Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3RF3

Gene Name Gene ID Reads Annotation
SH3RF3 ENSDARG00000102334 1 SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]










Genes with expression patterns similar to SH3RF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3RF3 ENSDARG00000102334 1 3 1.000 - 1.000 - 1.000 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
2. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 2 1.000 - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
3. fubp3 ENSDARG00000086896 21 1.938 1.000 - 0.938 - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
4. tdo2b ENSDARG00000023176 8 1.806 1.000 - - - 0.806 - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
5. AL929453.1 ENSDARG00000115950 31 1 1.000 - - - - - - - -
6. si:dkey-111b14.5 si:dkey-111b14.5 10 1 - - 1.000 - - - - - -
7. CRISP3 CRISP3 0 1 - - 1.000 - - - - - -
8. U12 U12 14 1 - - - - 1.000 - - - -
9. ntng1a ENSDARG00000014973 23 1 1.000 - - - - - - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
10. cd22 ENSDARG00000053005 3 1 1.000 - - - - - - - - cd22 molecule [Source:ZFIN;Acc:ZDB-GENE-050522-521]
11. si:ch211-266a5.12 ENSDARG00000092714 10 1 - - - - 1.000 - - - - si:ch211-266a5.12 [Source:ZFIN;Acc:ZDB-GENE-081104-210]
12. asic4a ENSDARG00000025162 25 1 - - - - 1.000 - - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
13. si:ch211-73m21.2 si:ch211-73m21.2 5 1 - - - - 1.000 - - - -
14. dnah9 ENSDARG00000103383 2 1 - - - - 1.000 - - - - dynein, axonemal, heavy chain 9 [Source:ZFIN;Acc:ZDB-GENE-020925-1]
15. CABZ01117474.1 CABZ01117474.1 2 1 1.000 - - - - - - - -
16. ptk2ba ENSDARG00000022841 19 1 1.000 - - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
17. si:dkeyp-80d11.4 ENSDARG00000103254 13 1 - - - - 1.000 - - - - si:dkeyp-80d11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-184]
18. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - 1.000 - - - -
19. tlr8b ENSDARG00000073675 0 1 - - - - 1.000 - - - - toll-like receptor 8b [Source:ZFIN;Acc:ZDB-GENE-040219-12]
20. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
21. cldn15lb ENSDARG00000100844 46 1 1.000 - - - - - - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
22. mhc1zaa_2 ENSDARG00000092162 0 1 - - 1.000 - - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
23. helq ENSDARG00000079818 133 1 1.000 - - - - - - - - helicase, POLQ like [Source:ZFIN;Acc:ZDB-GENE-060503-421]
24. ZNF337_7 ZNF337_7 198 1 1.000 - - - - - - - -
25. tbkbp1 ENSDARG00000061473 24 1 1.000 - - - - - - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
26. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
27. MDFI ENSDARG00000089564 8 1 - - - - 1.000 - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
28. EMB ENSDARG00000059485 35 1 1.000 - - - - - - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
29. si:dkey-47k20.1 ENSDARG00000092523 2 1 - - - - 1.000 - - - - si:dkey-47k20.1 [Source:ZFIN;Acc:ZDB-GENE-060503-641]
30. AL935200.4 AL935200.4 3 1 - - - - 1.000 - - - -
31. NPDC1 NPDC1 126 1 1.000 - - - - - - - -
32. si:dkey-13n15.11 ENSDARG00000078002 8 1 - - - - 1.000 - - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
33. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
34. slc44a5a ENSDARG00000017398 5 1 - - - - 1.000 - - - - solute carrier family 44, member 5a [Source:ZFIN;Acc:ZDB-GENE-070705-333]
35. si:ch211-218d20.10 si:ch211-218d20.10 4 1 1.000 - - - - - - - -
36. gprc6a ENSDARG00000005371 7 1 - - 1.000 - - - - - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
37. lmx1a ENSDARG00000020354 111 1 1.000 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
38. rsph4a ENSDARG00000067606 132 1 1.000 - - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
39. zgc:173711 zgc:173711 2 1 - - 1.000 - - - - - -
40. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - 1.000 - - - - - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
41. nphs1 ENSDARG00000060758 5 1 - - - - 1.000 - - - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
42. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 1.000 - - - - - - - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
43. dcp2_1 ENSDARG00000104242 74 1 1.000 - - - - - - - - decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
44. AL929276.1 ENSDARG00000113065 0 1 - - - - 1.000 - - - -
45. si:ch211-80j13.1 si:ch211-80j13.1 2 1 - - - - 1.000 - - - -
46. serinc2l ENSDARG00000053425 5 1 1.000 - - - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
47. mpeg1 mpeg1 123 1 - - - - 1.000 - - - -
48. si:rp71-1h20.5 ENSDARG00000098176 3 1 - - 1.000 - - - - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
49. CR352328.3 CR352328.3 9 1 1.000 - - - - - - - -
50. ECT2L 39 1 1.000 - - - - - - - - epithelial cell transforming 2 like, transcript variant X4
51. prelp ENSDARG00000070597 99 1 - - 1.000 - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
52. ydjc ENSDARG00000062655 5 1 1.000 - - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
53. cpa1 ENSDARG00000030915 0 1 - - - - 1.000 - - - - carboxypeptidase A1 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-050522-438]
54. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1 1.000 - - - - - - - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
55. CU638737.1 CU638737.1 17 1 - - - - 1.000 - - - -
56. si:dkey-15h8.14 si:dkey-15h8.14 139 1 1.000 - - - - - - - -
57. CU570800.3 ENSDARG00000109285 0 1 - - - - 1.000 - - - -
58. si:dkey-25o1.4 si:dkey-25o1.4 1 1 - - - - 1.000 - - - -
59. KCNA2_1 KCNA2_1 15 1 - - - - 1.000 - - - -
60. radil ENSDARG00000079779 14 1 - - - - 1.000 - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
61. U6_13 U6_13 0 1 - - 1.000 - - - - - -
62. CR382372.2 CR382372.2 136 1 1.000 - - - - - - - -
63. CCSAP CCSAP 147 1 1.000 - - - - - - - -
64. tbc1d9 ENSDARG00000043627, ENSDARG00000059900 3 1 1.000 - - - - - - - - TBC1 domain family, member 9 (with GRAM domain) [Source:ZFIN;Acc:ZDB-GENE-060810-33]
65. VWDE_1 VWDE_1 2 1 - - - - 1.000 - - - -
66. SYPL1 ENSDARG00000077356 1 1 - - - - 1.000 - - - - synaptophysin-like 1 [Source:ZFIN;Acc:ZDB-GENE-110420-2]
67. BX470224.1 ENSDARG00000092793 22 1 - - - - 1.000 - - - -
68. PTCHD2 PTCHD2 2 1 1.000 - - - - - - - -
69. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - - - 1.000 - - - -
70. CDH7 16 1 1.000 - - - - - - - - cadherin 7, type 2, transcript variant X1
71. RP1 ENSDARG00000077687 6 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
72. DUSP19 DUSP19 10 1 1.000 - - - - - - - -
73. CABZ01074946.1 CABZ01074946.1 119 1 1.000 - - - - - - - -
74. kdr ENSDARG00000017321 31 1 - - 1.000 - - - - - - kinase insert domain receptor (a type III receptor tyrosine kinase) [Source:ZFIN;Acc:ZDB-GENE-041001-112]
75. si:dkey-203o21.2 si:dkey-203o21.2 0 1 - - - - 1.000 - - - -
76. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 1 - - - - 1.000 - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
77. zgc:112958 zgc:112958 5 1 - - - - 1.000 - - - -
78. nfixb ENSDARG00000061836 7 1 1.000 - - - - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
79. PLXNA1 PLXNA1 2 1 1.000 - - - - - - - -
80. SEC14L5 SEC14L5 1 1 - - 1.000 - - - - - -
81. rimbp2 ENSDARG00000001154, ENSDARG00000093752 1 1 1.000 - - - - - - - - RIMS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040724-96]
82. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - 1.000 - - - - - -
83. zgc:194418 ENSDARG00000111790 1 1 - - - - 1.000 - - - - zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
84. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
85. si:ch73-280o22.2 ENSDARG00000077072 67 1 1.000 - - - - - - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
86. GSTK1 ENSDARG00000056510 14 1 - - 1.000 - - - - - - glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298]
87. si:dkey-20i20.3 ENSDARG00000092246 4 1 - - 1.000 - - - - - - si:dkey-20i20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-623]
88. si:ch211-163b2.4 ENSDARG00000094890 140 1 1.000 - - - - - - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
89. SNORA16 SNORA16 0 1 - - - - 1.000 - - - -
90. si:ch211-117m20.4 ENSDARG00000094286 7 1 1.000 - - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
91. got1 ENSDARG00000039093 1 1 1.000 - - - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
92. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
93. zgc:114037_2 11 1 1.000 - - - - - - - - zgc:114037
94. aldh2.2_1 ENSDARG00000028087 279 1 1.000 - - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
95. GPR32_1 GPR32_1 9 1 - - 1.000 - - - - - -
96. dnah7 ENSDARG00000060165 21 1 1.000 - - - - - - - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
97. Telomerase-vert Telomerase-vert 8 1 1.000 - - - - - - - -
98. spry1 ENSDARG00000103985 0 1 - - 1.000 - - - - - - sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
99. VTCN1 ENSDARG00000078643 0 1 - - - - 1.000 - - - - V-set domain containing T cell activation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-070912-388]
100. rom1b ENSDARG00000026926 4 1 - - 1.000 - - - - - - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]

There are 558 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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