Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3RF3

Gene Name Gene ID Reads Annotation
SH3RF3 ENSDARG00000102334 1 SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]










Genes with expression patterns similar to SH3RF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3RF3 ENSDARG00000102334 1 3 1.000 - 1.000 - 1.000 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
2. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 2 1.000 - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
3. fubp3 ENSDARG00000086896 21 1.938 1.000 - 0.938 - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
4. tdo2b ENSDARG00000023176 8 1.806 1.000 - - - 0.806 - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
5. usp34 0 1 - - - - 1.000 - - - - ubiquitin specific peptidase 34
6. PLEKHA1 PLEKHA1 5 1 - - 1.000 - - - - - -
7. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - - 1.000 - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
8. si:dkey-188i13.7 ENSDARG00000078389 81 1 - - - - 1.000 - - - - si:dkey-188i13.7 [Source:ZFIN;Acc:ZDB-GENE-090312-190]
9. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - - - - 1.000 - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
10. si:dkey-4p15.4 ENSDARG00000096658 0 1 - - - - 1.000 - - - - si:dkey-4p15.4 [Source:ZFIN;Acc:ZDB-GENE-121214-305]
11. si:dkey-156k2.8 ENSDARG00000087743 0 1 - - - - 1.000 - - - - si:dkey-156k2.8 [Source:ZFIN;Acc:ZDB-GENE-110914-111]
12. CR759879.1 ENSDARG00000088069 1 1 1.000 - - - - - - - - interferon-induced protein with tetratricopeptide repeats 5 [Source:NCBI gene;Acc:572297]
13. gpr19 ENSDARG00000102226 17 1 1.000 - - - - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
14. si:dkey-34f16.9 si:dkey-34f16.9 1 1 1.000 - - - - - - - -
15. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - - - 1.000 - - - -
16. si:dkeyp-50f5.4 si:dkeyp-50f5.4 0 1 - - - - 1.000 - - - -
17. CR352260.1 CR352260.1 11 1 - - - - 1.000 - - - -
18. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - 1.000 - - - - - -
19. BX324198.1 BX324198.1 12 1 - - 1.000 - - - - - -
20. si:zfos-1697h8.2 si:zfos-1697h8.2 0 1 - - 1.000 - - - - - -
21. si:dkey-246e1.1_1 si:dkey-246e1.1_1 0 1 - - 1.000 - - - - - -
22. BX004993.1 BX004993.1 1 1 - - 1.000 - - - - - -
23. pmch ENSDARG00000073959 1 1 - - - - 1.000 - - - - pro-melanin-concentrating hormone [Source:ZFIN;Acc:ZDB-GENE-041210-150]
24. VOPP1_1 VOPP1_1 73 1 1.000 - - - - - - - -
25. sh2b3 ENSDARG00000069958 0 1 - - - - 1.000 - - - - SH2B adaptor protein 3 [Source:ZFIN;Acc:ZDB-GENE-041210-359]
26. xkr6 xkr6 286 1 1.000 - - - - - - - -
27. PLD4 1 1 - - - - 1.000 - - - - phospholipase D family member 4
28. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 1.000 - - - - - - - - apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
29. ARHGAP6 33 1 1.000 - - - - - - - - Rho GTPase activating protein 6
30. fgd1 ENSDARG00000100402 18 1 - - - - 1.000 - - - - FYVE, RhoGEF and PH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-33]
31. casp6l2 ENSDARG00000070368, ENSDARG00000111446 1 1 - - - - 1.000 - - - - caspase 6, apoptosis-related cysteine peptidase, like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-12]
32. VWDE_1 VWDE_1 2 1 - - - - 1.000 - - - -
33. CABZ01090975.1 CABZ01090975.1 9 1 - - 1.000 - - - - - -
34. PDE4A ENSDARG00000032344 1 1 - - - - 1.000 - - - - phosphodiesterase 4A, cAMP-specific [Source:ZFIN;Acc:ZDB-GENE-131125-7]
35. FKBPL ENSDARG00000095322 82 1 1.000 - - - - - - - - FK506 binding protein like [Source:ZFIN;Acc:ZDB-GENE-030131-4744]
36. CR774179.1 ENSDARG00000086969 3 1 - - - - 1.000 - - - -
37. AL935186.6 ENSDARG00000112275 5 1 - - - - 1.000 - - - -
38. si:zfos-2548d7.1 si:zfos-2548d7.1 3 1 - - - - 1.000 - - - -
39. ca10b ENSDARG00000009568 8 1 - - - - 1.000 - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
40. slco4a1 ENSDARG00000075948 74 1 1.000 - - - - - - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
41. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - - - - 1.000 - - - -
42. CABZ01059099.1 ENSDARG00000067927 1 1 - - - - 1.000 - - - - protein eva-1 homolog A-like [Source:NCBI gene;Acc:101882949]
43. zgc:172244 zgc:172244 4 1 - - 1.000 - - - - - -
44. DUSP19 DUSP19 10 1 1.000 - - - - - - - -
45. SYPL1 ENSDARG00000077356 1 1 - - - - 1.000 - - - - synaptophysin-like 1 [Source:ZFIN;Acc:ZDB-GENE-110420-2]
46. si:ch211-190k17.31 si:ch211-190k17.31 29 1 1.000 - - - - - - - -
47. WNK3 WNK3 36 1 1.000 - - - - - - - -
48. pcdh1gb9 ENSDARG00000088475 71 1 1.000 - - - - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
49. ZNF337_7 ZNF337_7 198 1 1.000 - - - - - - - -
50. tmem43 2 1 - - 1.000 - - - - - - transmembrane protein 43
51. slc44a5a ENSDARG00000017398 5 1 - - - - 1.000 - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
52. CR855307.2 CR855307.2 1 1 - - - - 1.000 - - - -
53. CU075911.1 CU075911.1 2 1 - - 1.000 - - - - - -
54. si:dkey-47k20.1 ENSDARG00000092523 2 1 - - - - 1.000 - - - - si:dkey-47k20.1 [Source:ZFIN;Acc:ZDB-GENE-060503-641]
55. ZP2_3 ZP2_3 2 1 - - 1.000 - - - - - -
56. gria2b ENSDARG00000052765 188 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
57. CU929521.1 CU929521.1 1 1 - - 1.000 - - - - - -
58. si:ch211-113e8.5 ENSDARG00000069707 0 1 - - - - 1.000 - - - - si:ch211-113e8.5 [Source:ZFIN;Acc:ZDB-GENE-090312-189]
59. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
60. nfixb ENSDARG00000061836 7 1 1.000 - - - - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
61. CABZ01059392.1 ENSDARG00000063108 3 1 - - 1.000 - - - - - - uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
62. fstl5 ENSDARG00000040198 213 1 1.000 - - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
63. ntng1a ENSDARG00000014973 23 1 1.000 - - - - - - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
64. efemp2b_1 ENSDARG00000020811 77 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
65. si:dkeyp-73d8.6 ENSDARG00000079589 1 1 - - - - 1.000 - - - - si:dkeyp-73d8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-683]
66. Telomerase-vert Telomerase-vert 8 1 1.000 - - - - - - - -
67. adprhl1 ENSDARG00000041589 34 1 1.000 - - - - - - - - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
68. si:ch211-202n12.3 si:ch211-202n12.3 0 1 - - - - 1.000 - - - -
69. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1 - - - - 1.000 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
70. FJX1 ENSDARG00000035873 22 1 1.000 - - - - - - - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
71. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - 1.000 - - - -
72. CR759920.2 CR759920.2 1 1 - - - - 1.000 - - - -
73. si:ch73-115f13.1 si:ch73-115f13.1 15 1 1.000 - - - - - - - -
74. CU570781.1 ENSDARG00000094656 49 1 1.000 - - - - - - - -
75. ndr2 ENSDARG00000101279 2 1 - - - - 1.000 - - - - nodal-related 2 [Source:ZFIN;Acc:ZDB-GENE-990415-181]
76. mpeg1 mpeg1 123 1 - - - - 1.000 - - - -
77. meis2a ENSDARG00000098240 5 1 1.000 - - - - - - - - Meis homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-020122-2]
78. CR388046.2 ENSDARG00000105519 0 1 - - - - 1.000 - - - -
79. CABZ01053483.1 CABZ01053483.1 5 1 - - 1.000 - - - - - -
80. cacna1bb ENSDARG00000079295, ENSDARG00000116562 1 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4]
81. UNC13A UNC13A 36 1 1.000 - - - - - - - -
82. kcnk2b ENSDARG00000007151 1 1 - - - - 1.000 - - - - potassium channel, subfamily K, member 2b [Source:ZFIN;Acc:ZDB-GENE-051120-69]
83. BX005421.4 BX005421.4 11 1 - - 1.000 - - - - - -
84. CABZ01072254.1 ENSDARG00000076111 4 1 1.000 - - - - - - - - glucoside xylosyltransferase 1a [Source:NCBI gene;Acc:100333154]
85. aldh2.2_1 ENSDARG00000028087 279 1 1.000 - - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
86. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - 1.000 - - - - - -
87. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - 1.000 - - - -
88. HCN2 HCN2 0 1 - - 1.000 - - - - - -
89. GPC5 GPC5 11 1 - - - - 1.000 - - - -
90. v2rh10 ENSDARG00000061883 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, h10 [Source:ZFIN;Acc:ZDB-GENE-050419-42]
91. nms 19 1 - - - - 1.000 - - - - neuromedin S, transcript variant X1
92. si:dkey-191g9.5 ENSDARG00000056080 60 1 1.000 - - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
93. zgc:113307 ENSDARG00000044894 17 1 - - - - 1.000 - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
94. AL929276.1 ENSDARG00000113065 0 1 - - - - 1.000 - - - -
95. btbd3b ENSDARG00000087517 107 1 1.000 - - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
96. tbkbp1 ENSDARG00000061473 24 1 1.000 - - - - - - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
97. rassf4 ENSDARG00000012460 43 1 1.000 - - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
98. MDFI ENSDARG00000089564 8 1 - - - - 1.000 - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
99. si:ch211-225p5.10 si:ch211-225p5.10 4 1 - - 1.000 - - - - - -
100. CR382372.2 CR382372.2 136 1 1.000 - - - - - - - -

There are 558 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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