Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3RF3

Gene Name Gene ID Reads Annotation
SH3RF3 ENSDARG00000102334 1 SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]










Genes with expression patterns similar to SH3RF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3RF3 ENSDARG00000102334 1 3 1.000 - 1.000 - 1.000 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
2. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 2 1.000 - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
3. fubp3 ENSDARG00000086896 21 1.938 1.000 - 0.938 - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
4. tdo2b ENSDARG00000023176 8 1.806 1.000 - - - 0.806 - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
5. si:dkey-80c24.1 ENSDARG00000070692 1 1 1.000 - - - - - - - - si:dkey-80c24.1 [Source:ZFIN;Acc:ZDB-GENE-061207-69]
6. nid2b ENSDARG00000009471 4 1 - - - - 1.000 - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
7. BX601644.1 ENSDARG00000090632 2 1 - - - - 1.000 - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
8. smad6b ENSDARG00000031763 12 1 - - - - 1.000 - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
9. wnt5a ENSDARG00000104973 21 1 1.000 - - - - - - - - wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
10. rimbp2 ENSDARG00000001154, ENSDARG00000093752 1 1 1.000 - - - - - - - - RIMS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040724-96]
11. si:ch73-44m9.1 ENSDARG00000077115 3 1 1.000 - - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
12. aglb ENSDARG00000100352 22 1 1.000 - - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
13. GABRR3 GABRR3 3 1 - - 1.000 - - - - - -
14. CACNA2D1_1 ENSDARG00000073752 2 1 1.000 - - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
15. zgc:113307 ENSDARG00000044894 17 1 - - - - 1.000 - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
16. casp6l2 ENSDARG00000070368, ENSDARG00000111446 1 1 - - - - 1.000 - - - - caspase 6, apoptosis-related cysteine peptidase, like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-12]
17. sirt7 ENSDARG00000060645 1 1 - - - - 1.000 - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
18. BX548011.3 ENSDARG00000113526 2 1 - - - - 1.000 - - - -
19. PTCHD2 PTCHD2 2 1 1.000 - - - - - - - -
20. serinc2l ENSDARG00000053425 5 1 1.000 - - - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
21. si:dkey-43k4.4 si:dkey-43k4.4 4 1 1.000 - - - - - - - -
22. si:dkey-264b2.3 19 1 1.000 - - - - - - - - si:dkey-264b2.3, transcript variant X2
23. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
24. itfg2 ENSDARG00000002174 114 1 1.000 - - - - - - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
25. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
26. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
27. CR382372.2 CR382372.2 136 1 1.000 - - - - - - - -
28. CABZ01080435.1 CABZ01080435.1 1 1 - - - - 1.000 - - - -
29. PAK6 PAK6 5 1 - - 1.000 - - - - - -
30. CABZ01021454.2 CABZ01021454.2 3 1 - - - - 1.000 - - - -
31. AL954746.1 AL954746.1 0 1 - - 1.000 - - - - - -
32. CU570781.1 ENSDARG00000094656 49 1 1.000 - - - - - - - -
33. FP245525.1 FP245525.1 3 1 - - 1.000 - - - - - -
34. helq ENSDARG00000079818 133 1 1.000 - - - - - - - - helicase, POLQ like [Source:ZFIN;Acc:ZDB-GENE-060503-421]
35. smtlb ENSDARG00000017251 7 1 - - - - 1.000 - - - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
36. mpeg1 mpeg1 123 1 - - - - 1.000 - - - -
37. smpdl3a ENSDARG00000053119 1 1 - - - - 1.000 - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
38. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 1.000 - - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
39. CABZ01071058.1 CABZ01071058.1 4 1 - - 1.000 - - - - - -
40. TRPM4 TRPM4 60 1 1.000 - - - - - - - -
41. RP1 ENSDARG00000077687 6 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
42. RORC ENSDARG00000087195 9 1 - - 1.000 - - - - - - RAR-related orphan receptor C [Source:ZFIN;Acc:ZDB-GENE-110411-42]
43. nms 19 1 - - - - 1.000 - - - - neuromedin S, transcript variant X1
44. CABZ01046997.2 CABZ01046997.2 7 1 - - - - 1.000 - - - -
45. glcea ENSDARG00000005095 33 1 1.000 - - - - - - - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
46. tmem43 2 1 - - 1.000 - - - - - - transmembrane protein 43
47. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - - - 1.000 - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
48. slc35f1 ENSDARG00000053003 0 1 - - 1.000 - - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
49. marco ENSDARG00000059294 17 1 - - 1.000 - - - - - - macrophage receptor with collagenous structure [Source:ZFIN;Acc:ZDB-GENE-120514-2]
50. si:dkey-15h8.14 si:dkey-15h8.14 139 1 1.000 - - - - - - - -
51. PLEKHA1 PLEKHA1 5 1 - - 1.000 - - - - - -
52. ydjc ENSDARG00000062655 5 1 1.000 - - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
53. WNK3 WNK3 36 1 1.000 - - - - - - - -
54. CR352260.1 CR352260.1 11 1 - - - - 1.000 - - - -
55. BX936386.1 ENSDARG00000097166 5 1 - - 1.000 - - - - - -
56. cpa1 ENSDARG00000030915 0 1 - - - - 1.000 - - - - carboxypeptidase A1 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-050522-438]
57. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
58. CABZ01090975.1 CABZ01090975.1 9 1 - - 1.000 - - - - - -
59. SYPL1 ENSDARG00000077356 1 1 - - - - 1.000 - - - - synaptophysin-like 1 [Source:ZFIN;Acc:ZDB-GENE-110420-2]
60. SNORA16 SNORA16 0 1 - - - - 1.000 - - - -
61. zgc:101553 zgc:101553 1 1 - - 1.000 - - - - - -
62. cacng8a ENSDARG00000020450 32 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
63. NLRP1 NLRP1 54 1 1.000 - - - - - - - -
64. rassf4 ENSDARG00000012460 43 1 1.000 - - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
65. CABZ01117474.1 CABZ01117474.1 2 1 1.000 - - - - - - - -
66. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - 1.000 - - - - si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
67. cyp27a7 ENSDARG00000033802 216 1 1.000 - - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
68. fgd1 ENSDARG00000100402 18 1 - - - - 1.000 - - - - FYVE, RhoGEF and PH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-33]
69. si:dkey-230i18.1 si:dkey-230i18.1 3 1 - - 1.000 - - - - - -
70. aldh2.2_1 ENSDARG00000028087 279 1 1.000 - - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
71. si:ch73-223d24.4 si:ch73-223d24.4 5 1 - - 1.000 - - - - - -
72. BX324142.2 ENSDARG00000117006 1 1 - - - - 1.000 - - - -
73. si:ch1073-467m9.2 si:ch1073-467m9.2 2 1 - - - - 1.000 - - - -
74. C25H11orf74 C25H11orf74 161 1 1.000 - - - - - - - -
75. si:ch211-225h9.2 si:ch211-225h9.2 16 1 1.000 - - - - - - - -
76. arhgap20 ENSDARG00000089326 10 1 - - 1.000 - - - - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
77. neu4 ENSDARG00000057677 1 1 - - - - 1.000 - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
78. si:dkeyp-72g9.5 si:dkeyp-72g9.5 1 1 1.000 - - - - - - - -
79. si:ch211-106g4.2 si:ch211-106g4.2 6 1 - - 1.000 - - - - - -
80. si:dkey-13n15.11 ENSDARG00000078002 8 1 - - - - 1.000 - - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
81. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 1.000 - - - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
82. WWC1 ENSDARG00000076041 26 1 1.000 - - - - - - - - WW and C2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091118-8]
83. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - 1.000 - - - -
84. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 1 - - 1.000 - - - - - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
85. BX649394.1 BX649394.1 1 1 - - - - 1.000 - - - -
86. cd22 ENSDARG00000053005 3 1 1.000 - - - - - - - - cd22 molecule [Source:ZFIN;Acc:ZDB-GENE-050522-521]
87. LAMB3 LAMB3 31 1 - - - - 1.000 - - - -
88. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - 1.000 - - - - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
89. si:dkeyp-73d8.6 ENSDARG00000079589 1 1 - - - - 1.000 - - - - si:dkeyp-73d8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-683]
90. zgc:77938 ENSDARG00000088366 74 1 1.000 - - - - - - - - zgc:77938 [Source:ZFIN;Acc:ZDB-GENE-040426-1910]
91. BX470224.1 ENSDARG00000092793 22 1 - - - - 1.000 - - - -
92. celsr3 ENSDARG00000055825 1 1 - - - - 1.000 - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]
93. zgc:112234 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 0 1 - - 1.000 - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
94. nphs1 ENSDARG00000060758 5 1 - - - - 1.000 - - - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
95. CR387932.2 CR387932.2 3 1 - - - - 1.000 - - - -
96. FAM13C FAM13C 1 1 - - - - 1.000 - - - -
97. gabbr1a ENSDARG00000018967 2 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
98. mmrn2a ENSDARG00000076135 37 1 1.000 - - - - - - - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
99. GRIK3 ENSDARG00000077715 178 1 1.000 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
100. wdr20b ENSDARG00000041239 0 1 - - - - 1.000 - - - - WD repeat domain 20b [Source:ZFIN;Acc:ZDB-GENE-041014-234]

There are 558 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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