Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SH3TC1

Gene Name Gene ID Reads Annotation
SH3TC1 ENSDARG00000077330 8 SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]










Genes with expression patterns similar to SH3TC1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3TC1 ENSDARG00000077330 8 4 - 1.000 1.000 1.000 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
2. si:ch211-202h22.9 ENSDARG00000079980 2 2 - 1.000 - - 1.000 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
3. ptchd4 ENSDARG00000008249 17 1.824 - 0.919 - - 0.905 - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
4. IKZF4 ENSDARG00000037068 36 1.569 - - 0.751 - 0.818 - - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
5. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1.557 - 0.824 - - 0.733 - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
6. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1.526 - - - 0.779 0.747 - - - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
7. CR556708.1 ENSDARG00000100565 6 1 - - - - 1.000 - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
8. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
9. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
10. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - 1.000 - - - -
11. btr27 btr27 0 1 - - - - 1.000 - - - -
12. si:dkey-88n24.8 ENSDARG00000091095 9 1 - 1.000 - - - - - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
13. col5a2b ENSDARG00000024847 17 1 - - - - 1.000 - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
14. zgc:101553 zgc:101553 1 1 - - - 1.000 - - - - -
15. fgf11b ENSDARG00000043907 16 1 - 1.000 - - - - - - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
16. dpyda dpyda 12 1 - - - - 1.000 - - - -
17. pcdh2g16 1 1 - - - - 1.000 - - - - protocadherin 2 gamma 16
18. si:dkey-45k15.1 ENSDARG00000061714 32 1 - 1.000 - - - - - - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
19. htr5a htr5a 4 1 - - - - 1.000 - - - -
20. tmem54 tmem54 3 1 - - - - 1.000 - - - -
21. rab11fip5a ENSDARG00000104179 5 1 - 1.000 - - - - - - - RAB11 family interacting protein 5a (class I) [Source:ZFIN;Acc:ZDB-GENE-090313-206]
22. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
23. CU695216.1 CU695216.1 0 1 - - - - 1.000 - - - -
24. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 - 1.000 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
25. CR749167.1 ENSDARG00000100165 38 1 - - - - 1.000 - - - -
26. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -
27. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
28. si:dkey-211g8.6 ENSDARG00000063088 19 1 - 1.000 - - - - - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
29. taar20t ENSDARG00000095035 1 1 - - - - 1.000 - - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
30. si:ch211-198e13.3 5 1 - - - - 1.000 - - - - si:ch211-198e13.3, transcript variant X1
31. nrg2b ENSDARG00000086585 100 1 - 1.000 - - - - - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
32. CU075911.1 CU075911.1 2 1 - - - 1.000 - - - - -
33. baiap2l1a ENSDARG00000029305 30 1 - 1.000 - - - - - - - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
34. TRIM8 TRIM8 5 1 - - - - 1.000 - - - -
35. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
36. si:dkey-206f10.5 si:dkey-206f10.5 1 1 - - - - 1.000 - - - -
37. trpm3 ENSDARG00000039181 2 1 - - - - 1.000 - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
38. mylkb ENSDARG00000004753 95 1 - 1.000 - - - - - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
39. clcf1 ENSDARG00000076140 5 1 - - - 1.000 - - - - - cardiotrophin-like cytokine factor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-244]
40. si:dkey-25o1.7 ENSDARG00000093570, ENSDARG00000100520, ENSDARG00000111049, ENSDARG00000112319 13 1 - - - 1.000 - - - - - si:dkey-25o1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-375]
41. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - 1.000 - - - -
42. si:ch211-149k23.4 si:ch211-149k23.4 0 1 - - - - 1.000 - - - -
43. CU326366.2 ENSDARG00000068593 11 1 - - - - 1.000 - - - -
44. U1_16 U1_16 0 1 - - - - 1.000 - - - -
45. olfcg5 ENSDARG00000102459 5 1 - - - - 1.000 - - - - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
46. PAQR8 ENSDARG00000088828 26 1 - 1.000 - - - - - - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
47. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
48. CR388160.3 CR388160.3 0 1 - - - - 1.000 - - - -
49. Telomerase-vert Telomerase-vert 8 1 - - - - 1.000 - - - -
50. ftr55 ENSDARG00000009161 3 1 - - - - 1.000 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
51. ENSDARG00000089165 ENSDARG00000089165 1 1 - - - 1.000 - - - - -
52. lacc1 ENSDARG00000076914 11 1 - 1.000 - - - - - - - laccase (multicopper oxidoreductase) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-155]
53. BX119910.9 BX119910.9 7 1 - - - - 1.000 - - - -
54. NUGGC NUGGC 9 1 - 1.000 - - - - - - -
55. rnh1 ENSDARG00000086631 14 1 - 1.000 - - - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
56. fam178a fam178a 29 1 - 1.000 - - - - - - -
57. CSF3 CSF3 4 1 - - - - 1.000 - - - -
58. cryba2a ENSDARG00000030349 1342 1 - 1.000 - - - - - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
59. si:dkeyp-73d8.12 si:dkeyp-73d8.12 0 1 - - - - 1.000 - - - -
60. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
61. ENSDARG00000089797 ENSDARG00000089797 50 1 - - - 1.000 - - - - -
62. CYP46A1 CYP46A1 16 1 - 1.000 - - - - - - -
63. cux2b ENSDARG00000086345 519 1 - 1.000 - - - - - - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
64. UNC119 UNC119 104 1 - - - - 1.000 - - - -
65. CU596012.1 CU596012.1 24 1 - 1.000 - - - - - - -
66. DGKG ENSDARG00000062696 1 1 - - - - 1.000 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
67. or109-1 ENSDARG00000105796 1 1 - - - 1.000 - - - - - odorant receptor, family D, subfamily 109, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-67]
68. KRT9 KRT9 7 1 - - - - 1.000 - - - -
69. wee1 ENSDARG00000093864, ENSDARG00000114333, ENSDARG00000115653 1 1 - - - - 1.000 - - - - WEE1 G2 checkpoint kinase [Source:ZFIN;Acc:ZDB-GENE-030131-5268]
70. TPMT TPMT 138 1 - 1.000 - - - - - - -
71. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - - - 1.000 - - - - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
72. CU929036.1 CU929036.1 7 1 - 1.000 - - - - - - -
73. BX294653.4 BX294653.4 1 1 - - - - 1.000 - - - -
74. CU633740.1 CU633740.1 8 1 - - - - 1.000 - - - -
75. MAP3K13 ENSDARG00000009493 8 1 - 1.000 - - - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
76. ptk2.2 ptk2.2 3 1 - - - - 1.000 - - - -
77. tmprss4b ENSDARG00000012860 6 1 - 1.000 - - - - - - - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
78. ccr6a ENSDARG00000087474 10 1 - - - - 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
79. dmrt1 ENSDARG00000007349 16 1 - - - 1.000 - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
80. prelp ENSDARG00000070597 99 1 - - - - 1.000 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
81. gabrr2b ENSDARG00000014057 9 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
82. zgc:171220 ENSDARG00000102959 164 1 - 1.000 - - - - - - - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
83. edn3b ENSDARG00000086669 8 1 - - - - 1.000 - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
84. zgc:171887 ENSDARG00000058791 0 1 - - - - 1.000 - - - - zgc:171887 [Source:ZFIN;Acc:ZDB-GENE-080220-39]
85. ssh1a ENSDARG00000056780 3 1 - - - - 1.000 - - - - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
86. si:dkeyp-35e5.5 ENSDARG00000104026 3 1 - - - - 1.000 - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
87. BX321875.4 ENSDARG00000114661 5 1 - 1.000 - - - - - - -
88. ttc25 ENSDARG00000058140 2 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
89. zgc:152891 ENSDARG00000016789 11 1 - 1.000 - - - - - - - zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
90. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - 1.000 - - - - - - -
91. Metazoa_SRP_17 Metazoa_SRP_17 1 1 - - - 1.000 - - - - -
92. si:ch211-149k23.10 si:ch211-149k23.10 10 1 - - - - 1.000 - - - -
93. ccdc24 ENSDARG00000038793 7 1 - - - - 1.000 - - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
94. si:dkey-152b24.6 ENSDARG00000105043 39 1 - - - 1.000 - - - - - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
95. CABZ01058422.1 CABZ01058422.1 0 1 - - - - 1.000 - - - -
96. CU929143.1 ENSDARG00000099967 1 1 - - - 1.000 - - - - -
97. SAMD9L SAMD9L 10 1 - - - 1.000 - - - - -
98. mybpc1 ENSDARG00000045560 26 1 - 1.000 - - - - - - - myosin binding protein C, slow type [Source:ZFIN;Acc:ZDB-GENE-041114-196]
99. CCDC96 ENSDARG00000035963 5 1 - - - - 1.000 - - - - coiled-coil domain containing 96 [Source:ZFIN;Acc:ZDB-GENE-081022-156]
100. CR936465.1 CR936465.1 7 1 - - - 1.000 - - - - -

There are 673 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA