Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SHISA4_1

Gene Name Gene ID Reads Annotation
SHISA4_1 SHISA4_1 40










Genes with expression patterns similar to SHISA4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SHISA4_1 SHISA4_1 40 4 - - - 1.000 1.000 - 1.000 - 1.000
2. pcsk5a ENSDARG00000067537 44 1.522 - - - 0.714 - - 0.808 - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
3. zgc:113102 ENSDARG00000103530, ENSDARG00000113011 86 0.905 - - - - - - 0.905 - - zgc:113102 [Source:ZFIN;Acc:ZDB-GENE-050306-35]
4. pwwp2b ENSDARG00000101080 138 0.905 - - - - - - 0.905 - - PWWP domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110930-2]
5. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 0.887 - - - - - - 0.887 - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
6. si:dkey-15h8.14 si:dkey-15h8.14 139 0.882 - - - - - - 0.882 - -
7. CABZ01068473.1 CABZ01068473.1 67 0.857 - - - - - - 0.857 - -
8. slc24a4b ENSDARG00000067509 33 0.852 - - - - - - 0.852 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
9. mibp ENSDARG00000101362 37 0.852 - - - - - - 0.852 - - muscle-specific beta 1 integrin binding protein [Source:ZFIN;Acc:ZDB-GENE-030404-1]
10. gtf3c3 ENSDARG00000043247 202 0.845 - - - - - - 0.845 - - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
11. PGBD4_6 PGBD4_6 107 0.843 - - - - - - 0.843 - -
12. ptpn4b ENSDARG00000000183 425 0.84 - - - - - - 0.840 - - protein tyrosine phosphatase, non-receptor type 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6259]
13. si:dkeyp-73d8.8 ENSDARG00000094045 17 0.838 - - - - - - 0.838 - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
14. si:dkey-247i3.1 ENSDARG00000076252 11 0.835 - - - - - - - - 0.835 si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
15. bnip1b ENSDARG00000104280 632 0.832 - - - - - - 0.832 - - BCL2 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-120203-6]
16. phox2a ENSDARG00000007406 470 0.832 - - - - - - 0.832 - - paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
17. slx4 ENSDARG00000061414, ENSDARG00000093798 44 0.832 - - - - - - 0.832 - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
18. tlcd1 ENSDARG00000002391 90 0.828 - - - - - - 0.828 - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]
19. pknox1.1_1 ENSDARG00000018765 203 0.822 - - - - - - 0.822 - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
20. CABZ01090073.1 CABZ01090073.1 4 0.821 - - - - - - - - 0.821
21. slc16a6a ENSDARG00000102793 60 0.818 - - - - - - 0.818 - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
22. trim35-27 ENSDARG00000035009 62 0.818 - - - - - - 0.818 - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
23. ush2a ENSDARG00000029482 10 0.818 - - - - - - 0.818 - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
24. napgl napgl 39 0.818 - - - - - - 0.818 - -
25. zgc:174704 10 0.815 - - - - - - - - 0.815 zgc:174704, transcript variant X2
26. cyb5r4 ENSDARG00000020898 119 0.809 - - - - - - 0.809 - - cytochrome b5 reductase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-225]
27. zbtb8os ENSDARG00000016368 284 0.807 - - - - - - 0.807 - - zinc finger and BTB domain containing 8 opposite strand [Source:ZFIN;Acc:ZDB-GENE-050417-176]
28. CR376787.1 CR376787.1 10 0.802 - - - - - - - - 0.802
29. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 0.793 - - - - - - 0.793 - - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
30. znf653 ENSDARG00000093469 149 0.792 - - - - - - 0.792 - - zinc finger protein 653 [Source:ZFIN;Acc:ZDB-GENE-071116-3]
31. kdm6al ENSDARG00000059794 545 0.791 - - - - - - 0.791 - - lysine (K)-specific demethylase 6A, like [Source:ZFIN;Acc:ZDB-GENE-070112-2002]
32. slc12a5a ENSDARG00000075815 9 0.789 - - - - - - - - 0.789 solute carrier family 12 (potassium/chloride transporter), member 5a [Source:ZFIN;Acc:ZDB-GENE-120927-3]
33. CABZ01035189.1 CABZ01035189.1 1070 0.786 - - - - - - 0.786 - -
34. adra2c ENSDARG00000069669, ENSDARG00000109788, ENSDARG00000110072 61 0.786 - - - - - - 0.786 - - adrenoceptor alpha 2C [Source:ZFIN;Acc:ZDB-GENE-021010-3]
35. atr ENSDARG00000079625 231 0.784 - - - - - - 0.784 - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
36. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 0.784 - - - - - - 0.784 - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
37. BX908759.1 BX908759.1 52 0.78 - - - - - - 0.780 - -
38. si:ch211-214j8.12 ENSDARG00000092556 65 0.778 - - - - - - 0.778 - - si:ch211-214j8.12 [Source:ZFIN;Acc:ZDB-GENE-060526-102]
39. cdc40 ENSDARG00000041226 514 0.778 - - - - - - 0.778 - - cell division cycle 40 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050116-3]
40. zgc:113030 ENSDARG00000069869 53 0.777 - - - - - - 0.777 - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
41. il2rga ENSDARG00000068858, ENSDARG00000110645 32 0.777 - - - - - - 0.777 - - interleukin 2 receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-080402-1]
42. kctd3 ENSDARG00000060854 82 0.777 - - - - - - 0.777 - - potassium channel tetramerization domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-169]
43. nog2 ENSDARG00000043066 233 0.776 - - - - - - 0.776 - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
44. zgc:152753 ENSDARG00000056443 140 0.773 - - - - - - 0.773 - - zgc:152753 [Source:ZFIN;Acc:ZDB-GENE-060818-8]
45. slc7a14a ENSDARG00000010816 425 0.773 - - - - - - 0.773 - - solute carrier family 7, member 14a [Source:ZFIN;Acc:ZDB-GENE-070912-112]
46. si:ch211-89o5.1 si:ch211-89o5.1 91 0.772 - - - 0.772 - - - - -
47. TBC1D17 ENSDARG00000005927 163 0.769 - - - - - - 0.769 - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
48. CR848836.6 CR848836.6 93 0.768 - - - - - - 0.768 - -
49. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.767 - - - - - - 0.767 - - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
50. CABZ01088365.1 CABZ01088365.1 66 0.765 - - - - - - 0.765 - -
51. CR848728.2 CR848728.2 99 0.765 - - - - - - 0.765 - -
52. BX324198.1 BX324198.1 12 0.765 - - - - - - - - 0.765
53. FAM83H FAM83H 190 0.762 - - - - - - 0.762 - -
54. nceh1b nceh1b 22 0.762 - - - - - - 0.762 - -
55. zrsr2 ENSDARG00000058448 335 0.762 - - - - - - 0.762 - - zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495]
56. ankha ENSDARG00000071724 23 0.762 - - - - - - 0.762 - - ANKH inorganic pyrophosphate transport regulator a [Source:ZFIN;Acc:ZDB-GENE-050913-33]
57. rab42a ENSDARG00000034215 692 0.762 - - - - - - 0.762 - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
58. lhfpl2a ENSDARG00000009653 35 0.762 - - - - - - 0.762 - - LHFPL tetraspan subfamily member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1839]
59. PURA PURA 172 0.762 - - - - - - 0.762 - -
60. nkd2a ENSDARG00000055271 71 0.762 - - - - - - 0.762 - - naked cuticle homolog 2a [Source:ZFIN;Acc:ZDB-GENE-071130-1]
61. si:dkeyp-84g1.3 si:dkeyp-84g1.3 25 0.762 - - - - - - 0.762 - -
62. ebf1b ENSDARG00000069196 64 0.761 - - - - - - - - 0.761 early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
63. GPRIN3 GPRIN3 169 0.761 - - - - - - 0.761 - -
64. CR388095.2 ENSDARG00000117604 76 0.759 - - - - - - 0.759 - -
65. ACOT12 ENSDARG00000054534 61 0.759 - - - - - - 0.759 - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
66. SRR SRR 544 0.755 - - - - - - 0.755 - -
67. si:ch73-196i15.3 ENSDARG00000094281 1005 0.755 - - - - - - 0.755 - - si:ch73-196i15.3 [Source:ZFIN;Acc:ZDB-GENE-091116-4]
68. CDH12_1 CDH12_1 57 0.755 - - - - - - 0.755 - -
69. CABZ01046997.2 CABZ01046997.2 7 0.755 - - - - - - 0.755 - -
70. trpc5b ENSDARG00000060837, ENSDARG00000114021 15 0.754 - - - - - - 0.754 - - transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24]
71. sept4a ENSDARG00000010385 75 0.753 - - - - - - 0.753 - - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
72. tor1 ENSDARG00000077950 1027 0.753 - - - - - - 0.753 - - torsin family 1 [Source:ZFIN;Acc:ZDB-GENE-080917-50]
73. smarcal1 ENSDARG00000102265 1921 0.751 - - - - - - 0.751 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
74. si:ch211-224l10.4 ENSDARG00000088762 36 0.747 - - - - 0.747 - - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
75. cnpy2 ENSDARG00000007207 241 0.746 - - - - - - 0.746 - - canopy FGF signaling regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060315-4]
76. gsg1l ENSDARG00000037390 181 0.746 - - - - - - 0.746 - - gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
77. TDRD7B ENSDARG00000077523 124 0.744 - - - - - - 0.744 - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
78. wu:fb63d05 wu:fb63d05 3 0.744 - - - - - - - - 0.744
79. si:dkey-245p14.4 ENSDARG00000070320 418 0.744 - - - - - - 0.744 - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
80. tmem37 ENSDARG00000059305 19 0.744 - - - - - - - - 0.744 transmembrane protein 37 [Source:ZFIN;Acc:ZDB-GENE-040426-2208]
81. mlh1 ENSDARG00000025948 130 0.744 - - - 0.744 - - - - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
82. CR847906.1 ENSDARG00000099493 88 0.744 - - - - 0.744 - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
83. si:dkey-26g8.10 si:dkey-26g8.10 100 0.742 - - - 0.742 - - - - -
84. USH1G USH1G 25 0.741 - - - - - - 0.741 - -
85. zgc:165539 ENSDARG00000027639 20 0.741 - - - - - - 0.741 - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
86. helt ENSDARG00000056400 482 0.741 - - - - - - 0.741 - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
87. DLEU7 DLEU7 91 0.741 - - - - - - 0.741 - -
88. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.741 - - - - - - 0.741 - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
89. ugt5c1 ENSDARG00000061444 6 0.741 - - - - - - 0.741 - - UDP glucuronosyltransferase 5 family, polypeptide C1 [Source:ZFIN;Acc:ZDB-GENE-050419-68]
90. CNGB3 CNGB3 7 0.741 - - - - - - 0.741 - -
91. BX957353.1 BX957353.1 10 0.741 - - - - - - 0.741 - -
92. si:dkey-199m13.1 si:dkey-199m13.1 3 0.741 - - - - - - 0.741 - -
93. ZNF337_21 ZNF337_21 53 0.741 - - - - - - 0.741 - -
94. cntn5 ENSDARG00000021584 30 0.741 - - - - - - 0.741 - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
95. zgc:114123 ENSDARG00000044956 9 0.741 - - - - - - 0.741 - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
96. CABZ01044346.1 CABZ01044346.1 12 0.741 - - - - - - 0.741 - -
97. zgc:171452 ENSDARG00000074069 6 0.741 - - - - - - 0.741 - - zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84]
98. gfra1a ENSDARG00000099732 33 0.741 - - - - - - 0.741 - - gdnf family receptor alpha 1a [Source:ZFIN;Acc:ZDB-GENE-010226-2]
99. si:dkey-30j22.3 si:dkey-30j22.3 17 0.741 - - - - - - 0.741 - -
100. cttn ENSDARG00000011777 19 0.741 - - - - - - 0.741 - - cortactin [Source:ZFIN;Acc:ZDB-GENE-040715-3]

There are 120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA