Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SHANK2

Gene Name Gene ID Reads Annotation
SHANK2 ENSGALG00000035916 9 SH3 and multiple ankyrin repeat domains 2, transcript variant X10











Genes with expression patterns similar to SHANK2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SHANK2 ENSGALG00000035916 9 4 - - 1.000 1.000 - 1.000 - - - 1.000 SH3 and multiple ankyrin repeat domains 2, transcript variant X10
2. PIGH ENSGALG00000009510 13 1.455 - - - 0.710 - 0.745 - - - - phosphatidylinositol glycan anchor biosynthesis class H [Source:NCBI gene;Acc:423271]
3. BAP1 ENSGALG00000004366 12 1 - - - - - 1.000 - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
4. SLC38A7 ENSGALG00000002313 25 1 - - - - - 1.000 - - - - solute carrier family 38 member 7, transcript variant X5
5. DPF3 ENSGALG00000009352 7 1 - - - - - 1.000 - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
6. ANKFN1 ENSGALG00000003105 15 1 - - - - - 1.000 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
7. RAB4A ENSGALG00000036218 20 1 - - - - - 1.000 - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
8. ENSGALG00000025912 ENSGALG00000025912 4 1 - - - - - 1.000 - - - -
9. ITGAV ENSGALG00000002655 26 1 - - - - - 1.000 - - - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
10. CREB3 ENSGALG00000002523 23 1 - - - - - 1.000 - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
11. VTG1 ENSGALG00000039354 17 1 - - - - - 1.000 - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
12. ABI3BP ENSGALG00000015307 4 1 - - - - - 1.000 - - - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
13. PEX26 ENSGALG00000019286 1 1 - - - - - 1.000 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]
14. TMEM201 ENSGALG00000002527 2 1 - - - - - 1.000 - - - - transmembrane protein 201
15. BCMO1 BCMO1 35 1 - - - - - 1.000 - - - -
16. ENSGALG00000006495 ENSGALG00000006495 4 1 - - - - - 1.000 - - - -
17. OLIG3 ENSGALG00000013862 51 1 - - - - - 1.000 - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
18. KCNQ3 ENSGALG00000037626 6 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
19. ENSGALG00000020320 ENSGALG00000020320 1 1 - - - - - 1.000 - - - -
20. TMEM181 ENSGALG00000013737 19 1 - - - - - 1.000 - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
21. SMIM10 SMIM10 2 1 - - - - - 1.000 - - - -
22. ENSGALG00000024369 ENSGALG00000024369 4 1 - - - - - 1.000 - - - -
23. ACPP ENSGALG00000043415 4 1 - - - - - 1.000 - - - - acid phosphatase, prostate, transcript variant X2
24. TRAF1 ENSGALG00000001583 3 1 - - - - - 1.000 - - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
25. SRPX2 ENSGALG00000006796 32 1 - - - - - 1.000 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
26. INHBB ENSGALG00000028770 2 1 - - - - - 1.000 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
27. CLDN19 ENSGALG00000023580 1 1 - - - - - 1.000 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
28. ENSGALG00000020772 ENSGALG00000020772 6 1 - - 1.000 - - - - - - -
29. WNT3 ENSGALG00000001079 8 1 - - - - - 1.000 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
30. VWA3B ENSGALG00000040709 5 1 - - - - - 1.000 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
31. Sep-03 Sep-03 109 0.995 - - - - - 0.995 - - - -
32. NOD1 ENSGALG00000036807 10 0.991 - - - 0.991 - - - - - - Gallus gallus nucleotide binding oligomerization domain containing 1 (NOD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318438]
33. ANKS1A ENSGALG00000002723 3 0.991 - - - 0.991 - - - - - - ankyrin repeat and sterile alpha motif domain containing 1A [Source:HGNC Symbol;Acc:HGNC:20961]
34. TMEM132D ENSGALG00000002671 12 0.991 - - - 0.991 - - - - - - transmembrane protein 132D, transcript variant X6
35. ENSGALG00000022373 ENSGALG00000022373 2 0.991 - - - 0.991 - - - - - -
36. FOXN1 ENSGALG00000043868 3 0.991 - - - 0.991 - - - - - - forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]
37. CHRDL2 ENSGALG00000017308 2 0.991 - - - 0.991 - - - - - - chordin like 2 [Source:HGNC Symbol;Acc:HGNC:24168]
38. MESP2 ENSGALG00000008275 2 0.991 - - - 0.991 - - - - - - mesoderm posterior bHLH transcription factor 2
39. ENSGALG00000014037 ENSGALG00000014037 3 0.991 - - - 0.991 - - - - - -
40. SCG5 ENSGALG00000009725 10 0.981 - - - - - 0.981 - - - - secretogranin V [Source:NCBI gene;Acc:769742]
41. MAPK10 ENSGALG00000011109 16 0.978 - - - - - 0.978 - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
42. CSGALNACT1 ENSGALG00000010125 5 0.976 - - - 0.976 - - - - - - chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24290]
43. SNORA74 SNORA74 8 0.971 - - - - - 0.971 - - - -
44. UNCX ENSGALG00000039292 165 0.971 - - - - - 0.971 - - - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
45. STYK1 ENSGALG00000014759 3 0.971 - - - - - 0.971 - - - - serine/threonine/tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:18889]
46. FHAD1 ENSGALG00000034761 3 0.97 - - - - - 0.970 - - - - forkhead associated phosphopeptide binding domain 1 [Source:HGNC Symbol;Acc:HGNC:29408]
47. A4GNT ENSGALG00000006600 11 0.962 - - - 0.962 - - - - - - alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
48. RBM15 ENSGALG00000000401 22 0.956 - - - 0.956 - - - - - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
49. PCDH8 ENSGALG00000036258 1945 0.953 - - - - - 0.953 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
50. ITGA6 ENSGALG00000034007 53 0.952 - - - - - 0.952 - - - - integrin subunit alpha 6 [Source:NCBI gene;Acc:396226]
51. CCDC6 ENSGALG00000003165 93 0.951 - - - - - 0.951 - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
52. ENSGALG00000026584 ENSGALG00000026584 77 0.945 - - - - - 0.945 - - - -
53. PSEN1 ENSGALG00000009320 15 0.942 - - - - - 0.942 - - - - presenilin 1 [Source:NCBI gene;Acc:373977]
54. ENSGALG00000006897 ENSGALG00000006897 13 0.941 - - - - - - - - - 0.941
55. PLCH2 ENSGALG00000001207 7 0.932 - - - - - 0.932 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
56. MAK ENSGALG00000012770 32 0.932 - - - - - 0.932 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
57. TCTE1 ENSGALG00000010165 65 0.93 - - - - - 0.930 - - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
58. SPATA1 ENSGALG00000008784 4 0.927 - - 0.927 - - - - - - - spermatogenesis associated 1 [Source:HGNC Symbol;Acc:HGNC:14682]
59. PDE3A ENSGALG00000013143 28 0.925 - - - 0.925 - - - - - - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
60. DCLRE1B ENSGALG00000028626 48 0.919 - - - - - 0.919 - - - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
61. DACH2 ENSGALG00000006886 426 0.919 - - - - - 0.919 - - - - dachshund family transcription factor 2 [Source:NCBI gene;Acc:395576]
62. FAM81A ENSGALG00000004103 8 0.913 - - - - - 0.913 - - - - family with sequence similarity 81 member A [Source:HGNC Symbol;Acc:HGNC:28379]
63. LRRC1 ENSGALG00000016304 21 0.907 - - - - - 0.907 - - - - leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
64. SDR42E2 ENSGALG00000006964 57 0.898 - - - - - 0.898 - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
65. ATP6V0E1 10 0.897 - - - 0.897 - - - - - - ATPase H+ transporting V0 subunit e1
66. OXR1 44 0.896 - - - - - 0.896 - - - - oxidation resistance 1, transcript variant X7
67. MSX2 ENSGALG00000038848 6950 0.895 - - - - - 0.895 - - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
68. APOLD1 ENSGALG00000011784 1 0.888 - - 0.888 - - - - - - - apolipoprotein L domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25268]
69. TMCC3 ENSGALG00000011320 1 0.888 - - 0.888 - - - - - - - transmembrane and coiled-coil domain family 3, transcript variant X1
70. DCDC2B ENSGALG00000046649 3 0.888 - - 0.888 - - - - - - - doublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576]
71. CCDC67 CCDC67 3 0.888 - - 0.888 - - - - - - -
72. LAMP3 ENSGALG00000008759 2 0.888 - - 0.888 - - - - - - - lysosomal associated membrane protein 3 [Source:NCBI gene;Acc:424961]
73. NIPAL1 ENSGALG00000027986 11 0.888 - - 0.888 - - - - - - - NIPA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27194]
74. ENSGALG00000023027 ENSGALG00000023027 5 0.888 - - 0.888 - - - - - - -
75. FGG ENSGALG00000009268 418 0.888 - - 0.888 - - - - - - - fibrinogen gamma chain [Source:NCBI gene;Acc:395837]
76. GRK6 ENSGALG00000014054 6 0.888 - - 0.888 - - - - - - - G protein-coupled receptor kinase 6 [Source:HGNC Symbol;Acc:HGNC:4545]
77. GDF10 ENSGALG00000005985 11 0.888 - - - - - 0.888 - - - - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
78. PSCA ENSGALG00000045875 5 0.888 - - 0.888 - - - - - - - prostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]
79. ZAP70 ENSGALG00000001486 2 0.888 - - 0.888 - - - - - - - Gallus gallus zeta-chain (TCR) associated protein kinase 70kDa (ZAP70), mRNA. [Source:RefSeq mRNA;Acc:NM_001321556]
80. F7 ENSGALG00000016833 4 0.888 - - 0.888 - - - - - - - coagulation factor VII [Source:NCBI gene;Acc:395086]
81. ACTL10 ACTL10 3 0.888 - - 0.888 - - - - - - -
82. BDKRB2 ENSGALG00000011080 12 0.888 - - 0.888 - - - - - - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
83. CLDN16 ENSGALG00000025821 14 0.888 - - 0.888 - - - - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
84. ENSGALG00000009237 ENSGALG00000009237 3 0.888 - - 0.888 - - - - - - -
85. HRG ENSGALG00000008646 1 0.888 - - 0.888 - - - - - - - histidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181]
86. ATP6V1AL ENSGALG00000000048 21 0.888 - - 0.888 - - - - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
87. WDR72 ENSGALG00000004545 5 0.888 - - 0.888 - - - - - - - WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
88. ENSGALG00000028156 ENSGALG00000028156 1 0.888 - - 0.888 - - - - - - -
89. A1CF ENSGALG00000003765 36 0.888 - - 0.888 - - - - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
90. ABCA4 ENSGALG00000005752 15 0.888 - - 0.888 - - - - - - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
91. ENSGALG00000023869 ENSGALG00000023869 1 0.888 - - 0.888 - - - - - - -
92. CHAT ENSGALG00000002289 26 0.888 - - 0.888 - - - - - - - choline O-acetyltransferase [Source:NCBI gene;Acc:395314]
93. OTOR ENSGALG00000008732 10 0.888 - - 0.888 - - - - - - - otoraplin [Source:NCBI gene;Acc:395484]
94. ST8SIA5 ENSGALG00000035927 4 0.888 - - 0.888 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:NCBI gene;Acc:414797]
95. ENSGALG00000023695 ENSGALG00000023695 2 0.888 - - 0.888 - - - - - - -
96. MLNR ENSGALG00000017003 10 0.885 - - - - - 0.885 - - - - motilin receptor [Source:NCBI gene;Acc:428072]
97. DNAJC6 ENSGALG00000011041 4 0.885 - - - - - 0.885 - - - - DnaJ heat shock protein family (Hsp40) member C6 [Source:NCBI gene;Acc:424698]
98. ENPP1 ENSGALG00000034397 278 0.878 - - 0.878 - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:3356]
99. ENSGALG00000028402 ENSGALG00000028402 5 0.875 - - 0.875 - - - - - - -
100. SLC7A9 ENSGALG00000021158 1737 0.874 - - 0.874 - - - - - - - solute carrier family 7 member 9 [Source:NCBI gene;Acc:415768]

There are 156 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA