Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHB

Gene Name Gene ID Reads Annotation
SHB ENSGALG00000026811 1194 SH2 domain containing adaptor protein B











Genes with expression patterns similar to SHB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHB ENSGALG00000026811 1194 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SH2 domain containing adaptor protein B
2. SELO SELO 711 1.507 - - - - - 0.771 - 0.736 - -
3. SLC30A10 ENSGALG00000026727 669 1.448 - - - - - 0.729 - 0.719 - - solute carrier family 30 member 10 [Source:HGNC Symbol;Acc:HGNC:25355]
4. ETAA1 ENSGALG00000027922 1684 0.885 - - - - - 0.885 - - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
5. MAP3K8 ENSGALG00000007356 188 0.876 - - - - - 0.876 - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
6. TGIF2 ENSGALG00000024081 21 0.875 - - - - - 0.875 - - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
7. LUZP2 ENSGALG00000030151 585 0.874 - - - - - 0.874 - - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
8. SLC51A ENSGALG00000007478 6 0.87 - - - - - 0.870 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
9. CPSF4L ENSGALG00000004441 4 0.87 - - - - - 0.870 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
10. LOC396365 ENSGALG00000027219 7 0.87 - - - - - 0.870 - - - - preprogastrin
11. HSD11B1b ENSGALG00000001369 1 0.87 - - - - - 0.870 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
12. ENSGALG00000016499 ENSGALG00000016499 4 0.87 - - - - - 0.870 - - - -
13. TMEM56 ENSGALG00000005580 10 0.87 - - - - - 0.870 - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
14. C1QTNF4 ENSGALG00000008080 3 0.87 - - - - - 0.870 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
15. CHRNB3 ENSGALG00000015384 9 0.87 - - - - - 0.870 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
16. MRAP2 ENSGALG00000015838 7 0.87 - - - - - 0.870 - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
17. ENSGALG00000008309 ENSGALG00000008309 7 0.87 - - - - - 0.870 - - - -
18. LCT ENSGALG00000012260 21 0.87 - - - - - 0.870 - - - - lactase [Source:NCBI gene;Acc:424294]
19. REM1 ENSGALG00000045602 4 0.87 - - - - - 0.870 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
20. ASB15 ENSGALG00000008814 7 0.87 - - - - - 0.870 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
21. C15orf60 C15orf60 16 0.87 - - - - - 0.870 - - - -
22. TRPV6 ENSGALG00000014746 3 0.87 - - - - - 0.870 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
23. C14orf159 C14orf159 7 0.853 - - - - - 0.853 - - - -
24. IL1RAP ENSGALG00000007253 6 0.851 - - - - - 0.851 - - - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
25. ENSGALG00000010218 ENSGALG00000010218 12 0.851 - - - - - 0.851 - - - -
26. IKBIP ENSGALG00000026284 31 0.849 - - - - - 0.849 - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
27. ENSGALG00000027143 ENSGALG00000027143 23 0.848 - - - - - 0.848 - - - -
28. CD200R1A CD200R1A 105 0.846 - - - - - 0.846 - - - -
29. SGK196 SGK196 83 0.845 - - - - - 0.845 - - - -
30. PPARG ENSGALG00000004974 62 0.843 - - - - - 0.843 - - - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
31. NIPAL3 ENSGALG00000004268 37 0.837 - - - - - 0.837 - - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
32. CHIC2 ENSGALG00000013931 21 0.837 - - - - - 0.837 - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
33. TDRD1 ENSGALG00000046180 612 0.836 - - - - - 0.836 - - - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
34. FIBCD1 ENSGALG00000003866 2 0.834 - - - - - 0.834 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
35. C20orf96 C20orf96 10 0.829 - - - - - 0.829 - - - -
36. ITGB2 ENSGALG00000007511 46 0.826 - - - - - 0.826 - - - - integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
37. GALNT16 ENSGALG00000009452 675 0.82 - - - - - - - - 0.820 - polypeptide N-acetylgalactosaminyltransferase 16 [Source:HGNC Symbol;Acc:HGNC:23233]
38. AKR1A1 ENSGALG00000010244 2220 0.819 - - - - - 0.819 - - - - aldo-keto reductase family 1 member A1 [Source:NCBI gene;Acc:424599]
39. KLHL22 ENSGALG00000006422 132 0.818 - - - - - 0.818 - - - - kelch like family member 22, transcript variant X2
40. CCNJL ENSGALG00000040152 4 0.816 - - - - - 0.816 - - - - cyclin J like [Source:HGNC Symbol;Acc:HGNC:25876]
41. GHR ENSGALG00000014855 131 0.816 - - - - - 0.816 - - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
42. KIAA2018 KIAA2018 67 0.812 - - - - - 0.812 - - - -
43. SUFU ENSGALG00000008096 307 0.8 - - - - - 0.800 - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
44. RUNX3 ENSGALG00000043372 43 0.8 - - - - - 0.800 - - - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
45. CASP7 ENSGALG00000008933 506 0.797 - - - - - 0.797 - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
46. UBE2E1 ENSGALG00000011286 5483 0.797 - - - - - 0.797 - - - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
47. ARF1 ENSGALG00000005393 364 0.794 - - - - - 0.794 - - - - ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
48. FAM65C 36 0.79 - - - - - 0.790 - - - - family with sequence similarity 65 member C, transcript variant X29
49. CA8 ENSGALG00000039145 109 0.79 - - - - - 0.790 - - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
50. S100A9 ENSGALG00000024272 103 0.789 - - - - - 0.789 - - - - S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
51. SCARB1 ENSGALG00000046226 428 0.788 - - - - - 0.788 - - - - scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
52. PCDH7 ENSGALG00000033883 6 0.787 - - - - - 0.787 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
53. CACNA2D3 ENSGALG00000005400 66 0.787 - - - - - 0.787 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 3 [Source:HGNC Symbol;Acc:HGNC:15460]
54. PLA2G10L ENSGALG00000019233 11 0.786 - - - - - 0.786 - - - - phospholipase A2 group X-like, transcript variant X2
55. SRD5A2 ENSGALG00000010625 23 0.786 - - - - - 0.786 - - - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
56. UNC93A ENSGALG00000011341 7 0.782 - - - - - 0.782 - - - - unc-93 homolog A [Source:HGNC Symbol;Acc:HGNC:12570]
57. KLHL4 ENSGALG00000006877 1121 0.781 - - - - - - - - 0.781 - kelch like family member 4 [Source:HGNC Symbol;Acc:HGNC:6355]
58. BNC2 ENSGALG00000015101 115 0.778 - - - - - 0.778 - - - - basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]
59. PSMD4 ENSGALG00000028505 16 0.778 - - - - - 0.778 - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
60. ARNTL ENSGALG00000005378 19 0.776 - - - - - 0.776 - - - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
61. C15orf26 C15orf26 21 0.775 - - - - - 0.775 - - - -
62. FASTKD1 ENSGALG00000009841 45 0.772 - - - - - 0.772 - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
63. THAP1 ENSGALG00000015385 15 0.771 - - - - - 0.771 - - - - THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
64. RFX3 ENSGALG00000010179 305 0.768 - - - - - 0.768 - - - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
65. ERCC4 ENSGALG00000002981 1178 0.764 - - - - - - - 0.764 - - Gallus gallus ERCC excision repair 4, endonuclease catalytic subunit (ERCC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318411]
66. F8 ENSGALG00000005077 56 0.761 - - - - - 0.761 - - - - coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]
67. TMEM11 ENSGALG00000004749 206 0.756 - - - - - 0.756 - - - - transmembrane protein 11 [Source:NCBI gene;Acc:427663]
68. SMAD3 ENSGALG00000035701 161 0.756 - - - - - 0.756 - - - - SMAD family member 3 [Source:NCBI gene;Acc:395132]
69. ZDHHC8 ENSGALG00000002124 35 0.754 - - - - - 0.754 - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
70. ENSGALG00000014291 ENSGALG00000014291 29 0.752 - - - - - 0.752 - - - -
71. RNF208 ENSGALG00000008911 141 0.747 - - - - - 0.747 - - - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
72. LRRC40 ENSGALG00000011301 3409 0.747 - - - - - 0.747 - - - - leucine rich repeat containing 40 [Source:NCBI gene;Acc:424713]
73. CCNL1 ENSGALG00000009699 1033 0.745 - - - - - - - 0.745 - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
74. ELL2 ENSGALG00000014678 1111 0.743 - - - - - - - 0.743 - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
75. MARVELD2 ENSGALG00000027140 828 0.741 - - - - - - - 0.741 - - MARVEL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26401]
76. AFAP1L1 ENSGALG00000039628 1522 0.739 - - - - - - - 0.739 - - actin filament associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:26714]
77. MAPK1 ENSGALG00000001501 34 0.739 - - - - - 0.739 - - - - mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
78. CENPN ENSGALG00000013494 341 0.736 - - - - - - - 0.736 - - centromere protein N [Source:NCBI gene;Acc:693246]
79. GNG13 ENSGALG00000005293, ENSGALG00000038594 73 0.733 - - - - - 0.733 - - - - G protein subunit gamma 13 [Source:NCBI gene;Acc:771014]
80. CEP290 ENSGALG00000011177 1559 0.731 - - - - - - - 0.731 - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
81. TMEM116 ENSGALG00000004760 217 0.731 - - - - - 0.731 - - - - transmembrane protein 116 [Source:HGNC Symbol;Acc:HGNC:25084]
82. GALK2 ENSGALG00000036201 1016 0.73 - - - - - 0.730 - - - - galactokinase 2 [Source:NCBI gene;Acc:415596]
83. ENSGALG00000006592 ENSGALG00000006592 83 0.73 - - - - - - - 0.730 - -
84. PLXDC2 ENSGALG00000007956 238 0.726 - - - - - 0.726 - - - - plexin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21013]
85. SLC38A6 ENSGALG00000011893 737 0.724 - - - - - - - 0.724 - - solute carrier family 38 member 6 [Source:HGNC Symbol;Acc:HGNC:19863]
86. PACSIN2 ENSGALG00000014159 601 0.724 - - - - - - - 0.724 - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
87. ENSGALG00000023084 ENSGALG00000023084 10 0.723 - - - - - 0.723 - - - -
88. IQUB ENSGALG00000008823 65 0.723 - - - - - 0.723 - - - - IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
89. ANKRD13C ENSGALG00000031210 2152 0.723 - - - - - - 0.723 - - - ankyrin repeat domain 13C [Source:HGNC Symbol;Acc:HGNC:25374]
90. C3H20ORF94 C3H20ORF94 414 0.723 - - - - - 0.723 - - - -
91. SNX25 ENSGALG00000010610 31 0.723 - - - - - 0.723 - - - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
92. STK10 ENSGALG00000002816 1194 0.721 - - - - - - - 0.721 - - serine/threonine kinase 10 [Source:NCBI gene;Acc:416204]
93. PKD2L2 ENSGALG00000006120 592 0.72 - - - - - 0.720 - - - - polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
94. CEP57 ENSGALG00000017201 524 0.719 - - - - - - - 0.719 - - centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
95. SETD1B ENSGALG00000004324 2897 0.719 - - - - - - - 0.719 - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
96. GALNT5 1027 0.718 - - - - - - - 0.718 - - polypeptide N-acetylgalactosaminyltransferase 5, transcript variant X1
97. TRMT12 ENSGALG00000006773 707 0.717 - - - - - 0.717 - - - - tRNA methyltransferase 12 homolog [Source:HGNC Symbol;Acc:HGNC:26091]
98. NUDT9 ENSGALG00000010932 1987 0.716 - - - - - - - 0.716 - - nudix hydrolase 9 [Source:HGNC Symbol;Acc:HGNC:8056]
99. NHLRC2 ENSGALG00000008946 387 0.711 - - - - - 0.711 - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
100. HEP21 ENSGALG00000000115 117 0.71 - - - - - 0.710 - - - - hen egg protein 21 kDa [Source:NCBI gene;Acc:395192]

There are 9 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA