Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3RF1

Gene Name Gene ID Reads Annotation
SH3RF1 ENSGALG00000009692 46 SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]











Genes with expression patterns similar to SH3RF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SH3RF1 ENSGALG00000009692 46 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
2. COMMD6 ENSGALG00000016922 24 1.799 - - - - 0.943 - - - - 0.856 COMM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24015]
3. ENSGALG00000002020 ENSGALG00000002020 183 1.793 - - - - - 0.858 - - - 0.935
4. RAB44 ENSGALG00000000544 6 1.737 - - - - - 0.773 - 0.964 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
5. CENPQ ENSGALG00000016692 293 1.71 - - 0.826 - - - - - - 0.884 centromere protein Q [Source:NCBI gene;Acc:422048]
6. JADE1 ENSGALG00000010214 51 1.61 - - - - 0.708 - - 0.902 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
7. FGL2 ENSGALG00000008306 15 1.605 - - - - - 0.766 0.839 - - - fibrinogen like 2 [Source:NCBI gene;Acc:768821]
8. ZP2 ENSGALG00000002428 10 1.595 - - 0.743 - - - - 0.852 - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
9. SLC8B1 ENSGALG00000008337 42 1.558 - - - - 0.807 - 0.751 - - - solute carrier family 8 member B1 [Source:HGNC Symbol;Acc:HGNC:26175]
10. HTR7_1 ENSGALG00000040549 86 1.495 - - - - - 0.775 - - - 0.720 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
11. SP2 ENSGALG00000000233 43 1.454 - - 0.710 - - - - 0.744 - - Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
12. DENND6B ENSGALG00000043771 22 1.448 - - 0.743 - - - - 0.705 - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
13. ELOVL3 ENSGALG00000025772 212 1 - - - - - - - 1.000 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
14. IL13RA2 ENSGALG00000020316 22 1 - - - - - - - 1.000 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
15. DNAJB5 ENSGALG00000001918 81 1 - - - - - - - 1.000 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
16. SNORA19 SNORA19 70 1 - - - - - - - 1.000 - -
17. PSTPIP1 ENSGALG00000002786 9 0.983 - - - - - - - - - 0.983 proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
18. CNTNAP4 ENSGALG00000023179 13 0.983 - - - - - - - - - 0.983 contactin associated protein like 4
19. SIDT1 ENSGALG00000014812 20 0.983 - - - - - - - - - 0.983 SID1 transmembrane family member 1 [Source:HGNC Symbol;Acc:HGNC:25967]
20. DRAM1 ENSGALG00000012761 53 0.983 - - - - - - - - - 0.983 DNA damage regulated autophagy modulator 1 [Source:HGNC Symbol;Acc:HGNC:25645]
21. DSTYK ENSGALG00000041123 12 0.983 - - - - - - - - - 0.983 dual serine/threonine and tyrosine protein kinase [Source:NCBI gene;Acc:395171]
22. CCR4 ENSGALG00000039146 20 0.983 - - - - - - - - - 0.983 C-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1605]
23. NAGPA 5 0.983 - - - - - - - - - 0.983 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, transcript variant X5
24. TRH ENSGALG00000008490 16 0.983 - - - - - - - - - 0.983 thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
25. ISOC1 ENSGALG00000000161 46 0.979 - - - - - - - - - 0.979 isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
26. ARL15 ENSGALG00000014911 13 0.978 - - - - - - - - - 0.978 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
27. ENSGALG00000026925 ENSGALG00000026925 119 0.977 - - - - - - - - - 0.977
28. MUC6 ENSGALG00000040530 11 0.977 - - - - - - - - - 0.977 mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
29. PNMT ENSGALG00000027281 14 0.972 - - - - - - - - - 0.972 phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
30. CXorf30 CXorf30 172 0.971 - - - - - - - - - 0.971
31. CKMT2 ENSGALG00000015602 46 0.967 - - - - - - - 0.967 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
32. SNTG2 ENSGALG00000016367 42 0.967 - - - - - - - - - 0.967 syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
33. IKBIP ENSGALG00000026284 31 0.966 - - - - - - - - - 0.966 IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
34. PCDH12 ENSGALG00000002544 36 0.966 - - - - - - - - - 0.966 protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
35. FBXL4 ENSGALG00000015490 12 0.966 - - - - - - - - - 0.966 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
36. ENSGALG00000020700 ENSGALG00000020700 44 0.965 - - - - - - - - - 0.965
37. GPM6A ENSGALG00000043480 2133 0.964 - - - - - - - 0.964 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
38. TRIM27.1 ENSGALG00000030397 19 0.964 - - - - - - - 0.964 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
39. CDK19 ENSGALG00000015051 26 0.964 - - - - - - - 0.964 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
40. PKDCCB ENSGALG00000011166 74 0.964 - - - - - - - 0.964 - - protein kinase domain containing, cytoplasmic b
41. MOCS1 ENSGALG00000010051 70 0.964 - - - - - - - - - 0.964 molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
42. IGHMBP2 ENSGALG00000004328 118 0.964 - - - - - - - 0.964 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
43. ENSGALG00000001137 ENSGALG00000001137 0 0.964 - - - - - - - 0.964 - -
44. TIGD3 TIGD3 36 0.964 - - - - - - - 0.964 - -
45. SLC22A13 ENSGALG00000005934 8 0.964 - - - - - - - 0.964 - - solute carrier family 22 member 13
46. GPR114 GPR114 46 0.964 - - - - - - - 0.964 - -
47. SAMD11 ENSGALG00000034453 43 0.964 - - - - - - - 0.964 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
48. GRIK4 ENSGALG00000006638 22 0.964 - - - - - - - 0.964 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
49. DPYS ENSGALG00000039011 54 0.962 - - - - - - - - - 0.962 dihydropyrimidinase [Source:NCBI gene;Acc:420266]
50. SAPCD2 12 0.961 - - - - - - - - - 0.961 suppressor APC domain containing 2, transcript variant X1
51. ENSGALG00000016601 ENSGALG00000016601 16 0.958 - - - - - - - - - 0.958
52. ATHL1 ATHL1 16 0.956 - - - - - - - - - 0.956
53. RAB2A ENSGALG00000015450 990 0.953 - - - - - - - - - 0.953 RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
54. AZI2 ENSGALG00000011428 24 0.944 - - - - - - - - - 0.944 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:HGNC:24002]
55. LRRTM3 ENSGALG00000002864 29 0.943 - - - - 0.943 - - - - - leucine rich repeat transmembrane neuronal 3 [Source:NCBI gene;Acc:423649]
56. MAPK10 ENSGALG00000011109 16 0.943 - - - - 0.943 - - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
57. ANKMY1 ENSGALG00000033920 12 0.943 - - - - 0.943 - - - - - ankyrin repeat and MYND domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20987]
58. MAPK11 ENSGALG00000040023 15 0.943 - - - - 0.943 - - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
59. ERC2 ENSGALG00000005419 24 0.943 - - - - 0.943 - - - - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
60. TNIP2 ENSGALG00000015666 28 0.943 - - - - 0.943 - - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
61. ENSGALG00000007003 ENSGALG00000007003 2 0.943 - - - - 0.943 - - - - -
62. DGKI ENSGALG00000012890 3 0.943 - - - - 0.943 - - - - - diacylglycerol kinase iota [Source:HGNC Symbol;Acc:HGNC:2855]
63. GLTSCR1L 18 0.943 - - - - 0.943 - - - - - GLTSCR1 like, transcript variant X4
64. ENSGALG00000012332 ENSGALG00000012332 71 0.943 - - - - 0.943 - - - - -
65. CNIH3 ENSGALG00000009308 2 0.943 - - - - 0.943 - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:HGNC Symbol;Acc:HGNC:26802]
66. DRD2 ENSGALG00000007794 399 0.943 - - - - - - - - - 0.943 dopamine receptor D2 [Source:NCBI gene;Acc:428252]
67. SIX1 ENSGALG00000029401 526 0.942 - - - - - - - 0.942 - - SIX homeobox 1 [Source:NCBI gene;Acc:693262]
68. CABP2 ENSGALG00000037497 329 0.942 - - - - - - - 0.942 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
69. ZDHHC20 ENSGALG00000017126 58 0.94 - - - - - - - - - 0.940 zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
70. QSOX1 ENSGALG00000003933 184 0.936 - - - - - - - - - 0.936 quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
71. HOXD12 ENSGALG00000009274 637 0.93 - - - - - - - 0.930 - - homeobox D12 [Source:NCBI gene;Acc:396178]
72. EFNA5 ENSGALG00000000280 308 0.924 - - - - - - - - - 0.924 ephrin A5 [Source:NCBI gene;Acc:396100]
73. C5 ENSGALG00000001565 142 0.924 - - - - - - - - - 0.924 complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
74. RNASET2 ENSGALG00000011426 40 0.921 - - - - - - - - - 0.921 ribonuclease T2 [Source:NCBI gene;Acc:421569]
75. PCSK1 ENSGALG00000014681 73 0.921 - - - - - - - - - 0.921 proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:HGNC:8743]
76. PCDH19 ENSGALG00000006822 13 0.92 - - - - - 0.920 - - - - protocadherin 19 [Source:NCBI gene;Acc:422263]
77. EXTL2 ENSGALG00000027984 808 0.914 - - - - - - - - - 0.914 exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
78. RAB3B ENSGALG00000010567 894 0.914 - - - - - - - - - 0.914 RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
79. ENPP3 ENSGALG00000037587 25 0.914 - - - - - 0.914 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
80. RFXAP ENSGALG00000019087 37 0.912 - - - - - - - - - 0.912 regulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]
81. TRERF1 ENSGALG00000009896 42 0.911 - - - - - - - - - 0.911 transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
82. CRB2 ENSGALG00000001169 23 0.911 - - - - 0.911 - - - - - crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
83. MOCOS ENSGALG00000013149 25 0.91 - - - - - - - - - 0.910 molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
84. IFT80 ENSGALG00000009559 57 0.907 - - - - - - - - - 0.907 intraflagellar transport 80 [Source:HGNC Symbol;Acc:HGNC:29262]
85. NCALD ENSGALG00000032518 42 0.906 - - - - - - - - - 0.906 neurocalcin delta [Source:NCBI gene;Acc:396048]
86. UEVLD ENSGALG00000006342 164 0.903 - - - - - - - - - 0.903 UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
87. FAM102A ENSGALG00000005074 11 0.898 - - - - - - - 0.898 - - family with sequence similarity 102 member A [Source:NCBI gene;Acc:417228]
88. CNKSR3 ENSGALG00000027159 41 0.898 - - - - - - - 0.898 - - CNKSR family member 3, transcript variant X2
89. HSPB7L ENSGALG00000028183 795 0.894 - - - - - 0.894 - - - - heat shock protein beta-7-like
90. SNTB2 ENSGALG00000027482 44 0.893 - - - - - - - - - 0.893 syntrophin beta 2 [Source:HGNC Symbol;Acc:HGNC:11169]
91. MYOF ENSGALG00000006705 793 0.891 - - - - - - - - - 0.891 myoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
92. SLC6A6 ENSGALG00000006425 31 0.89 - - - - - - - - - 0.890 solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
93. CCDC135 CCDC135 220 0.888 - - - - - - - - - 0.888
94. KHDRBS2 ENSGALG00000016276 110 0.885 - - - - - - - - - 0.885 KH RNA binding domain containing, signal transduction associated 2 [Source:HGNC Symbol;Acc:HGNC:18114]
95. GJA10 ENSGALG00000015606 1 0.884 - - - - - 0.884 - - - - gap junction protein, alpha 10, 62kDa
96. ENSGALG00000011658 ENSGALG00000011658 1 0.884 - - - - - 0.884 - - - -
97. CCSER1 ENSGALG00000039674 14 0.884 - - - - - 0.884 - - - - coiled-coil serine rich protein 1, transcript variant X3
98. gga-mir-1647 ENSGALG00000025382 4 0.884 - - - - - 0.884 - - - - gga-mir-1647 [Source:miRBase;Acc:MI0007379]
99. XG ENSGALG00000029002 17 0.884 - - - - - 0.884 - - - - Xg blood group
100. DOLK ENSGALG00000026007 6 0.884 - - - - - 0.884 - - - - dolichol kinase [Source:NCBI gene;Acc:417199]

There are 317 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA