Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3RF3

Gene Name Gene ID Reads Annotation
SH3RF3 ENSDARG00000102334 1 SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]










Genes with expression patterns similar to SH3RF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3RF3 ENSDARG00000102334 1 3 1.000 - 1.000 - 1.000 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
2. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 2 1.000 - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
3. fubp3 ENSDARG00000086896 21 1.938 1.000 - 0.938 - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
4. tdo2b ENSDARG00000023176 8 1.806 1.000 - - - 0.806 - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
5. AL935186.6 ENSDARG00000112275 5 1 - - - - 1.000 - - - -
6. CABZ01035647.1 CABZ01035647.1 5 1 - - 1.000 - - - - - -
7. CR942805.1 CR942805.1 94 1 - - - - 1.000 - - - -
8. gng2_1 ENSDARG00000056831 113 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
9. CABZ01072096.1 ENSDARG00000079483 168 1 1.000 - - - - - - - -
10. C25H11orf74 C25H11orf74 161 1 1.000 - - - - - - - -
11. lifra ENSDARG00000098857 11 1 - - - - 1.000 - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
12. si:ch211-113e8.5 ENSDARG00000069707 0 1 - - - - 1.000 - - - - si:ch211-113e8.5 [Source:ZFIN;Acc:ZDB-GENE-090312-189]
13. cpa1 ENSDARG00000030915 0 1 - - - - 1.000 - - - - carboxypeptidase A1 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-050522-438]
14. pcdh1gb9 ENSDARG00000088475 71 1 1.000 - - - - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
15. cd22 ENSDARG00000053005 3 1 1.000 - - - - - - - - cd22 molecule [Source:ZFIN;Acc:ZDB-GENE-050522-521]
16. Telomerase-vert Telomerase-vert 8 1 1.000 - - - - - - - -
17. si:dkey-246e1.1_1 si:dkey-246e1.1_1 0 1 - - 1.000 - - - - - -
18. xkr6 xkr6 286 1 1.000 - - - - - - - -
19. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 1.000 - - - - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
20. psmb8 psmb8 0 1 - - - - 1.000 - - - -
21. si:dkey-188i13.7 ENSDARG00000078389 81 1 - - - - 1.000 - - - - si:dkey-188i13.7 [Source:ZFIN;Acc:ZDB-GENE-090312-190]
22. C19H18orf21 C19H18orf21 338 1 - - - - 1.000 - - - -
23. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
24. ntrk1 ENSDARG00000004586 19 1 1.000 - - - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
25. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
26. CR774179.1 ENSDARG00000086969 3 1 - - - - 1.000 - - - -
27. si:ch211-163b2.4 ENSDARG00000094890 140 1 1.000 - - - - - - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
28. fshr ENSDARG00000071494, ENSDARG00000112820 3 1 - - - - 1.000 - - - - follicle stimulating hormone receptor [Source:ZFIN;Acc:ZDB-GENE-020423-5]
29. LOXL2 LOXL2 2 1 - - 1.000 - - - - - -
30. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
31. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
32. si:dkey-16n15.6 ENSDARG00000095805 18 1 - - - - 1.000 - - - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
33. PHF15 PHF15 2 1 - - - - 1.000 - - - -
34. si:rp71-10g3.1 si:rp71-10g3.1 6 1 - - - - 1.000 - - - -
35. ndr2 ENSDARG00000101279 2 1 - - - - 1.000 - - - - nodal-related 2 [Source:ZFIN;Acc:ZDB-GENE-990415-181]
36. smad6b ENSDARG00000031763 12 1 - - - - 1.000 - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
37. CABZ01079258.1 CABZ01079258.1 3 1 - - - - 1.000 - - - -
38. abhd8 abhd8 0 1 - - - - 1.000 - - - -
39. si:dkey-233e3.6 si:dkey-233e3.6 1 1 1.000 - - - - - - - -
40. noxo1b ENSDARG00000056374 78 1 1.000 - - - - - - - - NADPH oxidase organizer 1b [Source:ZFIN;Acc:ZDB-GENE-101203-1]
41. CR352260.1 CR352260.1 11 1 - - - - 1.000 - - - -
42. casp6l2 ENSDARG00000070368, ENSDARG00000111446 1 1 - - - - 1.000 - - - - caspase 6, apoptosis-related cysteine peptidase, like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-12]
43. zgc:112234 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 0 1 - - 1.000 - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
44. rsph4a ENSDARG00000067606 132 1 1.000 - - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
45. WDR6 ENSDARG00000078571 28 1 1.000 - - - - - - - - WD repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-081104-368]
46. BX119910.8 BX119910.8 6 1 1.000 - - - - - - - -
47. si:dkey-156k2.8 ENSDARG00000087743 0 1 - - - - 1.000 - - - - si:dkey-156k2.8 [Source:ZFIN;Acc:ZDB-GENE-110914-111]
48. CDH7 16 1 1.000 - - - - - - - - cadherin 7, type 2, transcript variant X1
49. PATL2 PATL2 10 1 - - - - 1.000 - - - -
50. mir92a-1 20 1 1.000 - - - - - - - - microRNA 92a-1
51. si:dkey-47k20.1 ENSDARG00000092523 2 1 - - - - 1.000 - - - - si:dkey-47k20.1 [Source:ZFIN;Acc:ZDB-GENE-060503-641]
52. TNFRSF14_8 TNFRSF14_8 6 1 - - - - 1.000 - - - -
53. IMPG2 IMPG2 1 1 1.000 - - - - - - - -
54. CABZ01085626.1 ENSDARG00000117294 8 1 1.000 - - - - - - - -
55. ABCD2_1 ABCD2_1 13 1 - - 1.000 - - - - - -
56. CACNA2D1_1 ENSDARG00000073752 2 1 1.000 - - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
57. v2ra16 ENSDARG00000091990 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, a16 [Source:ZFIN;Acc:ZDB-GENE-050419-85]
58. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
59. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - 1.000 - - - - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
60. GABRR3 GABRR3 3 1 - - 1.000 - - - - - -
61. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
62. PLBD1 ENSDARG00000063313 1 1 1.000 - - - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
63. ydjc ENSDARG00000062655 5 1 1.000 - - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
64. GSTK1 ENSDARG00000056510 14 1 - - 1.000 - - - - - - glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298]
65. si:ch211-180a12.2 ENSDARG00000087857 2 1 - - - - 1.000 - - - - si:ch211-180a12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-236]
66. VSTM5 4 1 1.000 - - - - - - - - V-set and transmembrane domain containing 5
67. si:dkeyp-72g9.5 si:dkeyp-72g9.5 1 1 1.000 - - - - - - - -
68. nphs2 ENSDARG00000042850 31 1 - - - - 1.000 - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
69. si:dkey-264b2.3 19 1 1.000 - - - - - - - - si:dkey-264b2.3, transcript variant X2
70. dre-mir-429b ENSDARG00000082968 212 1 1.000 - - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
71. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
72. CR847844.3 CR847844.3 1 1 1.000 - - - - - - - -
73. CR759816.1 ENSDARG00000098977 27 1 - - - - 1.000 - - - -
74. si:ch73-115f13.1 si:ch73-115f13.1 15 1 1.000 - - - - - - - -
75. dnah9 ENSDARG00000103383 2 1 - - - - 1.000 - - - - dynein, axonemal, heavy chain 9 [Source:ZFIN;Acc:ZDB-GENE-020925-1]
76. ablim1a ENSDARG00000060149 228 1 1.000 - - - - - - - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
77. SYPL1 ENSDARG00000077356 1 1 - - - - 1.000 - - - - synaptophysin-like 1 [Source:ZFIN;Acc:ZDB-GENE-110420-2]
78. NPDC1 NPDC1 126 1 1.000 - - - - - - - -
79. DUSP19 DUSP19 10 1 1.000 - - - - - - - -
80. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - 1.000 - - - - si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
81. creb5b ENSDARG00000070536 9 1 - - 1.000 - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
82. CABZ01046997.2 CABZ01046997.2 7 1 - - - - 1.000 - - - -
83. LRRK1 ENSDARG00000007398 2 1 - - - - 1.000 - - - - leucine-rich repeat kinase 1 [Source:ZFIN;Acc:ZDB-GENE-101019-2]
84. HCN2 HCN2 0 1 - - 1.000 - - - - - -
85. slc35f1 ENSDARG00000053003 0 1 - - 1.000 - - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
86. AL929276.1 ENSDARG00000113065 0 1 - - - - 1.000 - - - -
87. CABZ01086801.1 CABZ01086801.1 41 1 - - - - 1.000 - - - -
88. PLCB1 2 1 - - 1.000 - - - - - - phospholipase C beta 1
89. si:ch211-277g23.4 si:ch211-277g23.4 0 1 - - - - 1.000 - - - -
90. marco ENSDARG00000059294 17 1 - - 1.000 - - - - - - macrophage receptor with collagenous structure [Source:ZFIN;Acc:ZDB-GENE-120514-2]
91. CR847990.1 CR847990.1 21 1 1.000 - - - - - - - -
92. UNC13A UNC13A 36 1 1.000 - - - - - - - -
93. AL929453.1 ENSDARG00000115950 31 1 1.000 - - - - - - - -
94. si:dkey-191g9.5 ENSDARG00000056080 60 1 1.000 - - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
95. si:ch211-286e11.3 si:ch211-286e11.3 20 1 1.000 - - - - - - - -
96. FKBPL ENSDARG00000095322 82 1 1.000 - - - - - - - - FK506 binding protein like [Source:ZFIN;Acc:ZDB-GENE-030131-4744]
97. aire ENSDARG00000056784 0 1 - - - - 1.000 - - - - autoimmune regulator [Source:ZFIN;Acc:ZDB-GENE-071008-4]
98. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
99. LPHN1_1 LPHN1_1 7 1 - - - - 1.000 - - - -
100. tlr8b ENSDARG00000073675 0 1 - - - - 1.000 - - - - toll-like receptor 8b [Source:ZFIN;Acc:ZDB-GENE-040219-12]

There are 558 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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