Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SH3RF2

Gene Name Gene ID Reads Annotation
SH3RF2 ENSDARG00000101178 0 SH3 domain containing ring finger 2 [Source:ZFIN;Acc:ZDB-GENE-141212-301]










Genes with expression patterns similar to SH3RF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. loxhd1a ENSDARG00000094738 7 1 - - - - - - 1.000 - - lipoxygenase homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-091112-20]
2. zgc:195170 ENSDARG00000076264 3 1 - - - - - - 1.000 - - zgc:195170 [Source:ZFIN;Acc:ZDB-GENE-080723-62]
3. CU855899.1 CU855899.1 2 1 - - - - - - 1.000 - -
4. plac8.1 ENSDARG00000043729 1 1 - - - - - - 1.000 - - placenta-specific 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050809-124]
5. rxfp3.2a 11 1 - - - - - - 1.000 - - relaxin/insulin-like family peptide receptor 3.2a
6. si:dkey-263b2.2 si:dkey-263b2.2 1 1 - - - - - - 1.000 - -
7. SH3RF2 ENSDARG00000101178 0 1 - - - - - - 1.000 - - SH3 domain containing ring finger 2 [Source:ZFIN;Acc:ZDB-GENE-141212-301]
8. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - - - - - 1.000 - - si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
9. C1GALT1_1 C1GALT1_1 1 1 - - - - - - 1.000 - -
10. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 - - - - - - 1.000 - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
11. cd8a ENSDARG00000044797 7 1 - - - - - - 1.000 - - CD8a molecule [Source:ZFIN;Acc:ZDB-GENE-060210-2]
12. si:ch211-278p7.5 si:ch211-278p7.5 0 1 - - - - - - 1.000 - -
13. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - - 1.000 - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
14. SH2D1B SH2D1B 60 1 - - - - - - 1.000 - -
15. rbbp9 ENSDARG00000040713 12 1 - - - - - - 1.000 - - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
16. si:rp71-40n14.1 si:rp71-40n14.1 0 1 - - - - - - 1.000 - -
17. klhl6 ENSDARG00000026990 24 1 - - - - - - 1.000 - - kelch-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-030616-325]
18. BX005082.1 ENSDARG00000098558 2 1 - - - - - - 1.000 - -
19. zzef1 ENSDARG00000094380 4 1 - - - - - - 1.000 - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
20. ms4a17a.6 ENSDARG00000007018 6 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.6 [Source:ZFIN;Acc:ZDB-GENE-070209-265]
21. BAIAP3 ENSDARG00000079264 31 1 - - - - - - 1.000 - - BAI1-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-130530-863]
22. gatsl3 7 1 - - - - - - 1.000 - - GATS protein-like 3
23. ccdc41 ccdc41 97 1 - - - - - - 1.000 - -
24. CU302436.3 CU302436.3 174 1 - - - - - - 1.000 - -
25. si:dkey-157e10.7 si:dkey-157e10.7 105 1 - - - - - - 1.000 - -
26. CR356223.1 ENSDARG00000093865 1 1 - - - - - - 1.000 - -
27. cgrrf1 ENSDARG00000037040, ENSDARG00000109850, ENSDARG00000110308 50 1 - - - - - - 1.000 - - cell growth regulator with ring finger domain 1 [Source:ZFIN;Acc:ZDB-GENE-040724-100]
28. si:dkey-80c24.5 ENSDARG00000092501 6 1 - - - - - - 1.000 - - si:dkey-80c24.5 [Source:ZFIN;Acc:ZDB-GENE-061207-73]
29. zgc:110053 zgc:110053 69 1 - - - - - - 1.000 - -
30. TP53I3 60 1 - - - - - - 1.000 - - tumor protein p53 inducible protein 3, transcript variant X1
31. zgc:194252 ENSDARG00000057142 11 1 - - - - - - 1.000 - - zgc:194252 [Source:ZFIN;Acc:ZDB-GENE-081022-86]
32. CU856140.1 CU856140.1 4316 1 - - - - - - 1.000 - -
33. LAMTOR1 ENSDARG00000076464 27 1 - - - - - - 1.000 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 [Source:ZFIN;Acc:ZDB-GENE-130819-1]
34. lft1 ENSDARG00000019920 66 1 - - - - - - 1.000 - - lefty1 [Source:ZFIN;Acc:ZDB-GENE-990630-10]
35. si:dkey-228i19.32 si:dkey-228i19.32 9 1 - - - - - - 1.000 - -
36. C11H3orf14 C11H3orf14 15 1 - - - - - - 1.000 - -
37. ros1 ENSDARG00000087197 9 1 - - - - - - 1.000 - - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
38. rs1 rs1 70 1 - - - - - - 1.000 - -
39. BX664622.2 BX664622.2 1 1 - - - - - - 1.000 - -
40. mgrn1b ENSDARG00000004796 18 1 - - - - - - 1.000 - - mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]
41. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - - - - - - 1.000 - -
42. AHSG AHSG 3 1 - - - - - - 1.000 - -
43. SUSD1 ENSDARG00000058839 4 1 - - - - - - 1.000 - - sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]
44. si:dkey-27j5.5 ENSDARG00000026383 6 1 - - - - - - 1.000 - - si:dkey-27j5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-264]
45. plce1 ENSDARG00000087921 44 1 - - - - - - 1.000 - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
46. FP325123.1_1 ENSDARG00000105359 38 1 - - - - - - 1.000 - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
