Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHFM1

Gene Name Gene ID Reads Annotation
SHFM1 SHFM1 51606











Genes with expression patterns similar to SHFM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHFM1 SHFM1 51606 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ITPK1 ENSGALG00000034898 4212 1.584 - - - - 0.724 - 0.860 - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
3. ZNF326 ENSGALG00000006113 15141 1.582 - - - - 0.710 - 0.872 - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
4. NOLC1 ENSGALG00000041124 12765 1.577 - - - - - 0.704 0.873 - - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
5. MRPL20 ENSGALG00000001542 28764 1.504 - - - - 0.702 0.802 - - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
6. DYL1 ENSGALG00000007153 94287 0.98 - - - - - - 0.980 - - - dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
7. RPL9 ENSGALG00000000150 81866 0.96 - - - - - - 0.960 - - - ribosomal protein L9 [Source:NCBI gene;Acc:425468]
8. GNB1 ENSGALG00000001334 52398 0.941 - - - - - - 0.941 - - - G protein subunit beta 1 [Source:NCBI gene;Acc:419402]
9. PPA2 ENSGALG00000010582 22301 0.939 - - - - - - 0.939 - - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
10. XPO5 ENSGALG00000010341 24765 0.891 - - - - - - 0.891 - - - exportin 5 [Source:NCBI gene;Acc:421450]
11. C20H20ORF24 ENSGALG00000001054 22026 0.89 - - - - - - 0.890 - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
12. LRWD1 ENSGALG00000001852 13862 0.888 - - - - - - 0.888 - - - leucine rich repeats and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21769]
13. CSNK1D ENSGALG00000002719 19530 0.885 - - - - - - 0.885 - - - casein kinase 1 delta [Source:NCBI gene;Acc:417378]
14. OTUD6B ENSGALG00000041337 15657 0.885 - - - - - - 0.885 - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
15. RPN1 ENSGALG00000005907 25315 0.883 - - - - - - 0.883 - - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
16. PSMC1 ENSGALG00000010675 20633 0.882 - - - - - - 0.882 - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
17. EIF3I ENSGALG00000003337 28832 0.882 - - - - 0.882 - - - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
18. MRPL35 ENSGALG00000022950 26070 0.879 - - - - - - 0.879 - - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
19. DNAJC8 ENSGALG00000000790 19405 0.878 - - - - - - 0.878 - - - DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470]
20. MTFR1 ENSGALG00000038385 9419 0.878 - - - - - - 0.878 - - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
21. SLC25A4 ENSGALG00000010614 9970 0.877 - - - - - - 0.877 - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
22. CNBP 42704 0.876 - - - - - 0.876 - - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
23. EIF6 ENSGALG00000033993 14647 0.876 - - - - - - 0.876 - - - eukaryotic translation initiation factor 6 [Source:NCBI gene;Acc:419140]
24. NCBP1 ENSGALG00000002087 8907 0.875 - - - - - - 0.875 - - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
25. CD2AP ENSGALG00000016720 8852 0.875 - - - - - - 0.875 - - - Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
26. TUBB2B ENSGALG00000012821 41535 0.874 - - - - 0.874 - - - - - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
27. PCDH18 ENSGALG00000009732 6634 0.872 - - - - - - 0.872 - - - protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
28. GNL2 ENSGALG00000001973 10148 0.871 - - - - - - 0.871 - - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
29. SAT1 ENSGALG00000016348 8469 0.87 - - - - - - 0.870 - - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
30. NPEPL1 ENSGALG00000007533 5908 0.869 - - - - - - 0.869 - - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
31. GATC ENSGALG00000007195 8610 0.868 - - - - - - 0.868 - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
32. AP3D1 ENSGALG00000000996 16143 0.868 - - - - - - 0.868 - - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
33. NUSAP1 ENSGALG00000008584 9955 0.868 - - - - 0.868 - - - - - nucleolar and spindle associated protein 1 [Source:NCBI gene;Acc:423213]
34. ATP5A1 ATP5A1 32367 0.868 - - - - - - 0.868 - - -
35. ENPP2 ENSGALG00000032746 6086 0.867 - - - - - - 0.867 - - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
36. C9orf78 ENSGALG00000004152 7140 0.865 - - - - - - 0.865 - - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
37. E2F1 ENSGALG00000003045 5604 0.863 - - - - - - 0.863 - - - E2F transcription factor 1 [Source:NCBI gene;Acc:396142]
38. CMIP ENSGALG00000038494 5016 0.863 - - - - - - 0.863 - - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
39. SNX27 ENSGALG00000040687 3221 0.862 - - - - - - 0.862 - - - sorting nexin family member 27 [Source:NCBI gene;Acc:425666]
40. MAD2L1BP ENSGALG00000027871 7835 0.862 - - - - - - 0.862 - - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
41. BLZF1 ENSGALG00000015225 3594 0.862 - - - - - - 0.862 - - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
42. EIF2AK1 ENSGALG00000003391 3381 0.861 - - - - - - 0.861 - - - eukaryotic translation initiation factor 2 alpha kinase 1 [Source:NCBI gene;Acc:395360]
43. MED18 ENSGALG00000028149 2684 0.861 - - - - - - 0.861 - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
44. ACAD11 ENSGALG00000035949 5483 0.861 - - - - - - 0.861 - - - acyl-CoA dehydrogenase family member 11 [Source:NCBI gene;Acc:420689]
45. ING4 ENSGALG00000014457 5561 0.86 - - - - - - 0.860 - - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
46. DNAJC7 ENSGALG00000042796 14597 0.86 - - - - 0.860 - - - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
47. FURIN ENSGALG00000008341 2609 0.859 - - - - - - 0.859 - - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
48. IDH2 ENSGALG00000034434 18307 0.859 - - - - - - 0.859 - - - isocitrate dehydrogenase (NADP(+)) 2, mitochondrial [Source:NCBI gene;Acc:431056]
49. TASP1 ENSGALG00000009057 1295 0.858 - - - - - - 0.858 - - - taspase 1 [Source:NCBI gene;Acc:416741]
50. TET3 ENSGALG00000037860 3129 0.857 - - - - - - 0.857 - - - tet methylcytosine dioxygenase 3 [Source:HGNC Symbol;Acc:HGNC:28313]
51. KBTBD4 ENSGALG00000008089 1799 0.857 - - - - - - 0.857 - - - kelch repeat and BTB domain containing 4 [Source:NCBI gene;Acc:423180]
52. PRDM15 ENSGALG00000019178 2729 0.857 - - - - - - 0.857 - - - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
53. ENSGALG00000029084 ENSGALG00000029084 890 0.856 - - - - - - 0.856 - - -
54. TMSB4X ENSGALG00000026383 293046 0.839 - - - - - 0.839 - - - - Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
55. BRP44 BRP44 17093 0.836 - - - - 0.836 - - - - -
56. CCT5 ENSGALG00000013041 56190 0.835 - - - - - 0.835 - - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
57. C13H5ORF15 C13H5ORF15 11559 0.834 - - - - - - 0.834 - - -
58. MDH2 ENSGALG00000001949 68323 0.831 - - - - - 0.831 - - - - malate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:6971]
59. HSPA8 ENSGALG00000006512 124825 0.821 - - - - - 0.821 - - - - heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
60. TCF12 ENSGALG00000004304 63081 0.817 - - - - - - 0.817 - - - transcription factor 12 [Source:NCBI gene;Acc:396334]
61. EMC2 ENSGALG00000040325 16227 0.813 - - - - - - 0.813 - - - ER membrane protein complex subunit 2 [Source:NCBI gene;Acc:420273]
62. AHSA1 ENSGALG00000010463 15252 0.808 - - - - - 0.808 - - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
63. H2AFZ ENSGALG00000014023 117824 0.806 - - - - - 0.806 - - - - H2A histone family, member Z [Source:NCBI gene;Acc:426361]
64. RPS2 ENSGALG00000005490 293634 0.798 - - - - - - 0.798 - - - ribosomal protein S2 [Source:NCBI gene;Acc:416544]
65. MDH1 ENSGALG00000008858 44636 0.796 - - - - - - 0.796 - - - malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
66. RAN ENSGALG00000002569 197034 0.785 - - - - - 0.785 - - - - RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
67. HSPE1 ENSGALG00000009070 87567 0.785 - - - - - 0.785 - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
68. MSMO1 ENSGALG00000009560 6928 0.777 - - - - - 0.777 - - - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
69. PSMD7 ENSGALG00000000707 26350 0.767 - - - - - 0.767 - - - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
70. HSP90AA1 ENSGALG00000033212 55740 0.765 - - - - - 0.765 - - - - heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
71. RPB6 RPB6 9517 0.759 - - - - - 0.759 - - - -
72. TIMM17A ENSGALG00000000086 19205 0.758 - - - - - - - 0.758 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:NCBI gene;Acc:421147]
73. AP3S1 ENSGALG00000002341 12388 0.754 - - - - - - - - - 0.754 adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
74. HSPD1 ENSGALG00000008094 40870 0.748 - - - - - 0.748 - - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
75. MTMR8 ENSGALG00000007590 6022 0.747 - - - - - - - - - 0.747 myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
76. TRNT1 ENSGALG00000017368 11932 0.746 - - - - - 0.746 - - - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
77. HSP90AB1 ENSGALG00000010175 77935 0.746 - - - - - 0.746 - - - - heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
78. HSPA5 ENSGALG00000001000 40342 0.743 - - - - - 0.743 - - - - heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:NCBI gene;Acc:396487]
79. RPS14 ENSGALG00000004588 268250 0.743 - - - - 0.743 - - - - - ribosomal protein S14 [Source:NCBI gene;Acc:416275]
80. PPP4R2 ENSGALG00000007810 15127 0.742 - - - - - - - - - 0.742 protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
81. PGK1 ENSGALG00000007936 70101 0.741 - - - - - 0.741 - - - - phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
82. MIF ENSGALG00000006326 109683 0.74 - - - - - 0.740 - - - - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
83. PMM2 ENSGALG00000007326 8260 0.739 - - - - - - - - - 0.739 phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
84. ACTR6 ENSGALG00000040976 31271 0.739 - - - - 0.739 - - - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
85. SSB ENSGALG00000009677 25335 0.738 - - - - - 0.738 - - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
86. FTH FTH 121430 0.737 - - - - - - 0.737 - - -
87. NDUFA4 ENSGALG00000025999 53323 0.735 - - - - - - - - - 0.735 NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
88. SUGT1 ENSGALG00000016946 22881 0.734 - - - - 0.734 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
89. MRPL32 ENSGALG00000037258 6861 0.732 - - - - 0.732 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
90. TPP2 ENSGALG00000016865 7509 0.731 - - - - 0.731 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
91. CKAP5 ENSGALG00000008325 8494 0.731 - - - - 0.731 - - - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
92. TLK1 ENSGALG00000009569 5446 0.731 - - - - 0.731 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
93. COPA ENSGALG00000009153 11618 0.73 - - - - 0.730 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
94. FOXK2 ENSGALG00000001577 6346 0.73 - - - - 0.730 - - - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
95. MOCS2 ENSGALG00000014906 4974 0.728 - - - - 0.728 - - - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
96. CNOT2 ENSGALG00000010042 7612 0.727 - - - - 0.727 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
97. FOCAD ENSGALG00000015071 3677 0.727 - - - - 0.727 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
98. BRCC3 ENSGALG00000005383 4844 0.726 - - - - 0.726 - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
99. JSC JSC 7982 0.724 - - - - - 0.724 - - - -
100. AEN ENSGALG00000044204 2633 0.724 - - - - 0.724 - - - - - apoptosis enhancing nuclease, transcript variant X1

There are 81 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA