Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3RF3

Gene Name Gene ID Reads Annotation
SH3RF3 ENSDARG00000102334 1 SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]










Genes with expression patterns similar to SH3RF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3RF3 ENSDARG00000102334 1 3 1.000 - 1.000 - 1.000 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
2. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 2 1.000 - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
3. fubp3 ENSDARG00000086896 21 1.938 1.000 - 0.938 - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
4. tdo2b ENSDARG00000023176 8 1.806 1.000 - - - 0.806 - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
5. TTF1_3 TTF1_3 215 1 1.000 - - - - - - - -
6. PDE1C PDE1C 1 1 1.000 - - - - - - - -
7. gabbr1a ENSDARG00000018967 2 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
8. Telomerase-vert Telomerase-vert 8 1 1.000 - - - - - - - -
9. GSTK1 ENSDARG00000056510 14 1 - - 1.000 - - - - - - glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298]
10. slc23a2 ENSDARG00000017365, ENSDARG00000114446 6 1 - - - - 1.000 - - - - solute carrier family 23 (ascorbic acid transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-090521-3]
11. slc35f1 ENSDARG00000053003 0 1 - - 1.000 - - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
12. zp2l1 ENSDARG00000055415, ENSDARG00000110573 2 1 - - - - 1.000 - - - - zona pellucida glycoprotein 2, like 1 [Source:ZFIN;Acc:ZDB-GENE-060818-3]
13. gpc2 ENSDARG00000104217 10 1 - - - - 1.000 - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
14. tbc1d9 ENSDARG00000043627, ENSDARG00000059900 3 1 1.000 - - - - - - - - TBC1 domain family, member 9 (with GRAM domain) [Source:ZFIN;Acc:ZDB-GENE-060810-33]
15. pmch ENSDARG00000073959 1 1 - - - - 1.000 - - - - pro-melanin-concentrating hormone [Source:ZFIN;Acc:ZDB-GENE-041210-150]
16. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
17. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - - - 1.000 - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
18. si:dkey-80c24.1 ENSDARG00000070692 1 1 1.000 - - - - - - - - si:dkey-80c24.1 [Source:ZFIN;Acc:ZDB-GENE-061207-69]
19. noxo1b ENSDARG00000056374 78 1 1.000 - - - - - - - - NADPH oxidase organizer 1b [Source:ZFIN;Acc:ZDB-GENE-101203-1]
20. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - 1.000 - - - -
21. CR936371.2 ENSDARG00000117302 2 1 - - 1.000 - - - - - -
22. BX649417.1 ENSDARG00000117387 1 1 - - 1.000 - - - - - -
23. smad6b ENSDARG00000031763 12 1 - - - - 1.000 - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
24. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 1 - - 1.000 - - - - - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
25. VWDE ENSDARG00000103443 10 1 - - 1.000 - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
26. FP245525.1 FP245525.1 3 1 - - 1.000 - - - - - -
27. FJX1 ENSDARG00000035873 22 1 1.000 - - - - - - - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
28. ECT2L 39 1 1.000 - - - - - - - - epithelial cell transforming 2 like, transcript variant X4
29. TRPM4 TRPM4 60 1 1.000 - - - - - - - -
30. U6_13 U6_13 0 1 - - 1.000 - - - - - -
31. tnr ENSDARG00000020771 20 1 1.000 - - - - - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
32. glcea ENSDARG00000005095 33 1 1.000 - - - - - - - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
33. CABZ01116714.1 CABZ01116714.1 4 1 - - 1.000 - - - - - -
34. cd22 ENSDARG00000053005 3 1 1.000 - - - - - - - - cd22 molecule [Source:ZFIN;Acc:ZDB-GENE-050522-521]
35. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
36. si:ch1073-467m9.2 si:ch1073-467m9.2 2 1 - - - - 1.000 - - - -
37. pdzd3a ENSDARG00000040568 2 1 - - - - 1.000 - - - - PDZ domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-080430-1]
38. fgd1 ENSDARG00000100402 18 1 - - - - 1.000 - - - - FYVE, RhoGEF and PH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-33]
39. si:dkey-193b15.5 ENSDARG00000092883 0 1 - - - - 1.000 - - - - si:dkey-193b15.5 [Source:ZFIN;Acc:ZDB-GENE-070912-413]
40. ros1 ENSDARG00000087197 9 1 - - 1.000 - - - - - - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
41. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1 - - - - 1.000 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
42. tmem43 2 1 - - 1.000 - - - - - - transmembrane protein 43
43. ntng1a ENSDARG00000014973 23 1 1.000 - - - - - - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
44. ntrk1 ENSDARG00000004586 19 1 1.000 - - - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
45. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 1.000 - - - - - - - -
46. aglb ENSDARG00000100352 22 1 1.000 - - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
47. rrh ENSDARG00000039534 4 1 - - - - 1.000 - - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
48. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
49. si:dkey-203o21.2 si:dkey-203o21.2 0 1 - - - - 1.000 - - - -
50. CR847990.1 CR847990.1 21 1 1.000 - - - - - - - -
51. AL935186.6 ENSDARG00000112275 5 1 - - - - 1.000 - - - -
52. CR759879.1 ENSDARG00000088069 1 1 1.000 - - - - - - - - interferon-induced protein with tetratricopeptide repeats 5 [Source:NCBI gene;Acc:572297]
53. aldh2.2_1 ENSDARG00000028087 279 1 1.000 - - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
54. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - 1.000 - - - - si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
55. v2rh10 ENSDARG00000061883 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, h10 [Source:ZFIN;Acc:ZDB-GENE-050419-42]
56. si:ch211-202n12.3 si:ch211-202n12.3 0 1 - - - - 1.000 - - - -
57. itfg2 ENSDARG00000002174 114 1 1.000 - - - - - - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
58. PLD1 PLD1 158 1 1.000 - - - - - - - -
59. CABZ01048956.1 ENSDARG00000117474 253 1 - - - - 1.000 - - - - probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
60. sh2b3 ENSDARG00000069958 0 1 - - - - 1.000 - - - - SH2B adaptor protein 3 [Source:ZFIN;Acc:ZDB-GENE-041210-359]
61. si:ch211-208f21.4 si:ch211-208f21.4 4 1 1.000 - - - - - - - -
62. GPR108_1 GPR108_1 2 1 - - 1.000 - - - - - -
63. si:dkey-191g9.5 ENSDARG00000056080 60 1 1.000 - - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
64. si:ch211-277e21.1 ENSDARG00000096800 1 1 - - - - 1.000 - - - - si:ch211-277e21.1 [Source:ZFIN;Acc:ZDB-GENE-130603-84]
65. creb5b ENSDARG00000070536 9 1 - - 1.000 - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
66. RIMS1 RIMS1 9 1 1.000 - - - - - - - -
67. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 1.000 - - - - - - - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
68. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - - - - 1.000 - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
69. zgc:194906 ENSDARG00000095773, ENSDARG00000115894 0 1 - - - - 1.000 - - - - zgc:194906 [Source:ZFIN;Acc:ZDB-GENE-080722-43]
70. CR382372.2 CR382372.2 136 1 1.000 - - - - - - - -
71. mki67ip mki67ip 0 1 - - 1.000 - - - - - -
72. rapgef6 ENSDARG00000010945 3 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6972]
73. lifra ENSDARG00000098857 11 1 - - - - 1.000 - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
74. CYP27A1 CYP27A1 4 1 - - 1.000 - - - - - -
75. fshr ENSDARG00000071494, ENSDARG00000112820 3 1 - - - - 1.000 - - - - follicle stimulating hormone receptor [Source:ZFIN;Acc:ZDB-GENE-020423-5]
76. WWC1 ENSDARG00000076041 26 1 1.000 - - - - - - - - WW and C2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091118-8]
77. dcp2_1 ENSDARG00000104242 74 1 1.000 - - - - - - - - decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
78. si:dkey-151m22.9 si:dkey-151m22.9 6 1 1.000 - - - - - - - -
79. meis2a ENSDARG00000098240 5 1 1.000 - - - - - - - - Meis homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-020122-2]
80. CR847844.3 CR847844.3 1 1 1.000 - - - - - - - -
81. zgc:171750 ENSDARG00000078638 4 1 - - - - 1.000 - - - - zgc:171750 [Source:ZFIN;Acc:ZDB-GENE-071004-30]
82. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - 1.000 - - - - - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
83. TRIM14_12 TRIM14_12 1 1 - - - - 1.000 - - - -
84. CABZ01085626.1 ENSDARG00000117294 8 1 1.000 - - - - - - - -
85. zgc:101553 zgc:101553 1 1 - - 1.000 - - - - - -
86. marco ENSDARG00000059294 17 1 - - 1.000 - - - - - - macrophage receptor with collagenous structure [Source:ZFIN;Acc:ZDB-GENE-120514-2]
87. ydjc ENSDARG00000062655 5 1 1.000 - - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
88. cldn15lb ENSDARG00000100844 46 1 1.000 - - - - - - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
89. si:ch211-225p5.10 si:ch211-225p5.10 4 1 - - 1.000 - - - - - -
90. ppp1r37_1 ENSDARG00000078458 36 1 - - - - 1.000 - - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
91. spata2l ENSDARG00000068814 152 1 1.000 - - - - - - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
92. rca2.2 ENSDARG00000095512 13 1 - - - - 1.000 - - - - regulator of complement activation group 2 gene 2 [Source:ZFIN;Acc:ZDB-GENE-060503-646]
93. abhd8 abhd8 0 1 - - - - 1.000 - - - -
94. CU075911.1 CU075911.1 2 1 - - 1.000 - - - - - -
95. CABZ01079258.1 CABZ01079258.1 3 1 - - - - 1.000 - - - -
96. DUSP19 DUSP19 10 1 1.000 - - - - - - - -
97. zgc:173711 zgc:173711 2 1 - - 1.000 - - - - - -
98. mhc1zaa_2 ENSDARG00000092162 0 1 - - 1.000 - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
99. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 1.000 - - - - - - - - apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
100. ca10b ENSDARG00000009568 8 1 - - - - 1.000 - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]

There are 558 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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