47. hydin ENSDARG00000056764, ENSDARG00000114934 16 1 - - - - - - 1.000 - - HYDIN, axonemal central pair apparatus protein [Source:ZFIN;Acc:ZDB-GENE-050419-219]
48. CYTH4 CYTH4 2 1 - - - - - - 1.000 - -
49. PSMB11_1 PSMB11_1 2 1 - - - - - - 1.000 - -
50. kcnh4 kcnh4 6 1 - - - - - - 1.000 - -
51. CR847543.1 ENSDARG00000086708 155 1 - - - - - - 1.000 - -
52. aanat2 ENSDARG00000079802 175 1 - - - - - - 1.000 - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
53. fgl2 fgl2 9 1 - - - - - - 1.000 - -
54. CKMT2 CKMT2 10 1 - - - - - - 1.000 - -
55. CR847844.5 CR847844.5 5 1 - - - - - - 1.000 - -
56. BX323793.3 BX323793.3 7 1 - - - - - - 1.000 - -
57. si:ch211-10j20.2 si:ch211-10j20.2 0 1 - - - - - - 1.000 - -
58. B2M ENSDARG00000053136 2 1 - - - - - - 1.000 - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
59. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - - 1.000 - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
60. BX005421.5 BX005421.5 0 1 - - - - - - 1.000 - -
61. si:dkey-4i23.7 si:dkey-4i23.7 19 1 - - - - - - 1.000 - -
62. si:dkey-9i5.4 si:dkey-9i5.4 14 1 - - - - - - 1.000 - -
63. DOK2 ENSDARG00000075818 8 1 - - - - - - 1.000 - - docking protein 2 [Source:ZFIN;Acc:ZDB-GENE-080721-4]
64. arhgef6 ENSDARG00000006683 59 1 - - - - - - 1.000 - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-101013-2]
65. ENSDARG00000088134 ENSDARG00000088134 16 1 - - - - - - 1.000 - -
66. si:dkey-91f15.8 18 1 - - - - - - 1.000 - - si:dkey-91f15.8, transcript variant X1
67. pofut2 ENSDARG00000045175 6 1 - - - - - - 1.000 - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
68. si:ch211-176g6.2 ENSDARG00000079791 4 1 - - - - - - 1.000 - - si:ch211-176g6.2 [Source:ZFIN;Acc:ZDB-GENE-121214-224]
69. si:dkey-10g2.5 si:dkey-10g2.5 72 1 - - - - - - 1.000 - -
70. slc4a4b ENSDARG00000044808 9 1 - - - - - - 1.000 - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
71. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - - - - - - 1.000 - -
72. cdhr1a ENSDARG00000004643 7 1 - - - - - - 1.000 - - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
73. mir430c-2 2 1 - - - - - - 1.000 - - microRNA 430c-2
74. gbp3 ENSDARG00000003244 90 1 - - - - - - 1.000 - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
75. 5S_rRNA_25 5S_rRNA_25 0 1 - - - - - - 1.000 - -
76. tagapa ENSDARG00000002353 20 1 - - - - - - 1.000 - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
77. RBBP6_6 RBBP6_6 1 1 - - - - - - 1.000 - -
78. si:dkey-119g10.5 si:dkey-119g10.5 1 1 - - - - - - 1.000 - -
79. npnt ENSDARG00000018721 19 1 - - - - - - 1.000 - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
80. psme2 ENSDARG00000033144 3 1 - - - - - - 1.000 - - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
81. zgc:175284 ENSDARG00000078159 29 1 - - - - - - 1.000 - - zgc:175284 [Source:ZFIN;Acc:ZDB-GENE-080219-49]
82. KCTD20 6 1 - - - - - - 1.000 - - potassium channel tetramerization domain containing 20, transcript variant X2
83. si:dkeyp-85d8.4 si:dkeyp-85d8.4 1 1 - - - - - - 1.000 - -
84. prox1b ENSDARG00000088810, ENSDARG00000113014 33 1 - - - - - - 1.000 - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
85. si:ch211-263m18.4 ENSDARG00000093353 27 1 - - - - - - 1.000 - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
86. KLHL10 KLHL10 1 1 - - - - - - 1.000 - -
87. mir15a-1 36 1 - - - - - - 1.000 - - microRNA 15a-1
88. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - - - 1.000 - -
89. BX569789.2 BX569789.2 12 1 - - - - - - 1.000 - -
90. si:ch211-141e20.6 si:ch211-141e20.6 25 1 - - - - - - 1.000 - -
91. si:ch211-57m13.7 ENSDARG00000092740 0 1 - - - - - - 1.000 - - si:ch211-57m13.7 [Source:ZFIN;Acc:ZDB-GENE-110411-107]
92. TRAF2 TRAF2 13 1 - - - - - - 1.000 - -
93. fosl1a ENSDARG00000015355 139 1 - - - - - - 1.000 - - FOS-like antigen 1a [Source:ZFIN;Acc:ZDB-GENE-061207-7]
94. dync1i2a ENSDARG00000078386 53 1 - - - - - - 1.000 - - dynein, cytoplasmic 1, intermediate chain 2a [Source:ZFIN;Acc:ZDB-GENE-060929-1086]
95. CABZ01072557.1 CABZ01072557.1 9 1 - - - - - - 1.000 - -
96. si:dkey-226m8.9 si:dkey-226m8.9 4 1 - - - - - - 1.000 - -
97. NWD1 ENSDARG00000076110 3 1 - - - - - - 1.000 - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
98. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1 - - - - - - 1.000 - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
99. si:dkey-26g8.5 ENSDARG00000089750 7070 1 - - - - - - 1.000 - - si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
100. pde5ab ENSDARG00000051915 18 1 - - - - - - 1.000 - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]

There are 184 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA