Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHOC2

Gene Name Gene ID Reads Annotation
SHOC2 ENSGALG00000008771 2957 SHOC2, leucine rich repeat scaffold protein [Source:NCBI gene;Acc:423894]











Genes with expression patterns similar to SHOC2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHOC2 ENSGALG00000008771 2957 9 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 SHOC2, leucine rich repeat scaffold protein [Source:NCBI gene;Acc:423894]
2. PRPSAP2 ENSGALG00000005064 5549 0.815 - - - - - - 0.815 - - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
3. COX18 ENSGALG00000011626 474 0.806 - - - - - - - 0.806 - - cytochrome c oxidase assembly factor COX18 [Source:HGNC Symbol;Acc:HGNC:26801]
4. GTF2H3 ENSGALG00000023682 9914 0.803 - - - - - - 0.803 - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
5. TMTC2 ENSGALG00000010975 7040 0.798 - - - - - - 0.798 - - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
6. MAT2B ENSGALG00000001750 2599 0.794 - - - - - - - 0.794 - - methionine adenosyltransferase 2B [Source:HGNC Symbol;Acc:HGNC:6905]
7. FLCN ENSGALG00000004816 4101 0.784 - - - - - - - - 0.784 - folliculin, transcript variant X1
8. GLI3 ENSGALG00000040266 9981 0.779 - - - - - - 0.779 - - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
9. GNPDA2 ENSGALG00000014210 2213 0.776 - - - - - - - 0.776 - - glucosamine-6-phosphate deaminase 2, transcript variant X3
10. TTLL12 ENSGALG00000014167 714 0.775 - - - - - - - - 0.775 - tubulin tyrosine ligase like 12 [Source:NCBI gene;Acc:418227]
11. ENSGALG00000006730 ENSGALG00000006730 3695 0.773 - - - - - - - 0.773 - -
12. MED27 ENSGALG00000003683 6808 0.773 - - - - - - 0.773 - - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
13. NOP58 ENSGALG00000008454 34630 0.772 - - - - - - 0.772 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
14. DCAF7 ENSGALG00000000510 8681 0.772 - - - - - - 0.772 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
15. SUV420H1 SUV420H1 2361 0.771 - - - - - - 0.771 - - -
16. IFRD1 ENSGALG00000009448 8865 0.771 - - - - - - 0.771 - - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
17. ACADS ENSGALG00000007072 2737 0.769 - - - - - - 0.769 - - - acyl-CoA dehydrogenase short chain [Source:NCBI gene;Acc:416969]
18. SUPV3L1 ENSGALG00000004197 4141 0.766 - - - - - - 0.766 - - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
19. PTGR1 ENSGALG00000015702 3667 0.766 - - - - - - - 0.766 - - prostaglandin reductase 1 [Source:NCBI gene;Acc:427337]
20. PTRH2 ENSGALG00000005150 4756 0.765 - - - - - - - 0.765 - - peptidyl-tRNA hydrolase 2 [Source:NCBI gene;Acc:417634]
21. HCFC2 ENSGALG00000029616 4525 0.764 - - - - - - 0.764 - - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
22. SETBP1 ENSGALG00000036775 6448 0.764 - - - - - - 0.764 - - - SET binding protein 1 [Source:HGNC Symbol;Acc:HGNC:15573]
23. R3HCC1 ENSGALG00000036854 1882 0.763 - - - - - - - 0.763 - - R3H domain and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:27329]
24. MAP4K3 ENSGALG00000039720 5124 0.763 - - - - - - 0.763 - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
25. SCML2 ENSGALG00000016537 9348 0.763 - - - - - - 0.763 - - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
26. RASA2 ENSGALG00000002850 2231 0.762 - - - - - - 0.762 - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
27. DFNA5 2932 0.762 - - - - - - 0.762 - - - DFNA5, deafness associated tumor suppressor, transcript variant X4
28. PLRG1 ENSGALG00000009257 8613 0.761 - - - - - - 0.761 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
29. RHOG ENSGALG00000026995 4875 0.761 - - - - - - 0.761 - - - ras homolog family member G [Source:HGNC Symbol;Acc:HGNC:672]
30. CTSA ENSGALG00000006876 5380 0.758 - - - - - - 0.758 - - - cathepsin A [Source:NCBI gene;Acc:428163]
31. ZC3HAV1 ENSGALG00000013911 162 0.757 - - - - - - - - 0.757 - zinc finger CCCH-type containing, antiviral 1 [Source:NCBI gene;Acc:426315]
32. SP3 ENSGALG00000031796 8997 0.757 - - - - - - 0.757 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
33. ENSGALG00000009863 ENSGALG00000009863 7375 0.757 - - - - - - 0.757 - - -
34. UTP11L UTP11L 11927 0.755 - - - - - - 0.755 - - -
35. DDX19B ENSGALG00000039967 49600 0.755 - - - - - - 0.755 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
36. ATP2B1 ENSGALG00000030550 15123 0.755 - - - - - - 0.755 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
37. ANKHD1 ENSGALG00000001099 10103 0.754 - - - - - - 0.754 - - - ankyrin repeat and KH domain containing 1 [Source:NCBI gene;Acc:416143]
38. PAXIP1 ENSGALG00000036064 3120 0.752 - - - - - - 0.752 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
39. DNAJC3 ENSGALG00000016894 9048 0.751 - - - - - - 0.751 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
40. DHX37 ENSGALG00000002964 3497 0.749 - - - - - - 0.749 - - - DEAH-box helicase 37 [Source:HGNC Symbol;Acc:HGNC:17210]
41. CCNC ENSGALG00000015471 6497 0.749 - - - - - - 0.749 - - - cyclin C [Source:NCBI gene;Acc:421791]
42. PARD3B ENSGALG00000042645 2893 0.749 - - - - - - - 0.749 - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
43. NUP50 ENSGALG00000014222 11743 0.747 - - - - - - 0.747 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
44. NEK6 ENSGALG00000001118 20333 0.747 - - - - - - 0.747 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
45. SNORD38 SNORD38 537 0.746 - - - - - - - - 0.746 -
46. CZH5ORF44 CZH5ORF44 2382 0.746 - - - - - - 0.746 - - -
47. TCP11L1 ENSGALG00000011688 2427 0.746 - - - - - - 0.746 - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
48. DEF8 ENSGALG00000025712 790 0.746 - - - - - - - - 0.746 - differentially expressed in FDCP 8 homolog [Source:HGNC Symbol;Acc:HGNC:25969]
49. SEC63 ENSGALG00000015308 11596 0.744 - - - - - - 0.744 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
50. AP2A2 ENSGALG00000006799 13874 0.742 - - - - - - 0.742 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
51. DLD ENSGALG00000007931 11011 0.742 - - - - - - 0.742 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
52. ANAPC1 ENSGALG00000008254 2519 0.741 - - - - - - 0.741 - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
53. WDR48 ENSGALG00000006052 3575 0.741 - - - - - - 0.741 - - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
54. ZMYM2 ENSGALG00000017139 3747 0.741 - - - - - - - 0.741 - - zinc finger MYM-type containing 2, transcript variant X10
55. FOXK1 ENSGALG00000004460 1483 0.74 - - - - - - - - 0.740 - forkhead box K1 [Source:HGNC Symbol;Acc:HGNC:23480]
56. ACAP2 ENSGALG00000007040 4182 0.739 - - - - - - 0.739 - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
57. ZZZ3 ENSGALG00000008988 3132 0.739 - - - - - - 0.739 - - - zinc finger ZZ-type containing 3, transcript variant X5
58. YOD1 ENSGALG00000037597 2989 0.739 - - - - - - 0.739 - - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
59. CUL2 ENSGALG00000007095 9493 0.739 - - - - - - 0.739 - - - cullin 2 [Source:NCBI gene;Acc:420467]
60. TMEM167A ENSGALG00000027332 13862 0.738 - - - - - - 0.738 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
61. GSPT1 15580 0.737 - - - - - - 0.737 - - - G1 to S phase transition 1, transcript variant X1
62. TFDP1 ENSGALG00000016823 17019 0.737 - - - - - - 0.737 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
63. RAB9A ENSGALG00000016579 3262 0.737 - - - - - - - - 0.737 - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
64. CTSL2 CTSL2 7966 0.737 - - - - - - - - - 0.737
65. NEK1 ENSGALG00000009683 4305 0.736 - - - - - - 0.736 - - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
66. MRGBP ENSGALG00000005531 79 0.735 - - - - - - - - 0.735 - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
67. SCRN1 ENSGALG00000011176 3783 0.735 - - - - - - - 0.735 - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
68. KLHL21 ENSGALG00000035211 6145 0.734 - - - - - - 0.734 - - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
69. DEPDC1 ENSGALG00000011275 1264 0.734 - - - - - - - 0.734 - - DEP domain containing 1 [Source:NCBI gene;Acc:424710]
70. SLC25A20 ENSGALG00000028227 7685 0.734 - - - - - - 0.734 - - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
71. CASKIN1 604 0.733 - - - - - - - - 0.733 - CASK interacting protein 1, transcript variant X4
72. NRIP1 ENSGALG00000015681 10711 0.733 - - - - - - 0.733 - - - nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]
73. CWC27 ENSGALG00000014747 8389 0.732 - - - - - - 0.732 - - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
74. PPP1R2 ENSGALG00000029789 11594 0.73 - - - - - - 0.730 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
75. KDM1A ENSGALG00000033469 20632 0.729 - - - - - - 0.729 - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
76. WRNIP1 ENSGALG00000012856 1954 0.729 - - - - - - 0.729 - - - Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
77. NDNF ENSGALG00000011962 2261 0.728 - - - - - - 0.728 - - - neuron-derived neurotrophic factor, transcript variant X4
78. ENSGALG00000017396 ENSGALG00000017396 9028 0.728 - - - - - - 0.728 - - -
79. IFI27L2 1365 0.728 - - - - - - - - 0.728 - interferon, alpha-inducible protein 27-like 2, transcript variant X4
80. FLII ENSGALG00000004997 623 0.726 - - - - - - - - 0.726 - FLII, actin remodeling protein [Source:NCBI gene;Acc:416515]
81. USP40 ENSGALG00000004228 1137 0.726 - - - - - - - 0.726 - - ubiquitin specific peptidase 40 [Source:NCBI gene;Acc:100859211]
82. BPTF ENSGALG00000038222 7521 0.725 - - - - - - - - - 0.725 bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
83. FRAS1 ENSGALG00000010316 5008 0.725 - - - - - - 0.725 - - - Fraser extracellular matrix complex subunit 1, transcript variant X2
84. RABIF ENSGALG00000000436 6449 0.725 - - - - - - 0.725 - - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
85. TAX1BP1 ENSGALG00000042822 7728 0.724 - - - - - - 0.724 - - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
86. HOOK1 ENSGALG00000010889 1007 0.724 - - - - - - 0.724 - - - hook microtubule tethering protein 1 [Source:NCBI gene;Acc:424675]
87. CRLS1 ENSGALG00000009214 8652 0.724 - - - - - - 0.724 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
88. RTTN ENSGALG00000013745 855 0.724 - - - - - - 0.724 - - - rotatin [Source:NCBI gene;Acc:421023]
89. TEX10 ENSGALG00000013438 3121 0.724 - - - - - - 0.724 - - - testis expressed 10 [Source:NCBI gene;Acc:420993]
90. ENTHD2 684 0.724 - - - - - - - - - 0.724 ENTH domain containing 2, transcript variant X1
91. NID2 ENSGALG00000012394 6717 0.723 - - - - - - 0.723 - - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
92. PSMD12 ENSGALG00000026225 17473 0.723 - - - - - - 0.723 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
93. FAM160B1 ENSGALG00000031404 3153 0.723 - - - - - - 0.723 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
94. PTTG1 17936 0.723 - - - - - - 0.723 - - - pituitary tumor-transforming 1, transcript variant X1
95. MORF4L1 ENSGALG00000008146 29940 0.722 - - - - - - 0.722 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
96. SREK1IP1 ENSGALG00000026028 5756 0.722 - - - - - - 0.722 - - - SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
97. UBR2 ENSGALG00000009906 7717 0.722 - - - - - - 0.722 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
98. MRPL41 ENSGALG00000008746 3833 0.721 - - - - - - - 0.721 - - mitochondrial ribosomal protein L41 [Source:NCBI gene;Acc:417261]
99. LGR4 ENSGALG00000040834 5529 0.72 - - - - - - 0.720 - - - leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
100. STRN ENSGALG00000010580 7561 0.72 - - - - - - 0.720 - - - striatin [Source:HGNC Symbol;Acc:HGNC:11424]

There are 72 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA