Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3RF3

Gene Name Gene ID Reads Annotation
SH3RF3 ENSDARG00000102334 1 SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]










Genes with expression patterns similar to SH3RF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3RF3 ENSDARG00000102334 1 3 1.000 - 1.000 - 1.000 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
2. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 2 1.000 - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
3. fubp3 ENSDARG00000086896 21 1.938 1.000 - 0.938 - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
4. tdo2b ENSDARG00000023176 8 1.806 1.000 - - - 0.806 - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
5. si:dkey-111b14.5 si:dkey-111b14.5 10 1 - - 1.000 - - - - - -
6. crispld1a ENSDARG00000077275 7 1 1.000 - - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
7. si:ch73-223d24.4 si:ch73-223d24.4 5 1 - - 1.000 - - - - - -
8. zgc:171500 ENSDARG00000071553 2 1 - - 1.000 - - - - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
9. si:ch211-28e16.5 ENSDARG00000093376 2 1 - - - - 1.000 - - - - si:ch211-28e16.5 [Source:ZFIN;Acc:ZDB-GENE-090313-111]
10. BX324142.2 ENSDARG00000117006 1 1 - - - - 1.000 - - - -
11. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - 1.000 - - - - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
12. CU638737.1 CU638737.1 17 1 - - - - 1.000 - - - -
13. cacng8a ENSDARG00000020450 32 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
14. si:ch211-286e11.3 si:ch211-286e11.3 20 1 1.000 - - - - - - - -
15. BX548011.3 ENSDARG00000113526 2 1 - - - - 1.000 - - - -
16. ZNF337_7 ZNF337_7 198 1 1.000 - - - - - - - -
17. VOPP1_1 VOPP1_1 73 1 1.000 - - - - - - - -
18. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 1.000 - - - - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
19. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - - - 1.000 - - - -
20. zgc:113307 ENSDARG00000044894 17 1 - - - - 1.000 - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
21. lmx1a ENSDARG00000020354 111 1 1.000 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
22. si:dkey-70n11.1 si:dkey-70n11.1 2 1 - - 1.000 - - - - - -
23. ZAN ZAN 11 1 - - - - 1.000 - - - -
24. si:ch73-44m9.1 ENSDARG00000077115 3 1 1.000 - - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
25. nitr1i ENSDARG00000033963 0 1 - - - - 1.000 - - - - novel immune-type receptor 1i [Source:ZFIN;Acc:ZDB-GENE-001106-3]
26. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - 1.000 - - - - - -
27. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
28. rhbdd3 ENSDARG00000079816 2 1 1.000 - - - - - - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
29. psmb8 psmb8 0 1 - - - - 1.000 - - - -
30. GRIK3 ENSDARG00000077715 178 1 1.000 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
31. CR759920.2 CR759920.2 1 1 - - - - 1.000 - - - -
32. Metazoa_SRP_27 Metazoa_SRP_27 2 1 - - 1.000 - - - - - -
33. si:ch211-80j13.1 si:ch211-80j13.1 2 1 - - - - 1.000 - - - -
34. CABZ01090975.1 CABZ01090975.1 9 1 - - 1.000 - - - - - -
35. CABZ01117474.1 CABZ01117474.1 2 1 1.000 - - - - - - - -
36. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 1.000 - - - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
37. LIX1 ENSDARG00000052154 9 1 - - 1.000 - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
38. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
39. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
40. radil ENSDARG00000079779 14 1 - - - - 1.000 - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
41. C20H2orf71 C20H2orf71 2 1 - - - - 1.000 - - - -
42. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
43. ptk2ba ENSDARG00000022841 19 1 1.000 - - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
44. smpdl3a ENSDARG00000053119 1 1 - - - - 1.000 - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
45. cd79b ENSDARG00000104691 5 1 - - - - 1.000 - - - - CD79b molecule, immunoglobulin-associated beta [Source:ZFIN;Acc:ZDB-GENE-121219-1]
46. CR759816.1 ENSDARG00000098977 27 1 - - - - 1.000 - - - -
47. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1 1.000 - - - - - - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
48. cyp2p9 ENSDARG00000022631 1 1 - - - - 1.000 - - - - cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
49. wdr27_1 ENSDARG00000053386 1 1 1.000 - - - - - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
50. PPHLN1 ENSDARG00000045692 4 1 - - - - 1.000 - - - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
51. chrm2a ENSDARG00000098612 5 1 - - 1.000 - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
52. si:dkey-246e1.1_1 si:dkey-246e1.1_1 0 1 - - 1.000 - - - - - -
53. s1pr5b ENSDARG00000052192 52 1 - - 1.000 - - - - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
54. si:ch211-117m20.4 ENSDARG00000094286 7 1 1.000 - - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
55. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
56. LRRK1 ENSDARG00000007398 2 1 - - - - 1.000 - - - - leucine-rich repeat kinase 1 [Source:ZFIN;Acc:ZDB-GENE-101019-2]
57. tbkbp1 ENSDARG00000061473 24 1 1.000 - - - - - - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
58. si:ch211-239f4.4 si:ch211-239f4.4 12 1 1.000 - - - - - - - -
59. si:dkey-188i13.7 ENSDARG00000078389 81 1 - - - - 1.000 - - - - si:dkey-188i13.7 [Source:ZFIN;Acc:ZDB-GENE-090312-190]
60. si:dkeyp-73d8.6 ENSDARG00000079589 1 1 - - - - 1.000 - - - - si:dkeyp-73d8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-683]
61. VTCN1 ENSDARG00000078643 0 1 - - - - 1.000 - - - - V-set domain containing T cell activation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-070912-388]
62. PROC PROC 11 1 - - 1.000 - - - - - -
63. myrip ENSDARG00000038814 103 1 1.000 - - - - - - - - myosin VIIA and Rab interacting protein [Source:ZFIN;Acc:ZDB-GENE-080123-1]
64. si:zfos-1697h8.2 si:zfos-1697h8.2 0 1 - - 1.000 - - - - - -
65. efemp2b_1 ENSDARG00000020811 77 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
66. ablim1a ENSDARG00000060149 228 1 1.000 - - - - - - - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
67. si:dkey-233e3.6 si:dkey-233e3.6 1 1 1.000 - - - - - - - -
68. CABZ01071058.1 CABZ01071058.1 4 1 - - 1.000 - - - - - -
69. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
70. dre-mir-429b ENSDARG00000082968 212 1 1.000 - - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
71. zgc:112958 zgc:112958 5 1 - - - - 1.000 - - - -
72. si:ch211-190k17.31 si:ch211-190k17.31 29 1 1.000 - - - - - - - -
73. nphs2 ENSDARG00000042850 31 1 - - - - 1.000 - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
74. si:dkey-156k2.8 ENSDARG00000087743 0 1 - - - - 1.000 - - - - si:dkey-156k2.8 [Source:ZFIN;Acc:ZDB-GENE-110914-111]
75. si:ch73-115f13.1 si:ch73-115f13.1 15 1 1.000 - - - - - - - -
76. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - 1.000 - - - -
77. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - - 1.000 - - - -
78. CR387932.2 CR387932.2 3 1 - - - - 1.000 - - - -
79. NLRP1 NLRP1 54 1 1.000 - - - - - - - -
80. SYPL1 ENSDARG00000077356 1 1 - - - - 1.000 - - - - synaptophysin-like 1 [Source:ZFIN;Acc:ZDB-GENE-110420-2]
81. celsr3 ENSDARG00000055825 1 1 - - - - 1.000 - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]
82. si:zfos-2548d7.1 si:zfos-2548d7.1 3 1 - - - - 1.000 - - - -
83. zzef1 ENSDARG00000094380 4 1 - - - - 1.000 - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
84. si:dkey-246j6.2 si:dkey-246j6.2 0 1 - - 1.000 - - - - - -
85. sirt7 ENSDARG00000060645 1 1 - - - - 1.000 - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
86. GRM5_1 GRM5_1 18 1 1.000 - - - - - - - -
87. si:dkey-56d12.4 ENSDARG00000070845 2 1 - - - - 1.000 - - - - si:dkey-56d12.4 [Source:ZFIN;Acc:ZDB-GENE-060531-147]
88. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
89. large 9 1 - - 1.000 - - - - - - like-glycosyltransferase, transcript variant X1
90. FAM13C FAM13C 1 1 - - - - 1.000 - - - -
91. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
92. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
93. si:rp71-10g3.1 si:rp71-10g3.1 6 1 - - - - 1.000 - - - -
94. PATL2 PATL2 10 1 - - - - 1.000 - - - -
95. si:dkey-148b12.4 si:dkey-148b12.4 2 1 - - - - 1.000 - - - -
96. sycp2 ENSDARG00000088950 3 1 1.000 - - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
97. si:dkey-15h8.14 si:dkey-15h8.14 139 1 1.000 - - - - - - - -
98. zgc:172109 zgc:172109 0 1 - - - - 1.000 - - - -
99. ARHGAP6 33 1 1.000 - - - - - - - - Rho GTPase activating protein 6
100. BX601644.1 ENSDARG00000090632 2 1 - - - - 1.000 - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]

There are 558 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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