Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3BGR

Gene Name Gene ID Reads Annotation
SH3BGR ENSGALG00000016127 2561 SH3 domain binding glutamate rich protein











Genes with expression patterns similar to SH3BGR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SH3BGR ENSGALG00000016127 2561 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SH3 domain binding glutamate rich protein
2. ACTC1 ENSGALG00000009844 20914 3.236 0.876 - 0.802 0.832 - - - - - 0.726 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. gga-mir-7474 ENSGALG00000033766 5727 3.226 0.818 - 0.830 0.800 - - - - - 0.778 gga-mir-7474 [Source:miRBase;Acc:MI0024147]
4. TNNT3 ENSGALG00000006572 1652 2.42 - - 0.852 0.750 - - - - - 0.818 troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
5. TRIM55 ENSGALG00000041327 1097 2.37 0.867 - 0.789 - - 0.714 - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
6. KLHL31 ENSGALG00000016309 1518 2.369 0.780 - 0.828 0.761 - - - - - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
7. C1QTNF3 ENSGALG00000027887 8646 2.351 - - 0.813 0.757 - 0.781 - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
8. HSPB8 ENSGALG00000007383 5333 2.218 - - 0.769 0.707 - - 0.742 - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
9. BHMT ENSGALG00000004518 4700 1.695 - - - 0.712 0.983 - - - - - betaine--homocysteine S-methyltransferase
10. MYL3 ENSGALG00000005448 3379 1.669 0.870 - 0.799 - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
11. TMEM182 ENSGALG00000038936 274 1.566 - - 0.756 0.810 - - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
12. ACTN2 ENSGALG00000014463 1724 1.558 0.844 - 0.714 - - - - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
13. TNNT2 ENSGALG00000000302 568 1.55 0.820 - 0.730 - - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
14. MYOG ENSGALG00000000172 460 1.529 - - 0.805 - - - - - - 0.724 myogenin [Source:NCBI gene;Acc:374004]
15. SVIL ENSGALG00000007331 12032 1.519 0.707 - - - 0.812 - - - - - supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
16. XIRP1 ENSGALG00000006025 729 1.511 0.703 - - 0.808 - - - - - - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
17. NEXN ENSGALG00000008945 1504 1.494 0.713 - 0.781 - - - - - - - nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
18. MYF5 ENSGALG00000028091 1965 1.483 - - 0.741 - - 0.742 - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
19. RGMA ENSGALG00000039173 12874 1.466 - - - - 0.740 0.726 - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
20. MOB3A ENSGALG00000031729 9690 1.439 - - - - 0.731 - - 0.708 - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
21. FNDC5 ENSGALG00000003567 3328 0.982 - - - - 0.982 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
22. SYNE1 ENSGALG00000013505 2324 0.98 - - - - 0.980 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
23. YARS ENSGALG00000003563 11093 0.979 - - - - 0.979 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
24. SMG7 ENSGALG00000004667 707 0.979 - - - - 0.979 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
25. RAMP3 ENSGALG00000037246 1187 0.979 - - - - 0.979 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
26. PREP2 PREP2 238 0.979 - - - - 0.979 - - - - -
27. ETS1 ENSGALG00000001143 7284 0.979 - - - - 0.979 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
28. PRDM4 ENSGALG00000012619 876 0.978 - - - - 0.978 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
29. KIF11 ENSGALG00000030597 5528 0.978 - - - - 0.978 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
30. SDCBP ENSGALG00000015436 1228 0.978 - - - - 0.978 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
31. ANKRD9 ENSGALG00000011376 525 0.978 - - - - 0.978 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
32. NEK6 ENSGALG00000001118 20333 0.977 - - - - 0.977 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
33. LZIC ENSGALG00000002616 9052 0.977 - - - - 0.977 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
34. MED8 ENSGALG00000009993 3095 0.977 - - - - 0.977 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
35. RBM6 ENSGALG00000035578 1690 0.977 - - - - 0.977 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
36. PTK2B ENSGALG00000016564 406 0.977 - - - - 0.977 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
37. BRF1 ENSGALG00000011705 3406 0.976 - - - - 0.976 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
38. C9orf85 ENSGALG00000026001 4110 0.976 - - - - 0.976 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
39. STARD3NL ENSGALG00000033038 4851 0.976 - - - - 0.976 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
40. PITHD1 ENSGALG00000003986 11470 0.976 - - - - 0.976 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
41. GTF2H1 ENSGALG00000042340 1553 0.976 - - - - 0.976 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
42. BAHD1 ENSGALG00000033675 1779 0.976 - - - - 0.976 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
43. CDKN1B ENSGALG00000022980 4606 0.976 - - - - 0.976 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
44. NDUFV1 ENSGALG00000042809 6222 0.976 - - - - 0.976 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
45. PHTF1 ENSGALG00000001845 3276 0.976 - - - - 0.976 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
46. DLL1 ENSGALG00000011182 1613 0.975 - - - - 0.975 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
47. ASAP2 ENSGALG00000016419 1393 0.975 - - - - 0.975 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
48. ENSGALG00000027854 ENSGALG00000027854 5007 0.975 - - - - 0.975 - - - - -
49. EDNRA ENSGALG00000010013 2472 0.974 - - - - 0.974 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
50. SAP30 ENSGALG00000036252 2032 0.974 - - - - 0.974 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
51. RBM34 ENSGALG00000029915 5618 0.973 - - - - 0.973 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
52. WDR92 ENSGALG00000008760 3934 0.973 - - - - 0.973 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
53. ENSGALG00000006569 ENSGALG00000006569 2169 0.973 - - - - 0.973 - - - - -
54. HSF2 ENSGALG00000038420 5259 0.972 - - - - 0.972 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
55. LOC426385 ENSGALG00000026301 2703 0.972 - - - - 0.972 - - - - - serine/threonine kinase 35-like, transcript variant X2
56. TMF1 ENSGALG00000013408 3344 0.972 - - - - 0.972 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
57. MRPL16 ENSGALG00000029419 8033 0.972 - - - - 0.972 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
58. TIMMDC1 ENSGALG00000024480 9337 0.971 - - - - 0.971 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
59. IARS2 ENSGALG00000009566 4599 0.97 - - - - 0.970 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
60. COQ5 ENSGALG00000007185 5614 0.97 - - - - 0.970 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
61. RAD54B ENSGALG00000043597 1699 0.97 - - - - 0.970 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
62. MED21 ENSGALG00000027435 5766 0.97 - - - - 0.970 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
63. RALGDS ENSGALG00000003412 4478 0.969 - - - - 0.969 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
64. LMAN2 ENSGALG00000033232 11740 0.968 - - - - 0.968 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
65. FUNDC2 ENSGALG00000029585 9334 0.967 - - - - 0.967 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
66. DGKZ ENSGALG00000008380 5389 0.967 - - - - 0.967 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
67. SFXN5 ENSGALG00000016094 2678 0.965 - - - - 0.965 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
68. PSMG3 ENSGALG00000004203 11240 0.965 - - - - 0.965 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
69. SNX14 ENSGALG00000015831 2554 0.965 - - - - 0.965 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
70. MEF2BNB MEF2BNB 5578 0.965 - - - - 0.965 - - - - -
71. MARC1 ENSGALG00000009453 5675 0.963 - - - - 0.963 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
72. HARS ENSGALG00000035080 11602 0.962 - - - - 0.962 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
73. UTP6 ENSGALG00000003260 4909 0.962 - - - - 0.962 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
74. CDCA7 ENSGALG00000040833 7484 0.961 - - - - 0.961 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
75. LGALS1 ENSGALG00000012420 13993 0.961 - - - - 0.961 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
76. TSPO2 ENSGALG00000003212 5141 0.96 - - - - 0.960 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
77. PBRM1 ENSGALG00000037455 6450 0.959 - - - - 0.959 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
78. UPF3B ENSGALG00000008618 12350 0.959 - - - - 0.959 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
79. DENR ENSGALG00000003795 30805 0.958 - - - - 0.958 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
80. ACAT2 ENSGALG00000011659 12825 0.958 - - - - 0.958 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
81. PSMD3 ENSGALG00000033162 25615 0.957 - - - - 0.957 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
82. MYO9A ENSGALG00000033618 4505 0.957 - - - - 0.957 - - - - - myosin IXA, transcript variant X10
83. NDUFS4 ENSGALG00000028026 25876 0.956 - - - - 0.956 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
84. CCDC132 CCDC132 2632 0.956 - - - - 0.956 - - - - -
85. GATC ENSGALG00000007195 8610 0.956 - - - - 0.956 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
86. MYBL2 ENSGALG00000003503 15875 0.954 - - - - 0.954 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
87. DLD ENSGALG00000007931 11011 0.954 - - - - 0.954 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
88. WNK2 ENSGALG00000038850 4712 0.953 - - - - 0.953 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
89. RHOT1 ENSGALG00000003397 5149 0.953 - - - - 0.953 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
90. NUP88 ENSGALG00000032280 9847 0.952 - - - - 0.952 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
91. SLMO2 SLMO2 9207 0.952 - - - - 0.952 - - - - -
92. CDH3 5050 0.951 - - - - 0.951 - - - - - cadherin 3
93. SRP19 ENSGALG00000000218 14207 0.95 - - - - 0.950 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
94. LGMN ENSGALG00000010811 7401 0.95 - - - - 0.950 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
95. SPRED1 ENSGALG00000028203 6520 0.949 - - - - 0.949 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
96. SLC30A4 ENSGALG00000005703 5696 0.947 - - - - 0.947 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
97. TAF3 ENSGALG00000006731 15569 0.947 - - - - 0.947 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
98. PRCC ENSGALG00000040696 9346 0.947 - - - - 0.947 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
99. ZYX ENSGALG00000014688 8686 0.946 - - - - 0.946 - - - - - zyxin [Source:NCBI gene;Acc:418300]
100. ZC3H6 ENSGALG00000008269 10353 0.945 - - - - 0.945 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]

There are 166 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA