Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHISA2

Gene Name Gene ID Reads Annotation
SHISA2 1782 shisa family member 2, transcript variant X2










Genes with expression patterns similar to SHISA2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SHISA2 1782 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 shisa family member 2, transcript variant X2
2. lpl ENSDARG00000087697 2578 1.631 - - - - - 0.822 0.809 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
3. myoc ENSDARG00000021789 1631 1.553 - - 0.819 - - 0.734 - - - myocilin [Source:ZFIN;Acc:ZDB-GENE-050425-2]
4. PPFIBP1_2 PPFIBP1_2 1274 1.508 - - - - - 0.766 0.742 - -
5. cyp26b1 ENSDARG00000077121 1364 1.499 0.717 - - - - 0.782 - - - cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
6. hoxb5a ENSDARG00000013057 735 1.497 - - - - - 0.784 0.713 - - homeobox B5a [Source:ZFIN;Acc:ZDB-GENE-980526-70]
7. macf1 macf1 1862 1.495 - - - - - 0.725 0.770 - -
8. si:ch211-243g18.2 ENSDARG00000044261 4483 1.479 - - 0.712 - 0.767 - - - - si:ch211-243g18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2830]
9. TMEM186 ENSDARG00000074264, ENSDARG00000109974 245 1.454 0.738 - - - - - 0.716 - - transmembrane protein 186 [Source:ZFIN;Acc:ZDB-GENE-081022-122]
10. nkx3-1 ENSDARG00000078280 1205 1.449 - 0.709 - - - 0.740 - - - NK3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081104-238]
11. hoxa11b ENSDARG00000007009 3983 1.436 - - 0.704 - 0.732 - - - - homeobox A11b [Source:ZFIN;Acc:ZDB-GENE-990415-4]
12. ctdspl2b ENSDARG00000060586 1682 0.897 - - - - - - 0.897 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
13. cacna1sa ENSDARG00000029457 883 0.854 - - - - - 0.854 - - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
14. trappc9 ENSDARG00000103106 460 0.853 - - - - - - 0.853 - - trafficking protein particle complex 9 [Source:ZFIN;Acc:ZDB-GENE-070705-261]
15. nxn ENSDARG00000033978, ENSDARG00000115888 1683 0.846 - - - - - - 0.846 - - nucleoredoxin [Source:ZFIN;Acc:ZDB-GENE-050522-75]
16. nupr1 6040 0.845 - - - - - - 0.845 - - nuclear protein 1
17. LIMD1 LIMD1 1306 0.84 - - - - - - 0.840 - -
18. si:ch211-152p11.4 ENSDARG00000079705 2341 0.838 - 0.838 - - - - - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
19. si:dkeyp-68b7.10 ENSDARG00000095024 273 0.837 - - - - - 0.837 - - - si:dkeyp-68b7.10 [Source:ZFIN;Acc:ZDB-GENE-070912-667]
20. efemp2a ENSDARG00000094324 39261 0.837 - - - - 0.837 - - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
21. frmd6 ENSDARG00000002332 2698 0.835 - - - - - - 0.835 - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
22. SLC22A16 ENSDARG00000015869 1086 0.834 - 0.834 - - - - - - - solute carrier family 22 (organic cation/carnitine transporter), member 16 [Source:ZFIN;Acc:ZDB-GENE-041001-166]
23. setd3 ENSDARG00000016513 1507 0.833 - - - - - 0.833 - - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
24. lmo2 ENSDARG00000095019 1098 0.832 0.832 - - - - - - - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
25. smfn ENSDARG00000009806 1280 0.832 - - - - - 0.832 - - - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
26. CU929431.1 CU929431.1 2234 0.83 - - - - - 0.830 - - -
27. slc4a2a ENSDARG00000028173 1278 0.829 0.829 - - - - - - - - solute carrier family 4 (anion exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-051101-2]
28. ms4a17a.14 829 0.829 - - - - - 0.829 - - - membrane-spanning 4-domains, subfamily A, member 17A.14
29. ITGB1BP2 ENSDARG00000030176 2472 0.825 - - - - - 0.825 - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
30. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 0.825 - - - - 0.825 - - - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
31. sp9 ENSDARG00000099374 2266 0.825 - - 0.825 - - - - - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
32. opa1_1 ENSDARG00000070801 1424 0.825 - - - - - 0.825 - - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
33. slc2a12 ENSDARG00000036865, ENSDARG00000113590 148 0.824 0.824 - - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1513]
34. wdfy2 ENSDARG00000040453 406 0.822 - - 0.822 - - - - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
35. phf23a ENSDARG00000030887, ENSDARG00000115791 1918 0.82 - - - - - - 0.820 - - PHD finger protein 23a [Source:ZFIN;Acc:ZDB-GENE-050320-67]
36. lap3 ENSDARG00000061981 1188 0.82 - - - - - - 0.820 - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
37. cox11 ENSDARG00000061004, ENSDARG00000115002 423 0.818 0.818 - - - - - - - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
38. MYOF ENSDARG00000006112 436 0.818 - - 0.818 - - - - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
39. DUSP26 ENSDARG00000103752 404 0.818 - - - - - 0.818 - - - dual specificity phosphatase 26 [Source:HGNC Symbol;Acc:HGNC:28161]
40. mrpl11 ENSDARG00000013075 2927 0.814 - - - - - - 0.814 - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
41. csgalnact2 ENSDARG00000061400 741 0.813 - - - - - - 0.813 - - chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5186]
42. cbwd ENSDARG00000004318, ENSDARG00000111371 626 0.812 - - - - - - 0.812 - - COBW domain containing [Source:ZFIN;Acc:ZDB-GENE-040426-2388]
43. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 0.811 - - - - - - 0.811 - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
44. ank3b ENSDARG00000077582, ENSDARG00000110151 831 0.81 - - - - - 0.810 - - - ankyrin 3b [Source:ZFIN;Acc:ZDB-GENE-060621-2]
45. thbs4b ENSDARG00000020072 2500 0.809 - - 0.809 - - - - - - thrombospondin 4b [Source:ZFIN;Acc:ZDB-GENE-020708-4]
46. MDP1 MDP1 687 0.809 0.809 - - - - - - - -
47. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 0.809 - - - - - 0.809 - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
48. arpc5lb ENSDARG00000035433 726 0.807 - - - - - - 0.807 - - actin related protein 2/3 complex, subunit 5-like, b [Source:ZFIN;Acc:ZDB-GENE-060531-161]
49. oat ENSDARG00000078425 657 0.807 - - - - - 0.807 - - - ornithine aminotransferase [Source:ZFIN;Acc:ZDB-GENE-110411-148]
50. synpo2b ENSDARG00000077157 1009 0.807 - - - - - 0.807 - - - synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
51. kbtbd12 ENSDARG00000001882 1196 0.807 - - - - - 0.807 - - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
52. vcana ENSDARG00000103515 611 0.806 - - 0.806 - - - - - - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
53. hibadhb ENSDARG00000007959 4858 0.804 - - - - - 0.804 - - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
54. chrna1 ENSDARG00000009021 2931 0.803 - - - - - 0.803 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
55. wu:fc17b08 ENSDARG00000094249 427 0.802 - - - 0.802 - - - - - wu:fc17b08 [Source:ZFIN;Acc:ZDB-GENE-030131-2746]
56. ccdc43 ENSDARG00000054446 757 0.802 - - - - - 0.802 - - - coiled-coil domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1587]
57. wu:fb15e04 wu:fb15e04 1713 0.801 - - - - - - 0.801 - -
58. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 0.799 - - - - - - 0.799 - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
59. si:dkey-226k3.4 si:dkey-226k3.4 806 0.799 - - - - - - 0.799 - -
60. bcam ENSDARG00000090190 39912 0.798 - - - - 0.798 - - - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
61. sco2 ENSDARG00000045555 219 0.798 - - - - - - 0.798 - - SCO2 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-041210-173]
62. si:ch211-242b18.1 ENSDARG00000054723 2929 0.798 - - - - - - 0.798 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
63. tomm34 ENSDARG00000001557 1874 0.797 - - - - - 0.797 - - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
64. pdcd4a ENSDARG00000021702 7293 0.797 - 0.797 - - - - - - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
65. pdzk1ip1l pdzk1ip1l 171 0.796 0.796 - - - - - - - -
66. CABZ01113191.1 CABZ01113191.1 388 0.796 - - - - - - 0.796 - -
67. eltd1 eltd1 295 0.795 0.795 - - - - - - - -
68. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 0.794 - - - - - 0.794 - - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
69. yipf3 ENSDARG00000020449 3312 0.794 - 0.794 - - - - - - - Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
70. cmya5 ENSDARG00000061379 1423 0.793 - - - - - 0.793 - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
71. fam46c 1913 0.792 - - - - - - 0.792 - - family with sequence similarity 46, member C
72. sox10 ENSDARG00000077467 1936 0.79 - - - - - 0.790 - - - SRY (sex determining region Y)-box 10 [Source:ZFIN;Acc:ZDB-GENE-011207-1]
73. CRTC2 ENSDARG00000074910 297 0.79 - - - - - 0.790 - - - CREB regulated transcription coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2214]
74. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 0.789 - - - - - - 0.789 - - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
75. par1 par1 564 0.789 - - - - 0.789 - - - -
76. pagr1 ENSDARG00000076966 1430 0.788 - - - - - - 0.788 - - PAXIP1 associated glutamate-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4801]
77. bcat2 ENSDARG00000054849 4317 0.788 - 0.788 - - - - - - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
78. hadhaa ENSDARG00000057128 2179 0.787 - - - - - - 0.787 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
79. serpinh1b ENSDARG00000019949 11693 0.787 - - - - 0.787 - - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
80. pdap1b ENSDARG00000002967 2159 0.787 - - - - - - 0.787 - - pdgfa associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-942]
81. thoc1 ENSDARG00000088246 1718 0.787 - 0.787 - - - - - - - THO complex 1 [Source:ZFIN;Acc:ZDB-GENE-030826-9]
82. ccdc94 1417 0.786 - - - - - - 0.786 - - coiled-coil domain containing 94
83. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 0.785 - - - - - - 0.785 - - isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
84. cdk5rap3 ENSDARG00000045092, ENSDARG00000115530 717 0.785 - - - - - - 0.785 - - CDK5 regulatory subunit associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040625-90]
85. cyc1 ENSDARG00000038075 16699 0.784 - - - - - 0.784 - - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
86. pltp ENSDARG00000104495 1037 0.784 - - - - 0.784 - - - - phospholipid transfer protein [Source:ZFIN;Acc:ZDB-GENE-040801-22]
87. plekha5 ENSDARG00000045870 1177 0.783 - - - - - - 0.783 - - pleckstrin homology domain containing, family A member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-25]
88. capzb ENSDARG00000100252 10444 0.783 - - - - - 0.783 - - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
89. si:dkey-71b5.9 si:dkey-71b5.9 398 0.782 0.782 - - - - - - - -
90. sgca ENSDARG00000074156 2418 0.782 - - - - - 0.782 - - - sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]
91. mboat1 ENSDARG00000029356, ENSDARG00000114116 1793 0.782 - - 0.782 - - - - - - membrane bound O-acyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-98]
92. rgs3a ENSDARG00000099746 727 0.781 - - - - - - 0.781 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
93. trim3b ENSDARG00000005397 680 0.781 - - - - - - 0.781 - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
94. hoxc12a ENSDARG00000070352 7409 0.781 - - - - 0.781 - - - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
95. nf2b ENSDARG00000025567 1441 0.78 - - - - - 0.780 - - - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
96. AP2A1 ENSDARG00000054320 5591 0.78 - 0.780 - - - - - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
97. timm17b ENSDARG00000060124 125 0.78 - - - - - - 0.780 - - translocase of inner mitochondrial membrane 17 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-081104-144]
98. eif4h ENSDARG00000042252 6742 0.779 - 0.779 - - - - - - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
99. HERC4 ENSDARG00000059936 369 0.779 - - - - - 0.779 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
100. arih1l ENSDARG00000036870, ENSDARG00000112965 82 0.778 - - 0.778 - - - - - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]

There are 375 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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