Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHC4

Gene Name Gene ID Reads Annotation
SHC4 245 SHC adaptor protein 4, transcript variant X1











Genes with expression patterns similar to SHC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHC4 245 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SHC adaptor protein 4, transcript variant X1
2. WSCD1 ENSGALG00000005886 539 0.858 - - - - - - 0.858 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
3. VWDE ENSGALG00000042443 160 0.839 - - - - - - 0.839 - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
4. C8orf34 ENSGALG00000034561 286 0.839 - - - - - - 0.839 - - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
5. TFB1M ENSGALG00000013647 84 0.835 - - - - - - 0.835 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
6. FAM210A ENSGALG00000013887 1828 0.835 - - - - - - 0.835 - - - family with sequence similarity 210 member A [Source:NCBI gene;Acc:421045]
7. LOC419074 ENSGALG00000017336 1885 0.833 - - - - - - 0.833 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
8. TYW5 ENSGALG00000008145 1691 0.831 - - - - - - 0.831 - - - tRNA-yW synthesizing protein 5 [Source:NCBI gene;Acc:424065]
9. EIF2AK2 ENSGALG00000010560 749 0.828 - - - - - - 0.828 - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
10. SORCS1 ENSGALG00000008465 468 0.825 - - - - - - 0.825 - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
11. PIBF1 ENSGALG00000016929 593 0.825 - - - - - - 0.825 - - - progesterone immunomodulatory binding factor 1 [Source:HGNC Symbol;Acc:HGNC:23352]
12. RNF170 ENSGALG00000015386 296 0.816 - - - - - - 0.816 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
13. GRID1 ENSGALG00000037366 159 0.815 - - - - - - 0.815 - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
14. PPAPDC2 PPAPDC2 1976 0.814 - - - - - - 0.814 - - -
15. ZFYVE16 ENSGALG00000015576 287 0.812 - - - - - - 0.812 - - - zinc finger FYVE-type containing 16, transcript variant X3
16. LYRM1 ENSGALG00000002273 1523 0.811 - - - - - - 0.811 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
17. ANAPC7 ENSGALG00000003826 5484 0.81 - - - - - - 0.810 - - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
18. CAT-1 CAT-1 115 0.8 - - - - - - 0.800 - - -
19. ACBD7 ENSGALG00000019663 2328 0.797 - - - - - - 0.797 - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
20. PANX1 ENSGALG00000039751 70 0.796 - - - - - - 0.796 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
21. LOC112532477 ENSGALG00000027520 40 0.796 - - - - - - 0.796 - - - fibrinogen-like protein 1-like protein
22. KLF4 ENSGALG00000026928 184 0.796 - - - - - - 0.796 - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
23. SYT8 ENSGALG00000006602 369 0.796 - - - - - - 0.796 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
24. SNRNP25 ENSGALG00000026559 2097 0.795 - - - - - - 0.795 - - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
25. USP42 ENSGALG00000003378 1392 0.794 - - - - - - 0.794 - - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
26. WDR35 157 0.793 - - - - - - 0.793 - - - WD repeat domain 35, transcript variant X1
27. MBL2 ENSGALG00000002507 17 0.791 - - - - - - 0.791 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
28. CBLN1 ENSGALG00000042664 15 0.791 - - - - - - 0.791 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
29. MAP3K19 ENSGALG00000028457 17 0.791 - - - - - - 0.791 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
30. ARHGAP12 ENSGALG00000007254 479 0.791 - - - - - - 0.791 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
31. MTOR ENSGALG00000003339 328 0.791 - - - - - - 0.791 - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
32. METAP1 ENSGALG00000012239 1125 0.791 - - - - - - 0.791 - - - methionyl aminopeptidase 1 [Source:NCBI gene;Acc:422704]
33. CHST9 ENSGALG00000019489 21 0.791 - - - - - - 0.791 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
34. FAM46C 13 0.791 - - - - - - 0.791 - - - family with sequence similarity 46 member C
35. SCTR ENSGALG00000012106 49 0.79 - - - - - - 0.790 - - - secretin receptor [Source:NCBI gene;Acc:770943]
36. EFCAB7 ENSGALG00000010998 13 0.79 - - - - - - 0.790 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
37. TTC38 ENSGALG00000014551 1135 0.789 - - - - - - 0.789 - - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
38. PTPN21 ENSGALG00000010616 129 0.789 - - - - - - 0.789 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
39. SEMA3D ENSGALG00000006563 655 0.788 - - - - - - 0.788 - - - semaphorin 3D [Source:NCBI gene;Acc:396332]
40. OGG1 ENSGALG00000006651 1320 0.787 - - - - - - 0.787 - - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
41. TNFRSF1A ENSGALG00000039461 1569 0.787 - - - - - - 0.787 - - - TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
42. SLC2A9 ENSGALG00000014971 751 0.786 - - - - - - 0.786 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
43. EMC8 ENSGALG00000005744 9422 0.785 - - - - - - 0.785 - - - ER membrane protein complex subunit 8
44. ENSGALG00000026941 ENSGALG00000026941 653 0.784 - - - - - - 0.784 - - -
45. HN1L HN1L 247 0.784 - - - - - - 0.784 - - -
46. C10ORF58 C10ORF58 5045 0.784 - - - - - - 0.784 - - -
47. FOXRED1 ENSGALG00000046347 4176 0.784 - - - - - - 0.784 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
48. RASA1 ENSGALG00000017706 224 0.783 - - - - - - 0.783 - - - RAS p21 protein activator 1
49. FAM69A ENSGALG00000005918 157 0.782 - - - - - - 0.782 - - - family with sequence similarity 69 member A, transcript variant X4
50. PLK4 ENSGALG00000010195 514 0.781 - - - - - - 0.781 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
51. KIAA1244 KIAA1244 62 0.78 - - - - - - 0.780 - - -
52. SERPINI1 ENSGALG00000009470 3819 0.779 - - - - - - 0.779 - - - serpin family I member 1 [Source:NCBI gene;Acc:425002]
53. ADAP2 ENSGALG00000003319 134 0.777 - - - - - - 0.777 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
54. AADAT ENSGALG00000009655 1692 0.776 - - - - - - 0.776 - - - aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
55. AFG3L2 ENSGALG00000013853 1138 0.776 - - - - - - 0.776 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
56. LOC769139 ENSGALG00000026754 753 0.776 - - - - - - 0.776 - - - feather keratin 1-like, transcript variant X2
57. DEGS1 ENSGALG00000009330 3599 0.776 - - - - - - 0.776 - - - delta 4-desaturase, sphingolipid 1 [Source:NCBI gene;Acc:421327]
58. PCDH11X ENSGALG00000006851 314 0.775 - - - - - - 0.775 - - - protocadherin 11 X-linked, transcript variant X1
59. SLC16A14 ENSGALG00000002897 157 0.774 - - - - - - 0.774 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
60. SNX10 ENSGALG00000011046 333 0.771 - - - - - - 0.771 - - - sorting nexin 10 [Source:NCBI gene;Acc:420628]
61. DUSP10 ENSGALG00000009450 1041 0.769 - - - - - - 0.769 - - - dual specificity phosphatase 10 [Source:NCBI gene;Acc:421340]
62. SMAD3 ENSGALG00000035701 161 0.769 - - - - - - 0.769 - - - SMAD family member 3 [Source:NCBI gene;Acc:395132]
63. ASH1L ENSGALG00000014638 803 0.768 - - - - - - 0.768 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
64. TAP1 ENSGALG00000035075 54 0.766 - - - - - - 0.766 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
65. GGT7 ENSGALG00000001062 476 0.766 - - - - - - 0.766 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
66. SDC4 ENSGALG00000003932 3 0.765 - - - - - 0.765 - - - - syndecan 4 [Source:NCBI gene;Acc:419184]
67. LONRF1 ENSGALG00000013725 1508 0.762 - - - - - - 0.762 - - - LON peptidase N-terminal domain and ring finger 1 [Source:HGNC Symbol;Acc:HGNC:26302]
68. CXADR ENSGALG00000015701 96 0.762 - - - - - - 0.762 - - - coxsackie virus and adenovirus receptor, transcript variant X2
69. CENPT ENSGALG00000028900 674 0.762 - - - - - - 0.762 - - - centromere protein T [Source:NCBI gene;Acc:415654]
70. H2A-VII ENSGALG00000027113, ENSGALG00000027315, ENSGALG00000028372, ENSGALG00000029941, ENSGALG00000031571, ENSGALG00000032645, ENSGALG00000035715 823 0.761 - - - - - - 0.761 - - - histone cluster 1, H2A-IV-like 4 [Source:NCBI gene;Acc:427895]
71. MYLIP ENSGALG00000012704 983 0.759 - - - - - - 0.759 - - - myosin regulatory light chain interacting protein [Source:NCBI gene;Acc:420841]
72. MYL1 ENSGALG00000002907 1300 0.759 - - - - - - 0.759 - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
73. ZBTB10 ENSGALG00000034376 3271 0.758 - - - - - - 0.758 - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
74. FANCA ENSGALG00000000516 250 0.758 - - - - - - 0.758 - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
75. GALM ENSGALG00000013828 1546 0.756 - - - - - - 0.756 - - - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
76. RAB22A ENSGALG00000007554 201 0.756 - - - - - - 0.756 - - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
77. B4GALT4 ENSGALG00000015069 1315 0.754 - - - - - - 0.754 - - - beta-1,4-galactosyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:927]
78. KCNK2 ENSGALG00000009687 1552 0.754 - - - - - - 0.754 - - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
79. ANO6 ENSGALG00000009638 470 0.753 - - - - - - 0.753 - - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
80. NUDT14 ENSGALG00000028940 3795 0.753 - - - - - - 0.753 - - - nudix hydrolase 14 [Source:NCBI gene;Acc:423501]
81. SLCO3A1 ENSGALG00000006871 1125 0.753 - - - - - - 0.753 - - - solute carrier organic anion transporter family member 3A1 [Source:HGNC Symbol;Acc:HGNC:10952]
82. ENSGALG00000013357 ENSGALG00000013357 2282 0.752 - - - - - - 0.752 - - -
83. MSTO1 ENSGALG00000019794 1692 0.752 - - - - - - 0.752 - - - misato 1, mitochondrial distribution and morphology regulator [Source:HGNC Symbol;Acc:HGNC:29678]
84. MADD ENSGALG00000008181 2273 0.752 - - - - - - 0.752 - - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
85. LGI2 ENSGALG00000043283 433 0.752 - - - - - - 0.752 - - - leucine rich repeat LGI family member 2 [Source:NCBI gene;Acc:422809]
86. PPP2R3A ENSGALG00000034512 1091 0.751 - - - - - - 0.751 - - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
87. NCOA5 ENSGALG00000007009 299 0.75 - - - - - - 0.750 - - - nuclear receptor coactivator 5 [Source:HGNC Symbol;Acc:HGNC:15909]
88. KIAA1456 230 0.75 - - - - - - 0.750 - - - KIAA1456, transcript variant X2
89. PDZD8 ENSGALG00000029095 1068 0.75 - - - - - - 0.750 - - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
90. CSRP2BP CSRP2BP 4679 0.75 - - - - - - 0.750 - - -
91. TMEM65 ENSGALG00000037371 776 0.746 - - - - - - 0.746 - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
92. GPR126 GPR126 661 0.746 - - - - - - 0.746 - - -
93. MIA3 ENSGALG00000041034 2038 0.744 - - - - - - 0.744 - - - MIA family member 3, ER export factor [Source:NCBI gene;Acc:421337]
94. TIPARP ENSGALG00000010256 1825 0.743 - - - - - - 0.743 - - - TCDD inducible poly(ADP-ribose) polymerase [Source:HGNC Symbol;Acc:HGNC:23696]
95. RPE65 ENSGALG00000011259 51 0.743 - - - - - - 0.743 - - - RPE65, retinoid isomerohydrolase [Source:NCBI gene;Acc:395700]
96. NACAD 679 0.742 - - - - - - - 0.742 - - NAC alpha domain containing, transcript variant X1
97. TP73 ENSGALG00000001006 335 0.74 - - - - - - 0.740 - - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
98. AAGAB ENSGALG00000007887 142 0.738 - - - - - - 0.738 - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
99. SPTLC2 ENSGALG00000031928 443 0.737 - - - - - - 0.737 - - - serine palmitoyltransferase long chain base subunit 2 [Source:NCBI gene;Acc:423379]
100. MYF5 ENSGALG00000028091 1965 0.737 - - - - - - 0.737 - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]

There are 41 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA