Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHANK2-AS1

Gene Name Gene ID Reads Annotation
SHANK2-AS1 ENSG00000226627 88 SHANK2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40014]



Genes with expression patterns similar to SHANK2-AS1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SHANK2-AS1 ENSG00000226627 88 2 1.000 1.000 SHANK2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40014]
2. STXBP5-AS1 ENSG00000233452 28 0.917 - 0.917 STXBP5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44183]
3. LOC101927419 56 0.906 - 0.906 uncharacterized LOC101927419
4. LOC101927839 4 0.898 - 0.898 uncharacterized LOC101927839
5. LINC01070 ENSG00000260102, ENSG00000282647 4 0.898 - 0.898 long intergenic non-protein coding RNA 1070 [Source:HGNC Symbol;Acc:HGNC:49110]
6. LOC101929384 10 0.89 - 0.890 uncharacterized LOC101929384
7. CASC11 ENSG00000249375 8 0.889 - 0.889 cancer susceptibility 11 [Source:HGNC Symbol;Acc:HGNC:48939]
8. CLSTN2-AS1 ENSG00000250433 6 0.877 - 0.877 CLSTN2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49095]
9. MS4A12 ENSG00000071203 5 0.876 - 0.876 membrane spanning 4-domains A12 [Source:HGNC Symbol;Acc:HGNC:13370]
10. LDHC ENSG00000166796 11 0.873 - 0.873 lactate dehydrogenase C [Source:HGNC Symbol;Acc:HGNC:6544]
11. LOC100289580 12 0.869 - 0.869 uncharacterized LOC100289580
12. LINC00639 ENSG00000259070 8 0.864 - 0.864 long intergenic non-protein coding RNA 639 [Source:HGNC Symbol;Acc:HGNC:27502]
13. TEX19 ENSG00000182459 13 0.862 - 0.862 testis expressed 19 [Source:HGNC Symbol;Acc:HGNC:33802]
14. CD300LG ENSG00000161649 103 0.861 - 0.861 CD300 molecule like family member g [Source:HGNC Symbol;Acc:HGNC:30455]
15. LOC100147773 8 0.858 - 0.858 uncharacterized LOC100147773
16. RBM14-RBM4 ENSG00000248643 8 0.856 - 0.856 RBM14-RBM4 readthrough [Source:HGNC Symbol;Acc:HGNC:38840]
17. TRPV6 ENSG00000165125, ENSG00000276971 10 0.853 - 0.853 transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
18. FAM196B 11 0.849 - 0.849 family with sequence similarity 196 member B, transcript variant X2
19. NBPF8 ENSG00000270231 18 0.812 - 0.812 NBPF member 8 [Source:HGNC Symbol;Acc:HGNC:31990]
20. ZNF497 ENSG00000174586 90 0.81 - 0.810 zinc finger protein 497 [Source:HGNC Symbol;Acc:HGNC:23714]
21. HSPB3 ENSG00000169271 30 0.809 - 0.809 heat shock protein family B (small) member 3 [Source:HGNC Symbol;Acc:HGNC:5248]
22. PI15 ENSG00000137558 20 0.802 - 0.802 peptidase inhibitor 15 [Source:HGNC Symbol;Acc:HGNC:8946]
23. LOC341056 20 0.795 - 0.795 SUMO1 activating enzyme subunit 1 pseudogene
24. LOC643355 14 0.792 - 0.792 uncharacterized LOC643355, transcript variant X1
25. CCDC42B CCDC42B 9 0.787 - 0.787
26. T1560 T1560 21 0.787 - 0.787
27. ANXA2R ENSG00000177721 34 0.78 - 0.780 annexin A2 receptor [Source:HGNC Symbol;Acc:HGNC:33463]
28. SLC12A8 ENSG00000221955 79 0.779 - 0.779 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
29. KRT42P ENSG00000214514 25 0.775 - 0.775 keratin 42 pseudogene [Source:HGNC Symbol;Acc:HGNC:27581]
30. GOLGA6L6 ENSG00000277322 45 0.771 - 0.771 golgin A6 family-like 6 [Source:HGNC Symbol;Acc:HGNC:37225]
31. MCEE ENSG00000124370 105 0.766 - 0.766 methylmalonyl-CoA epimerase [Source:HGNC Symbol;Acc:HGNC:16732]
32. TMIGD3 ENSG00000121933 54 0.762 - 0.762 transmembrane and immunoglobulin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:51375]
33. ATP10A ENSG00000206190 53 0.762 - 0.762 ATPase phospholipid transporting 10A (putative) [Source:HGNC Symbol;Acc:HGNC:13542]
34. LINC01220 ENSG00000259687 10 0.749 - 0.749 long intergenic non-protein coding RNA 1220 [Source:HGNC Symbol;Acc:HGNC:49664]
35. LINC01372 24 0.746 - 0.746 long intergenic non-protein coding RNA 1372
36. MTRNR2L5 ENSG00000249860 80 0.745 - 0.745 MT-RNR2 like 5 [Source:HGNC Symbol;Acc:HGNC:37162]
37. FANK1 ENSG00000203780 114 0.738 - 0.738 fibronectin type III and ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:HGNC:23527]
38. RHOV ENSG00000104140 20 0.733 - 0.733 ras homolog family member V [Source:HGNC Symbol;Acc:HGNC:18313]
39. TPTE2 ENSG00000132958 37 0.732 - 0.732 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 [Source:HGNC Symbol;Acc:HGNC:17299]
40. C2orf88 ENSG00000187699 121 0.729 - 0.729 chromosome 2 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:28191]
41. C20orf85 ENSG00000124237 11 0.715 - 0.715 chromosome 20 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:16216]
42. TOP1P1 22 0.714 - 0.714 topoisomerase (DNA) I pseudogene 1
43. TMEM154 ENSG00000170006 22 0.706 - 0.706 transmembrane protein 154 [Source:HGNC Symbol;Acc:HGNC:26489]
44. PRSS36 ENSG00000178226 33 0.704 - 0.704 serine protease 36 [Source:HGNC Symbol;Acc:HGNC:26906]
45. ASPHD1 ENSG00000174939 87 0.7 - 0.700 aspartate beta-hydroxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27380]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA