Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3BP2

Gene Name Gene ID Reads Annotation
SH3BP2 ENSGALG00000015665 431 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]











Genes with expression patterns similar to SH3BP2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SH3BP2 ENSGALG00000015665 431 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
2. KIDINS220 ENSGALG00000016409 854 1.664 - - 0.727 - - - - - - 0.937 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
3. SPERT ENSGALG00000016981 145 0.995 - - - - - - - - - 0.995 spermatid associated [Source:NCBI gene;Acc:418848]
4. KLC1 ENSGALG00000011528 1621 0.979 - - - - - - - - - 0.979 kinesin light chain 1, transcript variant X6
5. CUL5 ENSGALG00000017165 2480 0.969 - - - - - - - - - 0.969 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
6. ARID1B ENSGALG00000013683 3397 0.965 - - - - - - - - - 0.965 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
7. TRAPPC12 ENSGALG00000016387 2593 0.961 - - - - - - - - - 0.961 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
8. U3 U3 1604 0.953 - - - - - - - - - 0.953
9. CCNI ENSGALG00000011457 3203 0.949 - - - - - - - - - 0.949 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
10. ANKRD46 ENSGALG00000041445 3791 0.944 - - - - - - - - - 0.944 ankyrin repeat domain 46, transcript variant X1
11. SQLE ENSGALG00000036915 4172 0.942 - - - - - - - - - 0.942 squalene epoxidase [Source:NCBI gene;Acc:420335]
12. SUN1 ENSGALG00000003781 3442 0.936 - - - - - - - - - 0.936 Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
13. MTDH ENSGALG00000034050 9525 0.936 - - - - - - - - - 0.936 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
14. SPATA20 ENSGALG00000006857 3506 0.929 - - - - - - - - - 0.929 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
15. CD2AP ENSGALG00000016720 8852 0.925 - - - - - - - - - 0.925 Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
16. GTSE1 ENSGALG00000004897 2865 0.922 - - - - - - - - - 0.922 G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
17. UFD1L 12964 0.919 - - - - - - - - - 0.919 ubiquitin fusion degradation 1 like (yeast)
18. VWA9 ENSGALG00000007491 4790 0.914 - - - - - - - - - 0.914 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
19. DDX54 ENSGALG00000007490 8729 0.912 - - - - - - - - - 0.912 DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
20. CCDC66 ENSGALG00000005450 1262 0.912 - - - - - - - - - 0.912 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
21. WDR82 ENSGALG00000025904 4783 0.909 - - - - - - - - - 0.909 WD repeat domain 82 [Source:NCBI gene;Acc:415942]
22. TCF25 ENSGALG00000000129 7587 0.906 - - - - - - - - - 0.906 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
23. AIMP1 ENSGALG00000010553 17994 0.9 - - - - - - - - - 0.900 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
24. MOB3A ENSGALG00000031729 9690 0.898 - - - - - - - - - 0.898 MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
25. MFSD1 ENSGALG00000009593 3116 0.896 - - - - - - - - - 0.896 major facilitator superfamily domain containing 1 [Source:NCBI gene;Acc:425017]
26. HELLS ENSGALG00000005451 7094 0.895 - - - - - - - - - 0.895 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
27. WDR12 ENSGALG00000008470 7654 0.888 - - - - - - - - - 0.888 WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
28. C9orf89 C9orf89 3056 0.887 - - - - - - - - - 0.887
29. POLR2K ENSGALG00000036019 8962 0.886 - - - - - - - - - 0.886 RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
30. ARPC1A ENSGALG00000004693 11583 0.884 - - - - - - - - - 0.884 actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
31. MCM2 ENSGALG00000006037 13458 0.882 - - - - - - - - - 0.882 minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
32. USMG5 ENSGALG00000034645 33263 0.882 - - - - - - - - - 0.882 up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
33. CHMP4B ENSGALG00000002095 17422 0.878 - - - - - - - - - 0.878 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
34. MYO5A ENSGALG00000031987 2469 0.872 - - - - - - - - - 0.872 myosin VA [Source:NCBI gene;Acc:396237]
35. RAB12 ENSGALG00000033608 14160 0.871 - - - - - - - - - 0.871 RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
36. GPN2 ENSGALG00000027909 5204 0.87 - - - - - - - - - 0.870 GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:HGNC:25513]
37. FAM72A ENSGALG00000000791 17723 0.868 - - - - - - - - - 0.868 family with sequence similarity 72 member A, transcript variant X1
38. LMO7 ENSGALG00000016920 3809 0.868 - - - - - - - - - 0.868 LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
39. HNRNPD ENSGALG00000011184 10686 0.861 - - - - - - - - - 0.861 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
40. TRAP1 ENSGALG00000039951 11323 0.856 - - - - - - - - - 0.856 TNF receptor associated protein 1 [Source:NCBI gene;Acc:416666]
41. TXNDC12 ENSGALG00000010569 13822 0.853 - - - - - - - - - 0.853 thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
42. BRT-1 BRT-1 26083 0.853 - - - - - - - - - 0.853
43. RIPK4 ENSGALG00000040189 102 0.851 - - 0.851 - - - - - - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
44. CASP8AP2 ENSGALG00000015611 5657 0.847 - - - - - - - - - 0.847 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
45. DLD ENSGALG00000007931 11011 0.843 - - - - - - - - - 0.843 dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
46. LFNG ENSGALG00000038515 5178 0.842 - - - - - - - - - 0.842 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
47. LOC770492 ENSGALG00000027778 695 0.84 - - - - - - - - - 0.840 ras-related and estrogen-regulated growth inhibitor-like
48. WRNIP1 ENSGALG00000012856 1954 0.839 - - - - - - - - - 0.839 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
49. COMMD1 ENSGALG00000008931 12202 0.837 - - - - - - - - - 0.837 copper metabolism domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23024]
50. EAPP ENSGALG00000010007 5080 0.836 - - - - - - - - - 0.836 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
51. RALGAPB ENSGALG00000001420 5112 0.835 - - - - - - - - - 0.835 Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
52. DVL3 ENSGALG00000008414 38 0.835 - - 0.835 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
53. PRTG ENSGALG00000037336 34665 0.834 - - - - - - - - - 0.834 protogenin [Source:NCBI gene;Acc:415407]
54. USP8 ENSGALG00000005894 4499 0.832 - - - - - - - - - 0.832 ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
55. TAX1BP1 ENSGALG00000042822 7728 0.831 - - - - - - - - - 0.831 Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
56. ISCA1 ENSGALG00000012606 10342 0.83 - - - - - - - - - 0.830 iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
57. F2RL2 ENSGALG00000023379 1049 0.821 - - - - - - - - - 0.821 coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
58. CSRP2BP CSRP2BP 4679 0.818 - - - - - - - - - 0.818
59. B3GALTL B3GALTL 4128 0.814 - - - - - - - - - 0.814
60. RPF2 ENSGALG00000037087 12788 0.814 - - - - - - - - - 0.814 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
61. BTG1L ENSGALG00000004676 2293 0.813 - - - - - - - - - 0.813 protein BTG1-like
62. USP10 ENSGALG00000005674 7768 0.811 - - - - - - - - - 0.811 ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
63. TBX3 ENSGALG00000036043 2888 0.809 - - - - - - - - - 0.809 T-box 3 [Source:NCBI gene;Acc:374202]
64. ERP44 ENSGALG00000013452 5352 0.809 - - - - - - - - - 0.809 endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]
65. M6PR ENSGALG00000031681 9442 0.807 - - - - - - - - - 0.807 mannose-6-phosphate receptor, cation dependent, transcript variant X3
66. SMNDC1 ENSGALG00000008561 14415 0.803 - - - - - - - - - 0.803 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
67. SNX16 ENSGALG00000029678 1104 0.802 - - 0.802 - - - - - - - sorting nexin 16 [Source:NCBI gene;Acc:420202]
68. POLN ENSGALG00000015692 1714 0.801 - - - - - - - - - 0.801 DNA polymerase nu [Source:HGNC Symbol;Acc:HGNC:18870]
69. COX6C ENSGALG00000035996 70514 0.8 - - - - - - - - - 0.800 cytochrome c oxidase subunit 6C [Source:NCBI gene;Acc:420243]
70. HIPK3 ENSGALG00000011695 6842 0.799 - - - - - - - - - 0.799 homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
71. RAD21 ENSGALG00000029523 25658 0.796 - - - - - - - - - 0.796 RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
72. ZC4H2 ENSGALG00000042725 361 0.796 - - 0.796 - - - - - - - zinc finger C4H2-type containing, transcript variant X4
73. C3H6ORF203 ENSGALG00000015316 513 0.796 - - 0.796 - - - - - - - chromosome 3 open reading frame, human C6orf203 [Source:NCBI gene;Acc:421779]
74. EBAG9 ENSGALG00000036293 10058 0.795 - - - - - - - - - 0.795 estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
75. KIAA1551 ENSGALG00000045168 3435 0.794 - - - - - - - - - 0.794 KIAA1551, transcript variant X1
76. TMEM184C ENSGALG00000010019 7856 0.794 - - - - - - - - - 0.794 transmembrane protein 184C [Source:NCBI gene;Acc:422469]
77. DDX1 ENSGALG00000016461 15157 0.794 - - - - - - - - - 0.794 DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
78. HOXA5 ENSGALG00000025929 6231 0.793 - - - - - - - - - 0.793 homeobox A5 [Source:NCBI gene;Acc:100858404]
79. RPL26 RPL26 343071 0.792 - - - - - - - - - 0.792
80. ROMO1 ENSGALG00000027416 9560 0.792 - - - - - - - - - 0.792 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
81. POLR2B ENSGALG00000011387 4864 0.791 - - - - - - - - - 0.791 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
82. CRNKL1 ENSGALG00000008429 7280 0.79 - - - - - - - - - 0.790 crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
83. NRSN1 ENSGALG00000037811 11424 0.789 - - - - - - - - - 0.789 neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
84. SET ENSGALG00000004701 103296 0.785 - - - - - - - - - 0.785 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
85. RHOT1 ENSGALG00000003397 5149 0.782 - - - - - - - - - 0.782 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
86. MTRR ENSGALG00000039424 3197 0.779 - - 0.779 - - - - - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:HGNC:7473]
87. SNX12 ENSGALG00000005659 9503 0.779 - - - - - - - - - 0.779 sorting nexin 12 [Source:NCBI gene;Acc:428704]
88. Sep-07 Sep-07 2939 0.778 - - - - - - - - - 0.778
89. IDH2 ENSGALG00000034434 18307 0.774 - - - - - - - - - 0.774 isocitrate dehydrogenase (NADP(+)) 2, mitochondrial [Source:NCBI gene;Acc:431056]
90. ZDHHC6 ENSGALG00000008870 16575 0.772 - - - - - - - - - 0.772 zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
91. SLC39A6 ENSGALG00000013209 1754 0.771 - - - - - - - - - 0.771 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
92. SLC35B1 ENSGALG00000035057 10683 0.771 - - - - - - - - - 0.771 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
93. COPS2 ENSGALG00000000404 8980 0.77 - - - - - - - - - 0.770 COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
94. GID8 ENSGALG00000005700 3992 0.769 - - - - - - - - - 0.769 GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
95. PLXNB2 ENSGALG00000039861 338 0.768 - - 0.768 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
96. VAPB ENSGALG00000007549 15511 0.767 - - - - - - - - - 0.767 VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
97. PCDH11X ENSGALG00000006851 314 0.767 - - 0.767 - - - - - - - protocadherin 11 X-linked, transcript variant X1
98. SUV39H2 ENSGALG00000013920 4360 0.767 - - - - - - - - - 0.767 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
99. C1orf198 ENSGALG00000026600 5651 0.765 - - - - - - - - - 0.765 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
100. ANKRD16 ENSGALG00000008168 475 0.765 - - 0.765 - - - - - - - ankyrin repeat domain 16 [Source:NCBI gene;Acc:416688]

There are 89 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA