Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHC1

Gene Name Gene ID Reads Annotation
SHC1 ENSGALG00000039775 219 SHC adaptor protein 1 [Source:NCBI gene;Acc:395934]











Genes with expression patterns similar to SHC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHC1 ENSGALG00000039775 219 6 - 1.000 1.000 - 1.000 1.000 1.000 - - 1.000 SHC adaptor protein 1 [Source:NCBI gene;Acc:395934]
2. ADAMTS10 ENSGALG00000033157 243 1.541 - - - - - 0.806 0.735 - - - ADAM metallopeptidase with thrombospondin type 1 motif 10 [Source:HGNC Symbol;Acc:HGNC:13201]
3. COL8A2 ENSGALG00000002298 27 1.476 - - - - 0.773 0.703 - - - - collagen type VIII alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2216]
4. PAX2 ENSGALG00000005689 351 0.912 - - - - 0.912 - - - - - paired box 2 [Source:NCBI gene;Acc:395574]
5. HOXD8 ENSGALG00000037272 4338 0.889 - - - - 0.889 - - - - - homeobox D8 [Source:NCBI gene;Acc:396301]
6. GPATCH3 ENSGALG00000000881 113 0.882 - - - - - - 0.882 - - - G-patch domain containing 3 [Source:NCBI gene;Acc:419577]
7. VLDL VLDL 13 0.875 - - - - 0.875 - - - - -
8. MILR1 ENSGALG00000046212 7 0.875 - - - - 0.875 - - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
9. SNX21 ENSGALG00000006836 5 0.875 - - - - 0.875 - - - - - sorting nexin family member 21 [Source:HGNC Symbol;Acc:HGNC:16154]
10. TECPR1 ENSGALG00000003507 20 0.875 - - - - 0.875 - - - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
11. HOXA9 ENSGALG00000028983 9298 0.875 - - - - 0.875 - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
12. SLC22A7 ENSGALG00000001661 9 0.875 - - - - 0.875 - - - - - solute carrier family 22 member 7 [Source:NCBI gene;Acc:416712]
13. C2orf50 ENSGALG00000046449 17 0.875 - - - - 0.875 - - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
14. TAB3 ENSGALG00000016284 40 0.875 - - - - 0.875 - - - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
15. SIX4 ENSGALG00000017389 10 0.875 - - - - 0.875 - - - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
16. MYLK3 ENSGALG00000004334 13 0.875 - - - - 0.875 - - - - - myosin light chain kinase 3 [Source:HGNC Symbol;Acc:HGNC:29826]
17. TMEM132D ENSGALG00000002671 12 0.875 - - - - 0.875 - - - - - transmembrane protein 132D, transcript variant X6
18. RC3H2 ENSGALG00000001253 18 0.875 - - - - 0.875 - - - - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
19. KIAA1919 KIAA1919 58 0.872 - - - - - 0.872 - - - -
20. FAM208B 24 0.871 - - - - - 0.871 - - - - family with sequence similarity 208 member B, transcript variant X3
21. PPIP5K1 ENSGALG00000008385 7 0.871 - - - - - 0.871 - - - - diphosphoinositol pentakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:29023]
22. ENSGALG00000023485 ENSGALG00000023485 46 0.871 - - - - - 0.871 - - - -
23. PPM1L ENSGALG00000009537 5 0.871 - - - - - 0.871 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1L [Source:HGNC Symbol;Acc:HGNC:16381]
24. ALDH6A1 ENSGALG00000010211 29 0.871 - - - - - 0.871 - - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
25. KCNE3 ENSGALG00000022696 561 0.871 - - - - - 0.871 - - - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
26. ATP6V1AL ENSGALG00000000048 21 0.871 - - - - - 0.871 - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
27. DPP10 ENSGALG00000012156 20 0.871 - - - - - 0.871 - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
28. PVALB1 PVALB1 267 0.871 - - - - - 0.871 - - - -
29. LY96 ENSGALG00000032701 18 0.871 - - - - - 0.871 - - - - lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
30. AGO1 ENSGALG00000002249 125 0.871 - - - - - 0.871 - - - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
31. LRRC58 ENSGALG00000033186 15 0.869 - - - - - 0.869 - - - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
32. C3AR1 ENSGALG00000013218 32 0.867 - - - - - 0.867 - - - - complement C3a receptor 1 [Source:NCBI gene;Acc:418198]
33. DNAH12 ENSGALG00000005601 80 0.866 - - - - - 0.866 - - - - dynein, axonemal, heavy chain 12, transcript variant X6
34. ENSGALG00000022155 ENSGALG00000022155 80 0.865 - - - - 0.865 - - - - -
35. C9orf91 C9orf91 629 0.864 - - - - - 0.864 - - - -
36. EIF4ENIF1 ENSGALG00000006898 24 0.863 - - - - - 0.863 - - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
37. EVA1CL ENSGALG00000004734 168 0.862 - - - - - 0.862 - - - - protein eva-1 homolog C-like, transcript variant X2
38. CASR ENSGALG00000038405 53 0.861 - - - - - 0.861 - - - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
39. ENSGALG00000013318 ENSGALG00000013318 8 0.861 - - - - 0.861 - - - - -
40. TAPBPL ENSGALG00000014428 39 0.86 - - - - 0.860 - - - - - TAP binding protein like [Source:NCBI gene;Acc:426340]
41. KIAA1239 KIAA1239 263 0.859 - - - - - 0.859 - - - -
42. GINS3 ENSGALG00000031209 32 0.855 - - - - - 0.855 - - - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
43. K123 ENSGALG00000041978 16 0.853 - - - - 0.853 - - - - - K123 protein [Source:NCBI gene;Acc:395873]
44. C16orf72 ENSGALG00000007291 228 0.85 - - - - - 0.850 - - - - chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]
45. SLC25A26 ENSGALG00000007467 255 0.846 - - - - - 0.846 - - - - solute carrier family 25 member 26 [Source:NCBI gene;Acc:416084]
46. MCF2L2 ENSGALG00000008744 8 0.843 - - - - - 0.843 - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
47. PCDH12 ENSGALG00000002544 36 0.839 - - - - - 0.839 - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
48. ST3GAL5 ENSGALG00000033260 19 0.837 - - - - 0.837 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:NCBI gene;Acc:407775]
49. uc_6 uc_6 14 0.837 - - - - - 0.837 - - - -
50. ETS2 ENSGALG00000016059 271 0.833 - - - - 0.833 - - - - - ETS proto-oncogene 2, transcription factor [Source:NCBI gene;Acc:396250]
51. TMEM156 ENSGALG00000024490 9 0.833 - - - - 0.833 - - - - - transmembrane protein 156, transcript variant X5
52. ENSGALG00000028328 ENSGALG00000028328 23 0.831 - - - - 0.831 - - - - -
53. GAL10 GAL10 33355 0.83 - - - - 0.830 - - - - -
54. HECW1 ENSGALG00000037193 24 0.828 - - - - 0.828 - - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:22195]
55. LINS LINS 18 0.827 - - - - - 0.827 - - - -
56. HOXA3 ENSGALG00000027925 4287 0.824 - - - - - 0.824 - - - - homeobox A3 [Source:HGNC Symbol;Acc:HGNC:5104]
57. ENSGALG00000000346 ENSGALG00000000346 130 0.823 - - - - 0.823 - - - - -
58. TUBGCP5 ENSGALG00000016735 279 0.822 - - - - - - 0.822 - - - tubulin gamma complex associated protein 5 [Source:HGNC Symbol;Acc:HGNC:18600]
59. TMEM52B ENSGALG00000034698 169 0.82 - - - - 0.820 - - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
60. KIF13A ENSGALG00000012689 119 0.817 - - - - - 0.817 - - - - kinesin family member 13A [Source:HGNC Symbol;Acc:HGNC:14566]
61. DAPK1 ENSGALG00000012608 17 0.817 - - - - 0.817 - - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
62. FMN1 ENSGALG00000009723 100 0.816 - - - - - 0.816 - - - - formin 1 [Source:NCBI gene;Acc:386747]
63. C9orf3 C9orf3 47 0.815 - - - - 0.815 - - - - -
64. MRC1 ENSGALG00000008629 259 0.814 - - - - - 0.814 - - - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
65. ENSGALG00000010054 ENSGALG00000010054 81 0.813 - - - - 0.813 - - - - -
66. ZFPM1 ENSGALG00000006099 97 0.811 - - - - - 0.811 - - - - zinc finger protein, FOG family member 1 [Source:HGNC Symbol;Acc:HGNC:19762]
67. EOMES ENSGALG00000027247 27 0.81 - - - - - 0.810 - - - - Gallus gallus eomesodermin (EOMES), mRNA. [Source:RefSeq mRNA;Acc:NM_001321555]
68. TSPAN8 ENSGALG00000010152 2666 0.809 - - - - 0.809 - - - - - tetraspanin 8 [Source:NCBI gene;Acc:417854]
69. ANKRD12 ENSGALG00000008399 1724 0.809 - - - - - 0.809 - - - - ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:29135]
70. AEBP2 ENSGALG00000038026 133 0.807 - - - - 0.807 - - - - - AE binding protein 2 [Source:HGNC Symbol;Acc:HGNC:24051]
71. CACNA1S 63 0.807 - - - - - 0.807 - - - - calcium voltage-gated channel subunit alpha1 S, transcript variant X4
72. RHOV ENSGALG00000028047 75 0.806 - - - - - 0.806 - - - - ras homolog family member V [Source:HGNC Symbol;Acc:HGNC:18313]
73. ENSGALG00000014946 ENSGALG00000014946 40 0.804 - - - - - 0.804 - - - -
74. MADCAM1 ENSGALG00000028341 6 0.801 - - - - - 0.801 - - - - mucosal vascular addressin cell adhesion molecule 1
75. MKL2 186 0.8 - - - - - 0.800 - - - - MKL1/myocardin like 2, transcript variant X4
76. ENSGALG00000025953 ENSGALG00000025953 65 0.799 - - - - - 0.799 - - - -
77. PRPS2 ENSGALG00000016592 165 0.794 - - - - 0.794 - - - - - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
78. TRPC4 ENSGALG00000017044 300 0.792 - - - - - 0.792 - - - - transient receptor potential cation channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:12336]
79. PHF21A ENSGALG00000008403 3090 0.792 - - - - - 0.792 - - - - PHD finger protein 21A [Source:NCBI gene;Acc:423199]
80. RYR3 ENSGALG00000009705 30 0.791 - - - - - 0.791 - - - - ryanodine receptor 3 [Source:NCBI gene;Acc:396111]
81. IL2RB ENSGALG00000012472 7 0.791 - - - - - 0.791 - - - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
82. MIS18A ENSGALG00000015884 25 0.788 - - - - - 0.788 - - - - MIS18 kinetochore protein A [Source:HGNC Symbol;Acc:HGNC:1286]
83. NCX3 NCX3 16 0.788 - - - - 0.788 - - - - -
84. ENSGALG00000021517 ENSGALG00000021517 7 0.787 - - - - 0.787 - - - - -
85. Mar-02 Mar-02 7 0.78 - - - - - 0.780 - - - -
86. SRM ENSGALG00000003039 8331 0.778 - - - - - 0.778 - - - - spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
87. ZNF346 ENSGALG00000001144 96 0.778 - - - - - 0.778 - - - - zinc finger protein 346 [Source:HGNC Symbol;Acc:HGNC:16403]
88. CARD11 ENSGALG00000004398 58 0.777 - - - - - 0.777 - - - - caspase recruitment domain family member 11 [Source:NCBI gene;Acc:416476]
89. ENSGALG00000006296 ENSGALG00000006296 625 0.776 - - - - - 0.776 - - - -
90. N6AMT2 N6AMT2 4703 0.776 - - - - - 0.776 - - - -
91. ARHGAP6 ENSGALG00000016602 1098 0.773 - - - - - 0.773 - - - - Rho GTPase activating protein 6 [Source:HGNC Symbol;Acc:HGNC:676]
92. PALB2 ENSGALG00000006078 1549 0.769 - - - - - 0.769 - - - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
93. PPP1R36 ENSGALG00000040026 24 0.768 - - - - 0.768 - - - - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
94. PEAK1 ENSGALG00000002759 39 0.767 - - - - - 0.767 - - - - pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
95. HNMT ENSGALG00000012377 227 0.765 - - - - - 0.765 - - - - histamine N-methyltransferase [Source:NCBI gene;Acc:424298]
96. ASTL ENSGALG00000037220 2775 0.765 - - - - 0.765 - - - - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
97. ZC3H12C ENSGALG00000017154 59 0.765 - - - - - 0.765 - - - - zinc finger CCCH-type containing 12C [Source:HGNC Symbol;Acc:HGNC:29362]
98. HMBOX1 ENSGALG00000016633 247 0.764 - - - - - 0.764 - - - - homeobox containing 1 [Source:NCBI gene;Acc:422024]
99. ZFYVE28 15 0.764 - - - - - 0.764 - - - - zinc finger FYVE-type containing 28, transcript variant X3
100. RPS6KA5 ENSGALG00000030580 218 0.761 - - - - - - 0.761 - - - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]

There are 83 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA