275 0.717 - - - 0.717 - - - - - - damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]
92. NUP107 ENSGALG00000009934 2097 0.717 - - - 0.717 - - - - - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
93. TRMT61B ENSGALG00000008979 615 0.717 - - - - - - - - 0.717 - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
94. PTPN9 ENSGALG00000001664 2309 0.716 - - - 0.716 - - - - - - protein tyrosine phosphatase, non-receptor type 9 [Source:NCBI gene;Acc:415308]
95. LGALSL ENSGALG00000027096 390 0.716 - - - 0.716 - - - - - - galectin like [Source:NCBI gene;Acc:421278]
96. TRADD ENSGALG00000003195 1103 0.716 - - - 0.716 - - - - - - TNFRSF1A associated via death domain [Source:HGNC Symbol;Acc:HGNC:12030]
97. DNAJC11 ENSGALG00000000627 769 0.715 - - - - - - - - 0.715 - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
98. NACC2 ENSGALG00000001728 91 0.715 - - - 0.715 - - - - - - NACC family member 2 [Source:NCBI gene;Acc:417128]
99. INPP4B ENSGALG00000009880 358 0.715 - - - 0.715 - - - - - - inositol polyphosphate-4-phosphatase type II B [Source:HGNC Symbol;Acc:HGNC:6075]
100. OSBPL9 ENSGALG00000010555 395 0.713 - - 0.713 - - - - - - - oxysterol binding protein like 9 [Source:HGNC Symbol;Acc:HGNC:16386]

There are 27 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA