Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SH3BGRL

Gene Name Gene ID Reads Annotation
SH3BGRL ENSDARG00000058302 4525 SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]










Genes with expression patterns similar to SH3BGRL

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3BGRL ENSDARG00000058302 4525 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
2. supt16h ENSDARG00000079949 4755 3.583 - - 0.944 0.975 0.909 - - - 0.755 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
3. mapre1b ENSDARG00000002659 9119 2.873 - - 0.920 0.954 - - 0.999 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
4. itgb1b.1 ENSDARG00000053232 4721 2.705 - 0.769 0.970 - 0.966 - - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
5. eppk1 ENSDARG00000096359 4315 2.69 - 0.736 0.964 0.990 - - - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
6. plxnb1b ENSDARG00000017211 4676 2.654 - - 0.964 - 0.961 0.729 - - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
7. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 2.598 - - - 0.830 0.849 - 0.919 - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
8. TCEB3 2429 2.572 - - 0.971 - - 0.777 - - 0.824 transcription elongation factor B (SIII), polypeptide 3
9. gabarapl2 ENSDARG00000027200 5120 2.434 - 0.769 0.956 - - 0.709 - - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
10. si:ch73-110p20.1 5932 1.981 - - - 0.985 - - 0.996 - - si:ch73-110p20.1
11. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.964 - - 0.966 - - - 0.998 - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
12. grpel2 ENSDARG00000069421 5673 1.953 - - 0.957 - - - 0.996 - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
13. creb1a ENSDARG00000053586 5068 1.949 - - 0.955 0.994 - - - - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
14. CR954963.1 ENSDARG00000097153 1135 1.949 - - 0.974 - 0.975 - - - -
15. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.943 - - - 0.978 - - 0.965 - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
16. itgb1bp1 ENSDARG00000007169 2723 1.936 - - 0.970 - 0.966 - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
17. sub1a ENSDARG00000053446 13383 1.928 - - - 0.936 - - 0.992 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
18. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 1.91 - - - - 0.914 - 0.996 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
19. trappc1 ENSDARG00000039005 6990 1.885 - - 0.907 0.978 - - - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
20. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 1.865 - - 0.870 - - - 0.995 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
21. hif1ab ENSDARG00000034293 10284 1.844 - - 0.915 - 0.929 - - - - hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
22. bckdk ENSDARG00000016904 3775 1.83 - - - - 0.976 0.854 - - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
23. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.824 - 0.852 0.972 - - - - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
24. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.824 - - 0.939 - - 0.885 - - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
25. gdi1 ENSDARG00000056122 4106 1.789 - - - 0.988 - - - - 0.801 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
26. tcn2l tcn2l 2428 1.785 - 0.831 - - 0.954 - - - -
27. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 1.784 - 0.786 - - - - 0.998 - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
28. kctd9 kctd9 973 1.773 - - - - 0.979 0.794 - - -
29. hif1al ENSDARG00000100826 18627 1.772 - - - 0.960 - 0.812 - - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
30. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 1.767 - - - - - 0.769 0.998 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
31. sesn3 ENSDARG00000015822 5328 1.765 - - 0.973 - - - - - 0.792 sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
32. stmn1a ENSDARG00000004169 21169 1.754 - - - 0.944 0.810 - - - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
33. lsm14aa ENSDARG00000006600 2298 1.745 - - 0.970 - - 0.775 - - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
34. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.744 - - - - 0.979 - - - 0.765 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
35. nt5c2b ENSDARG00000058231 3822 1.741 - - - 0.990 - - - - 0.751 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
36. mrpl43 ENSDARG00000076334 4045 1.74 - - - - 0.751 - 0.989 - - mitochondrial ribosomal protein L43 [Source:ZFIN;Acc:ZDB-GENE-040718-125]
37. ZNF462 ENSDARG00000112909 1132 1.735 - - - - - - 0.999 - 0.736 zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
38. si:dkey-13i19.8 ENSDARG00000093058 4617 1.729 - - - - - 0.749 0.980 - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
39. cdh1 ENSDARG00000102750 8654 1.728 - 0.751 - - - - 0.977 - - cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
40. med6 ENSDARG00000034734 2711 1.721 - - - - - 0.722 0.999 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
41. zgc:56530 zgc:56530 6300 1.721 - - - - 0.963 0.758 - - -
42. rab7 ENSDARG00000020497, ENSDARG00000109813, ENSDARG00000110814 2627 1.718 - 0.721 - - - - 0.997 - - RAB7, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-1352]
43. elavl1 11672 1.718 - - - 0.947 0.771 - - - - ELAV like RNA binding protein 1, transcript variant X3
44. srm ENSDARG00000055760 6572 1.716 - 0.728 - 0.988 - - - - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
45. mrps18b ENSDARG00000007065 2121 1.713 - - 0.965 - - - - - 0.748 mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
46. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 1.711 0.730 - - - 0.981 - - - -
47. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.71 - - 0.968 - - 0.742 - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
48. pmp22a ENSDARG00000105223, ENSDARG00000115339 9849 1.708 - - - - 0.926 0.782 - - - peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
49. f11r f11r 16668 1.708 - - 0.943 - 0.765 - - - -
50. wdr45 ENSDARG00000090219 829 1.702 - - 0.987 - - - - - 0.715 WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
51. hdac10 ENSDARG00000086458 676 1.701 - - 0.973 - - - - - 0.728 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
52. arhgdig ENSDARG00000004034 10368 1.698 - 0.715 - 0.983 - - - - - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
53. hectd1 ENSDARG00000054213 3501 1.697 - - 0.972 - - 0.725 - - - HECT domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030616-153]
54. irx5a ENSDARG00000034043 1694 1.695 - - - - 0.960 - - - 0.735 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
55. fuca1 fuca1 6176 1.695 - 0.706 - - - - 0.989 - -
56. hrsp12 3981 1.692 - 0.720 - - - - 0.972 - - heat-responsive protein 12, transcript variant 1
57. SIK1 ENSDARG00000058606 1982 1.691 - - 0.972 - - 0.719 - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
58. fryl ENSDARG00000040001 3256 1.689 - - 0.975 - - 0.714 - - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
59. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.687 - - - 0.982 - - - 0.705 - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
60. nhp2l1b nhp2l1b 3898 1.682 - - - - 0.922 0.760 - - -
61. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.681 - - - - 0.978 0.703 - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
62. pias2 ENSDARG00000092979, ENSDARG00000115060 2317 1.676 - - - 0.833 - 0.843 - - - protein inhibitor of activated STAT, 2 [Source:ZFIN;Acc:ZDB-GENE-060424-1]
63. anxa1c ENSDARG00000104359 23181 1.673 - - - - - 0.720 0.953 - - annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
64. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.668 - - - - - 0.854 0.814 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
65. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.66 - 0.822 - - - 0.838 - - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
66. sepw1 17630 1.648 - 0.834 0.814 - - - - - - selenoprotein W, 1
67. pvrl1b 1645 1.637 - - - - - 0.855 - - 0.782 poliovirus receptor-related 1b
68. MATR3 MATR3 3962 1.632 - - - - 0.924 - - - 0.708
69. erh ENSDARG00000032866 20633 1.629 - - - 0.749 - 0.880 - - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
70. tmed4 ENSDARG00000024954 3476 1.619 - 0.833 - - - 0.786 - - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
71. cstf3 ENSDARG00000018904 6111 1.617 - - - 0.782 0.835 - - - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
72. CABZ01055343.2 CABZ01055343.2 10312 1.599 - 0.806 - - - 0.793 - - -
73. prkar2aa ENSDARG00000033184 14704 1.592 - - 0.773 - 0.819 - - - - protein kinase, cAMP-dependent, regulatory, type II, alpha A [Source:ZFIN;Acc:ZDB-GENE-030131-1007]
74. ranbp9 ENSDARG00000061048 2687 1.572 - - - - - 0.724 - - 0.848 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
75. pcbd1 ENSDARG00000031981 3373 1.562 - 0.795 - - - - - - 0.767 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
76. arpc5a ENSDARG00000039142 5482 1.55 - - - - 0.824 0.726 - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
77. tgif1 ENSDARG00000059337 4020 1.549 - - - - 0.829 0.720 - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
78. gid8b ENSDARG00000037589 2121 1.545 - - - - - 0.803 - - 0.742 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
79. ncl ENSDARG00000002710 16951 1.542 - - - 0.790 0.752 - - - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
80. taz ENSDARG00000041421 985 1.534 - - - - - 0.786 - - 0.748 tafazzin [Source:ZFIN;Acc:ZDB-GENE-030131-684]
81. umps ENSDARG00000012215 4564 1.534 - 0.798 - - - - - - 0.736 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
82. sec11a ENSDARG00000008936, ENSDARG00000116303 6529 1.533 - 0.823 - - - - - - 0.710 SEC11 homolog A, signal peptidase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040718-227]
83. fgfr1a ENSDARG00000011027 2705 1.53 - - - - - 0.745 - - 0.785 fibroblast growth factor receptor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-255]
84. serp1 ENSDARG00000099439 23682 1.52 - - - - 0.744 0.776 - - - stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]
85. ppp1r12a ENSDARG00000010784 4333 1.516 - - - - - 0.796 - - 0.720 protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
86. DLC1 ENSDARG00000079317 2149 1.511 - 0.741 - - - - - - 0.770 DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
87. KIF1A KIF1A 1686 1.508 - - - - - 0.798 - - 0.710
88. krt5 ENSDARG00000058371, ENSDARG00000112017 32812 1.489 - 0.760 - 0.729 - - - - - keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
89. ufc1 ENSDARG00000022340 2618 1.488 - 0.732 - - - 0.756 - - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
90. tmem18 ENSDARG00000036704 1784 1.487 - 0.724 - - - 0.763 - - - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
91. CU928061.2 CU928061.2 4550 1.485 - 0.743 - - - 0.742 - - -
92. samm50l ENSDARG00000039681 2465 1.485 - - - - - 0.707 - - 0.778 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
93. npc1 ENSDARG00000017180 3724 1.482 0.714 0.768 - - - - - - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
94. hdac4 ENSDARG00000098349 1370 1.481 - - - - - 0.722 - - 0.759 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
95. pef1 ENSDARG00000023989 3013 1.478 - 0.724 - - - 0.754 - - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
96. gpr143 ENSDARG00000034572 559 1.474 - - - - - 0.761 - - 0.713 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
97. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.472 - - - - - 0.725 - - 0.747 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
98. srek1ip1 ENSDARG00000043728 985 1.468 - - - - - 0.717 - - 0.751 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
99. nfkbiab ENSDARG00000007693 1345 1.468 - 0.702 - - - - - - 0.766 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
100. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.467 - - - - - 0.733 - - 0.734 abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]

There are 1379 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA