Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SH3TC1

Gene Name Gene ID Reads Annotation
SH3TC1 ENSDARG00000077330 8 SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]










Genes with expression patterns similar to SH3TC1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3TC1 ENSDARG00000077330 8 4 - 1.000 1.000 1.000 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
2. si:ch211-202h22.9 ENSDARG00000079980 2 2 - 1.000 - - 1.000 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
3. ptchd4 ENSDARG00000008249 17 1.824 - 0.919 - - 0.905 - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
4. IKZF4 ENSDARG00000037068 36 1.569 - - 0.751 - 0.818 - - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
5. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1.557 - 0.824 - - 0.733 - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
6. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1.526 - - - 0.779 0.747 - - - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
7. zgc:173443 ENSDARG00000034403 26 1 - - - - 1.000 - - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
8. CR749167.1 ENSDARG00000100165 38 1 - - - - 1.000 - - - -
9. SNORD15 SNORD15 0 1 - - - - 1.000 - - - -
10. stpg1 ENSDARG00000103765 19 1 - 1.000 - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
11. GRM5 GRM5 4 1 - 1.000 - - - - - - -
12. si:dkeyp-35e5.5 ENSDARG00000104026 3 1 - - - - 1.000 - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
13. herc3 ENSDARG00000075887 41 1 - 1.000 - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
14. CR388160.3 CR388160.3 0 1 - - - - 1.000 - - - -
15. trim35-21 ENSDARG00000102303 7 1 - - - - 1.000 - - - - tripartite motif containing 35-21 [Source:ZFIN;Acc:ZDB-GENE-060503-673]
16. ctssa ctssa 24 1 - - - - 1.000 - - - -
17. si:ch211-217k17.8 ENSDARG00000095434 3 1 - 1.000 - - - - - - - si:ch211-217k17.8 [Source:ZFIN;Acc:ZDB-GENE-031010-46]
18. abo ENSDARG00000019207 16 1 - 1.000 - - - - - - - ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-081104-23]
19. CYP46A1 CYP46A1 16 1 - 1.000 - - - - - - -
20. slc5a5 ENSDARG00000005392 6 1 - - - - 1.000 - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
21. CR556708.1 ENSDARG00000100565 6 1 - - - - 1.000 - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
22. pth2 ENSDARG00000022951 7 1 - - - - 1.000 - - - - parathyroid hormone 2 [Source:ZFIN;Acc:ZDB-GENE-041102-1]
23. zgc:101553 zgc:101553 1 1 - - - 1.000 - - - - -
24. ftr55 ENSDARG00000009161 3 1 - - - - 1.000 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
25. ttc25 ENSDARG00000058140 2 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
26. U6_10 U6_10 0 1 - - - - 1.000 - - - -
27. BX119910.9 BX119910.9 7 1 - - - - 1.000 - - - -
28. CU633740.1 CU633740.1 8 1 - - - - 1.000 - - - -
29. ccdc24 ENSDARG00000038793 7 1 - - - - 1.000 - - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
30. CR936465.1 CR936465.1 7 1 - - - 1.000 - - - - -
31. ccr6a ENSDARG00000087474 10 1 - - - - 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
32. glis1b ENSDARG00000027933 14 1 - - - - 1.000 - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
33. BX548067.4 BX548067.4 0 1 - - - - 1.000 - - - -
34. si:ch211-149k23.10 si:ch211-149k23.10 10 1 - - - - 1.000 - - - -
35. cpdb ENSDARG00000053877 5 1 - - - - 1.000 - - - - carboxypeptidase D, b [Source:ZFIN;Acc:ZDB-GENE-060929-1270]
36. zgc:92590 ENSDARG00000040282 13 1 - - - - 1.000 - - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
37. btr27 btr27 0 1 - - - - 1.000 - - - -
38. st6galnac ENSDARG00000086292 29 1 - 1.000 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
39. CU929148.1 CU929148.1 0 1 - - - - 1.000 - - - -
40. si:zfos-1762d12.1 si:zfos-1762d12.1 5 1 - 1.000 - - - - - - -
41. CABZ01069022.1 ENSDARG00000105692 16 1 - 1.000 - - - - - - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
42. Metazoa_SRP_24 Metazoa_SRP_24 4 1 - - - 1.000 - - - - -
43. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 - - - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
44. si:dkey-96l17.6 ENSDARG00000094540 4 1 - 1.000 - - - - - - - si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
45. NUGGC NUGGC 9 1 - 1.000 - - - - - - -
46. GPC6_1 GPC6_1 34 1 - - - - 1.000 - - - -
47. CU596012.1 CU596012.1 24 1 - 1.000 - - - - - - -
48. si:ch211-149k23.4 si:ch211-149k23.4 0 1 - - - - 1.000 - - - -
49. si:dkey-206f10.5 si:dkey-206f10.5 1 1 - - - - 1.000 - - - -
50. si:ch211-198e13.3 5 1 - - - - 1.000 - - - - si:ch211-198e13.3, transcript variant X1
51. zgc:109965 ENSDARG00000012126 11 1 - - - - 1.000 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
52. CT027754.1 CT027754.1 0 1 - - - - 1.000 - - - -
53. gphb5 ENSDARG00000027472 8 1 - 1.000 - - - - - - - glycoprotein hormone beta 5 [Source:ZFIN;Acc:ZDB-GENE-090319-4]
54. SOX8 SOX8 22 1 - - - - 1.000 - - - -
55. si:ch211-86k6.3 si:ch211-86k6.3 1 1 - - - - 1.000 - - - -
56. lacc1 ENSDARG00000076914 11 1 - 1.000 - - - - - - - laccase (multicopper oxidoreductase) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-155]
57. mlphb ENSDARG00000062481 14 1 - - - - 1.000 - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
58. si:ch211-196c10.5 si:ch211-196c10.5 3 1 - - - 1.000 - - - - -
59. fam86a fam86a 174 1 - 1.000 - - - - - - -
60. si:ch211-113a14.14 si:ch211-113a14.14 3 1 - - - - 1.000 - - - -
61. ddr2b ENSDARG00000058695 7 1 - - - - 1.000 - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
62. Telomerase-vert Telomerase-vert 8 1 - - - - 1.000 - - - -
63. pou6f2 ENSDARG00000086362 135 1 - 1.000 - - - - - - - POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-091118-71]
64. CABZ01029902.1 CABZ01029902.1 0 1 - - - - 1.000 - - - -
65. tmem123 ENSDARG00000095674 66 1 - 1.000 - - - - - - - transmembrane protein 123 [Source:ZFIN;Acc:ZDB-GENE-050419-69]
66. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 1 - - - - 1.000 - - - - Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
67. tmem54 tmem54 3 1 - - - - 1.000 - - - -
68. ENSDARG00000037617 ENSDARG00000037617 1 1 - - - - 1.000 - - - -
69. Mar-11 Mar-11 5 1 - - - - 1.000 - - - -
70. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - 1.000 - - - - - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
71. dmrt1 ENSDARG00000007349 16 1 - - - 1.000 - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
72. hp ENSDARG00000051890, ENSDARG00000095807 4 1 - - - - 1.000 - - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
73. TRIM8 TRIM8 5 1 - - - - 1.000 - - - -
74. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - 1.000 - - - -
75. ENKD1 ENSDARG00000043550 44 1 - 1.000 - - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
76. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - 1.000 - - - - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
77. CR352258.1 CR352258.1 3 1 - - - - 1.000 - - - -
78. CABZ01058422.1 CABZ01058422.1 0 1 - - - - 1.000 - - - -
79. igsf21b ENSDARG00000056084 6 1 - - - - 1.000 - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
80. Vault_1 Vault_1 6 1 - - - - 1.000 - - - -
81. zgc:172323 ENSDARG00000053201 1 1 - - - - 1.000 - - - - zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
82. si:dkey-222f2.6 si:dkey-222f2.6 1 1 - - - - 1.000 - - - -
83. CCDC96 ENSDARG00000035963 5 1 - - - - 1.000 - - - - coiled-coil domain containing 96 [Source:ZFIN;Acc:ZDB-GENE-081022-156]
84. CAPN2 CAPN2 1497 1 - 1.000 - - - - - - -
85. BX546446.1 BX546446.1 0 1 - - - - 1.000 - - - -
86. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
87. dpyda dpyda 12 1 - - - - 1.000 - - - -
88. CABZ01030889.1 CABZ01030889.1 4 1 - - - - 1.000 - - - -
89. prelp ENSDARG00000070597 99 1 - - - - 1.000 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
90. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 - - - - 1.000 - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
91. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1 - 1.000 - - - - - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
92. zgc:171220 ENSDARG00000102959 164 1 - 1.000 - - - - - - - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
93. ENSDARG00000089797 ENSDARG00000089797 50 1 - - - 1.000 - - - - -
94. si:ch211-171h4.5 ENSDARG00000077337 3 1 - - - - 1.000 - - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
95. pax1b ENSDARG00000073814 105 1 - 1.000 - - - - - - - paired box 1b [Source:ZFIN;Acc:ZDB-GENE-060503-372]
96. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - 1.000 - - - -
97. MMP25 MMP25 0 1 - - - - 1.000 - - - -
98. rnh1 ENSDARG00000086631 14 1 - 1.000 - - - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
99. guk1b ENSDARG00000005776 23 1 - - - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
100. si:dkey-211g8.6 ENSDARG00000063088 19 1 - 1.000 - - - - - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]

There are 673 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA