Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH2D4B

Gene Name Gene ID Reads Annotation
SH2D4B ENSGALG00000002370 10 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]











Genes with expression patterns similar to SH2D4B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SH2D4B ENSGALG00000002370 10 4 - - - 1.000 1.000 1.000 - - - 1.000 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
2. SLC26A11 ENSGALG00000007018 7 1.66 - - - - - 0.868 - - - 0.792 solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
3. RS1 ENSGALG00000016523 11 1.621 - - - 0.712 - - - - - 0.909 retinoschisin 1 [Source:NCBI gene;Acc:772315]
4. SCT ENSGALG00000034822, ENSGALG00000037020 14 1.541 - - - 0.712 0.829 - - - - - secretin, transcript variant X6
5. TDRD5 ENSGALG00000033634 40 1 - - - - 1.000 - - - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
6. PTPN3 ENSGALG00000022909 6 1 - - - - 1.000 - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
7. UPK3A ENSGALG00000014227 7 1 - - - - 1.000 - - - - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
8. SLC6A6 ENSGALG00000006425 31 1 - - - - 1.000 - - - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
9. CRYBG3 7 1 - - - - 1.000 - - - - - crystallin beta-gamma domain containing 3, transcript variant X2
10. FAM131B ENSGALG00000014689 1 1 - - - - 1.000 - - - - - family with sequence similarity 131 member B [Source:HGNC Symbol;Acc:HGNC:22202]
11. ENSGALG00000014141 ENSGALG00000014141 3 1 - - - - 1.000 - - - - -
12. IBSP ENSGALG00000010928 1 1 - - - - 1.000 - - - - - integrin binding sialoprotein [Source:NCBI gene;Acc:396071]
13. BLB1 ENSGALG00000000141 13 1 - - - - 1.000 - - - - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
14. PLCD3 ENSGALG00000045212 5 1 - - - - 1.000 - - - - - phospholipase C delta 3 [Source:HGNC Symbol;Acc:HGNC:9061]
15. LEPR ENSGALG00000011058 4 1 - - - - 1.000 - - - - - leptin receptor [Source:NCBI gene;Acc:374223]
16. FGF3 ENSGALG00000026853 89 0.99 - - - - - 0.990 - - - - fibroblast growth factor 3 [Source:NCBI gene;Acc:396267]
17. MEGF6L ENSGALG00000009458 14 0.962 - - - - - 0.962 - - - - multiple EGF-like-domains 6-like, transcript variant X21
18. CD99L2 ENSGALG00000009075 5 0.946 - - - - 0.946 - - - - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
19. FAM117A ENSGALG00000009943 1 0.942 - - - - - 0.942 - - - - family with sequence similarity 117 member A [Source:HGNC Symbol;Acc:HGNC:24179]
20. MICAL2 ENSGALG00000005540 25 0.942 - - - - - 0.942 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24693]
21. PPP4R4 ENSGALG00000010950 19 0.942 - - - - - 0.942 - - - - protein phosphatase 4 regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:23788]
22. ARF1 ENSGALG00000005393 364 0.926 - - - - 0.926 - - - - - ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
23. ENSGALG00000019077 ENSGALG00000019077 49 0.925 - - - - - 0.925 - - - -
24. CUBN ENSGALG00000008704 21 0.917 - - - - 0.917 - - - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
25. ANGPTL3 ENSGALG00000010978 335 0.912 - - - - 0.912 - - - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
26. RBL2 ENSGALG00000003663 10 0.909 - - - - - - - - - 0.909 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
27. NT5E ENSGALG00000015833 5 0.909 - - - - - - - - - 0.909 5'-nucleotidase ecto
28. RAB9B ENSGALG00000004918 2 0.909 - - - - - - - - - 0.909 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
29. LRRN3 ENSGALG00000009488 1 0.909 - - - - - - - - - 0.909 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
30. DAPK1 ENSGALG00000012608 17 0.909 - - - - - - - - - 0.909 death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
31. WNT7A ENSGALG00000005123 2 0.909 - - - - - - - - - 0.909 Wnt family member 7A [Source:NCBI gene;Acc:374168]
32. MST MST 9 0.909 - - - - - - - - - 0.909
33. SNORA77 SNORA77 5 0.909 - - - - - - - - - 0.909
34. NUDT3 ENSGALG00000002830 7 0.909 - - - - - - - - - 0.909 nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
35. GRAMD2 GRAMD2 3 0.909 - - - - - - - - - 0.909
36. gga-mir-22 ENSGALG00000024507 2 0.909 - - - - - - - - - 0.909 gga-mir-22 [Source:miRBase;Acc:MI0006982]
37. SNX13 ENSGALG00000010840 13 0.909 - - - - - - - - - 0.909 sorting nexin 13 [Source:NCBI gene;Acc:420598]
38. IFN-GAMMA IFN-GAMMA 1 0.909 - - - - - - - - - 0.909
39. POLR3G ENSGALG00000014650 7 0.909 - - - - - - - - - 0.909 RNA polymerase III subunit G, transcript variant X2
40. ENSGALG00000026496 ENSGALG00000026496 9 0.909 - - - - - - - - - 0.909
41. ACOT1L ENSGALG00000008752 6 0.909 - - - - - - - - - 0.909 acyl-CoA thioesterase 1-like
42. RUFY4 2 0.909 - - - - - - - - - 0.909 RUN and FYVE domain containing 4, transcript variant X5
43. C8B ENSGALG00000010853 21 0.909 - - - - - - - - - 0.909 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
44. CAMTA1 ENSGALG00000039525 1 0.909 - - - - - - - - - 0.909 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
45. EXOC6B ENSGALG00000016098 3 0.909 - - - - - - - - - 0.909 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
46. TTC29 ENSGALG00000010009 4 0.909 - - - - - - - - - 0.909 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
47. ENSGALG00000009487 ENSGALG00000009487 1 0.909 - - - - - - - - - 0.909
48. C6orf58 ENSGALG00000045522 2 0.909 - - - - - - - - - 0.909 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
49. ENSGALG00000024286 ENSGALG00000024286 2 0.909 - - - - - - - - - 0.909
50. FOSL2 ENSGALG00000010036 3 0.909 - - - - - - - - - 0.909 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]
51. ENSGALG00000004619 ENSGALG00000004619 3 0.909 - - - - - - - - - 0.909
52. TRIM36 ENSGALG00000008188 1 0.909 - - - - - - - - - 0.909 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
53. ESR2 ENSGALG00000011801 7 0.909 - - - - - - - - - 0.909 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
54. HMGCLL1 ENSGALG00000016294 33 0.9 - - - - - - - - - 0.900 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
55. RAB11FIP1 41 0.898 - - - - - 0.898 - - - - RAB11 family interacting protein 1, transcript variant X2
56. CDH6 ENSGALG00000012917 17 0.895 - - - - - - - - - 0.895 cadherin 6 [Source:NCBI gene;Acc:414842]
57. SNORA40 SNORA40 12 0.881 - - - - - - - - - 0.881
58. PLCD4 ENSGALG00000026687 24 0.879 - - - - 0.879 - - - - - phospholipase C delta 4 [Source:HGNC Symbol;Acc:HGNC:9062]
59. SCN4B ENSGALG00000007409 22 0.879 - - - - 0.879 - - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
60. MLNR ENSGALG00000017003 10 0.879 - - - - 0.879 - - - - - motilin receptor [Source:NCBI gene;Acc:428072]
61. EXOC6 ENSGALG00000006763 119 0.876 - - - - 0.876 - - - - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
62. RC3H1 ENSGALG00000004587 40 0.875 - - - - - 0.875 - - - - ring finger and CCCH-type domains 1 [Source:HGNC Symbol;Acc:HGNC:29434]
63. CHSY1 ENSGALG00000026468 4 0.868 - - - - - 0.868 - - - - chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
64. SCARNA23 SCARNA23 2 0.868 - - - - - 0.868 - - - -
65. CCDC64 CCDC64 2 0.868 - - - - - 0.868 - - - -
66. KLHL23 ENSGALG00000020737 13 0.868 - - - - - 0.868 - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
67. DDTNFR23 ENSGALG00000006407 4 0.868 - - - - - 0.868 - - - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
68. CFUC-TIX CFUC-TIX 1 0.868 - - - - - 0.868 - - - -
69. ST6GALNAC3 ENSGALG00000009027 17 0.868 - - - - - 0.868 - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
70. SRRM3 ENSGALG00000001932 12 0.868 - - - - - 0.868 - - - - serine/arginine repetitive matrix 3 [Source:HGNC Symbol;Acc:HGNC:26729]
71. P2RX3 ENSGALG00000040479 5 0.868 - - - - - 0.868 - - - - Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
72. PAPPA ENSGALG00000007079 6 0.868 - - - - - 0.868 - - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
73. GPR12 ENSGALG00000017102 4 0.868 - - - - - 0.868 - - - - G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
74. ENSGALG00000026368 ENSGALG00000026368 1 0.868 - - - - - 0.868 - - - -
75. ENSGALG00000022715 ENSGALG00000022715 13 0.868 - - - - - 0.868 - - - -
76. FGL1 ENSGALG00000013606 42 0.868 - - - - - 0.868 - - - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
77. ACRBP 0 0.868 - - - - - 0.868 - - - - acrosin binding protein
78. TP63 ENSGALG00000007324 6 0.868 - - - - - 0.868 - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
79. ENSGALG00000028531 ENSGALG00000028531 2 0.868 - - - - - 0.868 - - - -
80. MARCO ENSGALG00000012119 5 0.868 - - - - - 0.868 - - - - macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
81. WDR63 ENSGALG00000008696 15 0.868 - - - - - 0.868 - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
82. GVINP1 ENSGALG00000016556 4 0.868 - - - - - 0.868 - - - - GTPase, very large interferon inducible pseudogene 1, transcript variant X1
83. CTSD ENSGALG00000006613 4 0.868 - - - - - 0.868 - - - - cathepsin D [Source:NCBI gene;Acc:396090]
84. SERPINB5 ENSGALG00000012873 24 0.868 - - - - - 0.868 - - - - serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
85. MAPK11 ENSGALG00000040023 15 0.868 - - - - - 0.868 - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
86. FAM149B1 ENSGALG00000002693 16 0.868 - - - - - 0.868 - - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
87. TMEM8C ENSGALG00000021520 30 0.868 - - - - - 0.868 - - - - Gallus gallus transmembrane protein 8C (TMEM8C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318457]
88. ENSGALG00000020349 ENSGALG00000020349 10 0.868 - - - - - 0.868 - - - -
89. TOX3 ENSGALG00000034649 54 0.868 - - - - - 0.868 - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
90. ST7L ENSGALG00000001538 5 0.868 - - - - - 0.868 - - - - suppression of tumorigenicity 7 like [Source:NCBI gene;Acc:395331]
91. TSSK3 4 0.868 - - - - - 0.868 - - - - testis specific serine kinase 3
92. TRH ENSGALG00000008490 16 0.868 - - - - - 0.868 - - - - thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
93. NOXO1 ENSGALG00000005572 14 0.868 - - - - - 0.868 - - - - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
94. STK35 ENSGALG00000036219 0 0.868 - - - - - 0.868 - - - - serine/threonine kinase 35 [Source:HGNC Symbol;Acc:HGNC:16254]
95. LOC100858814 ENSGALG00000028210 3 0.868 - - - - - 0.868 - - - - adenine phosphoribosyltransferase-like, transcript variant X1
96. BACE1 ENSGALG00000007298 3 0.868 - - - - - 0.868 - - - - beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]
97. BANK1 ENSGALG00000012292 17 0.868 - - - - - 0.868 - - - - B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
98. DIET1 DIET1 1 0.868 - - - - - 0.868 - - - -
99. OSTN ENSGALG00000007226 33 0.868 - - - - - 0.868 - - - - osteocrin [Source:NCBI gene;Acc:424907]
100. COTL1 ENSGALG00000017644 81 0.868 - - - - - 0.868 - - - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]

There are 115 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA