Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHC3

Gene Name Gene ID Reads Annotation
SHC3 ENSDARG00000098909 332 SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]










Genes with expression patterns similar to SHC3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SHC3 ENSDARG00000098909 332 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
2. st18 663 2.576 - - - 0.795 - 0.815 0.966 - - suppression of tumorigenicity 18, zinc finger
3. si:dkey-100n10.2 101 2.513 - - - 0.847 - 0.848 0.818 - - si:dkey-100n10.2
4. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 2.496 0.758 - - - - 0.841 0.897 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
5. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.466 0.776 - - - - 0.809 0.881 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
6. CLIP3 ENSDARG00000054456 734 2.428 - - - 0.774 - 0.787 0.867 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
7. kif1ab ENSDARG00000062024 794 2.425 0.763 - - - - 0.822 0.840 - - kinesin family member 1Ab [Source:ZFIN;Acc:ZDB-GENE-070912-480]
8. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.425 - - - 0.745 - 0.829 0.851 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
9. gng2_1 ENSDARG00000056831 113 2.369 - - - 0.841 - 0.751 0.777 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
10. ek1 ENSDARG00000020080 742 2.334 0.742 - - - - 0.729 0.863 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
11. bcr ENSDARG00000079286 578 2.309 0.718 - - - - 0.792 0.799 - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
12. atp6ap1a ENSDARG00000041417 898 2.296 - - - 0.737 - 0.816 0.743 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
13. C19H7orf41 C19H7orf41 2243 2.289 - - - 0.719 - 0.807 0.763 - -
14. nexmifb ENSDARG00000029296 416 2.288 0.722 - - - - 0.776 0.790 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
15. cbx1b ENSDARG00000054442 1206 2.246 0.788 - - 0.709 - - 0.749 - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
16. syn1 ENSDARG00000060368, ENSDARG00000111164 397 2.225 - 0.718 - - - 0.717 0.790 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
17. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.171 - - - 0.719 - 0.706 0.746 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
18. her4.3 ENSDARG00000070770 613 1.821 0.860 - - - - - 0.961 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
19. CASS4 ENSDARG00000006775 760 1.809 - - - - - 0.846 0.963 - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
20. INSM2 ENSDARG00000020655 122 1.806 0.881 - - - - - 0.925 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
21. b3galnt2 ENSDARG00000046133 68 1.798 0.902 - - - - - 0.896 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
22. atp2b3b ENSDARG00000023445 1424 1.79 - - - - - 0.819 0.971 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
23. kiaa1549la ENSDARG00000062477 143 1.789 - - - - - 0.859 0.930 - - KIAA1549-like a [Source:ZFIN;Acc:ZDB-GENE-061207-55]
24. nrn1a ENSDARG00000071860 1311 1.787 - - - - - 0.861 0.926 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
25. olig2 ENSDARG00000040946 1405 1.784 0.819 - - - - - 0.965 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
26. syt11a ENSDARG00000057913 1145 1.784 - - - - - 0.844 0.940 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
27. st6gal1 ENSDARG00000044514 142 1.78 - - - - - 0.824 0.956 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
28. ADAM22 ENSDARG00000060532 2259 1.769 - - - - - 0.840 0.929 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
29. MAP6 MAP6 643 1.757 - - - - - 0.828 0.929 - -
30. CABZ01051991.1 CABZ01051991.1 346 1.756 - - - 0.824 - - 0.932 - -
31. atp1b4 ENSDARG00000053262 1337 1.754 - - - - - 0.835 0.919 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
32. hmp19 2554 1.754 - - - - - 0.800 0.954 - - HMP19 protein
33. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.753 - - - 0.805 - - 0.948 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
34. MAP4 MAP4 315 1.752 - - - - - 0.833 0.919 - -
35. C7H4orf48 C7H4orf48 1455 1.749 - - - - - 0.814 0.935 - -
36. CDK5R1 CDK5R1 562 1.746 - - - 0.823 - - 0.923 - -
37. atpv0e2 ENSDARG00000059057 585 1.74 - - - - - 0.787 0.953 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
38. slc6a1b ENSDARG00000039647 1301 1.739 - - - - - 0.789 0.950 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
39. her15.2 her15.2 1701 1.738 - - - - - 0.786 0.952 - -
40. nptx1l ENSDARG00000074671 569 1.738 - - - - - 0.806 0.932 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
41. TTBK1_1 TTBK1_1 132 1.737 - - - - - 0.783 0.954 - -
42. zic4 ENSDARG00000031307 1228 1.737 - - - - - 0.867 0.870 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
43. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.734 - - - - - 0.790 0.944 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
44. sox2 ENSDARG00000070913 2763 1.734 - - - - - 0.779 0.955 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
45. adam23a ENSDARG00000062323 580 1.733 - - - 0.791 - - 0.942 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
46. rnft2 ENSDARG00000053019 270 1.728 0.864 - - - - - 0.864 - - ring finger protein, transmembrane 2 [Source:ZFIN;Acc:ZDB-GENE-050522-168]
47. tnika ENSDARG00000056218 728 1.724 - - - - - 0.810 0.914 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
48. PPP1R9B PPP1R9B 855 1.723 0.774 - - - - - 0.949 - -
49. dnajc6 ENSDARG00000079891 438 1.723 - - - - - 0.775 0.948 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
50. mnx2b ENSDARG00000030350 484 1.72 0.776 - - - - - 0.944 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
51. clvs2 ENSDARG00000053122 1390 1.716 - - - 0.788 - - 0.928 - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
52. slc1a3a ENSDARG00000104431 9888 1.715 - - - - - 0.801 0.914 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
53. ncana 1537 1.714 - - - - - 0.822 0.892 - - neurocan a
54. cnrip1a ENSDARG00000091683 1491 1.712 - - - - - 0.837 0.875 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
55. pcdh1gc5 ENSDARG00000104826 10052 1.711 - - - - - 0.784 0.927 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
56. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.71 - - - - - 0.764 0.946 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
57. spock2 ENSDARG00000075393 791 1.709 - - - - - 0.847 0.862 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
58. zic1 ENSDARG00000015567 2520 1.708 - - - - - 0.851 0.857 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
59. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.707 - - - - - 0.796 0.911 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
60. eno2 ENSDARG00000014287 2162 1.707 - - - - - 0.754 0.953 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
61. notch1b ENSDARG00000052094 7874 1.703 - - - - - 0.855 0.848 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
62. stmn1b ENSDARG00000033655 9491 1.702 - - - - - 0.818 0.884 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
63. DTX4 ENSDARG00000076302 2642 1.702 - - - - - 0.741 0.961 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
64. nkx6.1 ENSDARG00000022569 3779 1.701 0.746 - - - - - 0.955 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
65. dacha ENSDARG00000010132 648 1.698 - - - - - 0.782 0.916 - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
66. st8sia5 ENSDARG00000036584 529 1.698 - - - - - 0.790 0.908 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
67. si:ch73-21g5.7 ENSDARG00000093156 9412 1.696 - - - - - 0.798 0.898 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
68. syn2a ENSDARG00000045945 434 1.696 - - - - - 0.813 0.883 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
69. pcsk1nl ENSDARG00000076170 1232 1.695 - - - - - 0.790 0.905 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
70. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.695 - - - - - 0.850 0.845 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
71. mir124-2 196 1.695 0.868 - - - - - 0.827 - - microRNA 124-2
72. CR388231.1 ENSDARG00000098710 153 1.695 - - - - - 0.818 0.877 - -
73. unc119b ENSDARG00000044362 1528 1.694 - - - 0.729 - - 0.965 - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
74. PPFIA3 ENSDARG00000077053 310 1.693 - - - - - 0.773 0.920 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
75. cers6 ENSDARG00000053583 247 1.692 - - - - - 0.767 0.925 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
76. slc25a6 ENSDARG00000005853, ENSDARG00000113366 99 1.691 - - - - - 0.799 0.892 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
77. glra1 ENSDARG00000012019 315 1.691 - - - - - 0.752 0.939 - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
78. BX511121.1 ENSDARG00000029997 1774 1.682 0.723 - - - - - 0.959 - -
79. cacng8a ENSDARG00000020450 32 1.681 - - - - - 0.752 0.929 - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
80. crb1 ENSDARG00000100506, ENSDARG00000110621 373 1.681 0.737 - - - - - 0.944 - - crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
81. RASGRF2 RASGRF2 644 1.68 - - - - - 0.842 0.838 - -
82. sorbs2a ENSDARG00000003046 242 1.678 0.707 - - 0.971 - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
83. C2CD4A ENSDARG00000061416 61 1.677 0.808 - - - - - 0.869 - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
84. sez6l2 ENSDARG00000076052 360 1.677 - - - - - 0.826 0.851 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
85. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.677 - - - - - 0.784 0.893 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
86. gpr144 gpr144 479 1.675 - - - - - 0.745 0.930 - -
87. CU856359.2 CU856359.2 182 1.675 - - - - - 0.733 0.942 - -
88. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.674 - - - - - 0.838 0.836 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
89. plp1a ENSDARG00000103732 3544 1.673 - - - - - 0.747 0.926 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
90. st8sia2 ENSDARG00000018788 2183 1.672 - - - - - 0.732 0.940 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
91. kcnn1a ENSDARG00000091306 95 1.669 - - - - - 0.714 0.955 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
92. dlg4 88 1.661 0.736 - - - - - 0.925 - - discs large MAGUK scaffold protein 4, transcript variant X5
93. aldocb ENSDARG00000019702 2111 1.661 - - - - - 0.756 0.905 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
94. TUBB8P7_1 TUBB8P7_1 2722 1.661 - - - - - 0.756 0.905 - -
95. stxbp1a ENSDARG00000001994 5154 1.66 - - - - - 0.795 0.865 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
96. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.66 - - - - - 0.769 0.891 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
97. nrarpb ENSDARG00000018958 6225 1.66 - - - - - 0.739 0.921 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
98. nmnat2 ENSDARG00000004580 370 1.658 - - - - - 0.752 0.906 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
99. rap2ip rap2ip 681 1.658 - - - - - 0.720 0.938 - -
100. mapk12b ENSDARG00000006409 2246 1.658 - - - - - 0.781 0.877 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]

There are 2137 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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