Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH2D3C

Gene Name Gene ID Reads Annotation
SH2D3C ENSGALG00000005036 5101 SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]











Genes with expression patterns similar to SH2D3C

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SH2D3C ENSGALG00000005036 5101 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
2. STK3 ENSGALG00000032850 6339 1.958 - - - - 0.974 - 0.984 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
3. GFPT1 ENSGALG00000036391 14025 1.932 - - - - 0.944 - 0.988 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
4. SFSWAP ENSGALG00000002487 9977 1.83 - - - - 0.950 - 0.880 - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
5. BTG1 ENSGALG00000011276 17496 1.801 - - - - 0.808 - 0.993 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
6. ELL2 ENSGALG00000014678 1111 1.773 - - - - 0.982 - - - 0.791 - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
7. PCBP4 ENSGALG00000027695 7937 1.754 - - - - 0.956 - - 0.798 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
8. ACTG1 ENSGALG00000001381 63905 1.75 - - - - 0.837 - 0.913 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
9. POGZ ENSGALG00000036365 4056 1.742 - - - - - - 0.999 - 0.743 - pogo transposable element with ZNF domain, transcript variant X2
10. IGF1R ENSGALG00000040651 772 1.718 - - - - 0.982 - - - 0.736 - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
11. LARS ENSGALG00000007494 13966 1.715 - - - - - - 0.977 0.738 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
12. TBCA ENSGALG00000004353 18510 1.631 - - - - 0.925 - - - 0.706 - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
13. ATP5A1 ATP5A1 32367 1.602 - - - - 0.819 - - 0.783 - -
14. FAM47E-STBD1 FAM47E-STBD1 1148 1.495 - - - - - - - 0.706 0.789 -
15. HOXB3 ENSGALG00000043219 5198 0.999 - - - - - - 0.999 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
16. CASC4 ENSGALG00000008208 8338 0.999 - - - - - - 0.999 - - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
17. ZCCHC17 ENSGALG00000000618 5163 0.999 - - - - - - 0.999 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
18. USP34 ENSGALG00000004455 6667 0.999 - - - - - - 0.999 - - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
19. C-MET C-MET 1650 0.999 - - - - - - 0.999 - - -
20. SAMM50 ENSGALG00000014194 20437 0.999 - - - - - - 0.999 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
21. TRIM37 ENSGALG00000005084 4036 0.999 - - - - - - 0.999 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
22. VPS41 ENSGALG00000031635 4391 0.999 - - - - - - 0.999 - - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
23. FAM206A ENSGALG00000019524 7170 0.999 - - - - - - 0.999 - - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
24. FAAH ENSGALG00000010433 3309 0.999 - - - - - - 0.999 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
25. RARRES2 ENSGALG00000042642 3043 0.999 - - - - - - 0.999 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
26. SLC9A3R2 ENSGALG00000005608 4220 0.998 - - - - - - 0.998 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
27. WDR33 ENSGALG00000002043 6340 0.998 - - - - - - 0.998 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
28. CCDC47 ENSGALG00000000564 6584 0.998 - - - - - - 0.998 - - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
29. TLE4 TLE4 7278 0.998 - - - - - - 0.998 - - -
30. GTF2I ENSGALG00000021665 6812 0.998 - - - - - - 0.998 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
31. SF3A1 ENSGALG00000007937 11716 0.998 - - - - - - 0.998 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
32. SSR1 ENSGALG00000012798 62626 0.997 - - - - - - 0.997 - - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
33. PPP1CB ENSGALG00000010026 6909 0.997 - - - - - - 0.997 - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
34. GAS41 GAS41 9941 0.997 - - - - - - 0.997 - - -
35. EIF5B ENSGALG00000016764 30681 0.997 - - - - - - 0.997 - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
36. STT3B ENSGALG00000011465 11939 0.997 - - - - - - 0.997 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
37. PCNA ENSGALG00000029292 19163 0.996 - - - - - - 0.996 - - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
38. TMEM9B ENSGALG00000005908 14074 0.996 - - - - - - 0.996 - - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
39. FKBP9 ENSGALG00000037669 12079 0.995 - - - - - - 0.995 - - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
40. NSF ENSGALG00000001055 7399 0.994 - - - - - - 0.994 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
41. BID ENSGALG00000013039 12427 0.993 - - - - - - 0.993 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
42. MTF2 ENSGALG00000043087 15225 0.991 - - - - - - 0.991 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
43. PPP1R8 ENSGALG00000000729 11797 0.99 - - - - - - 0.990 - - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
44. NAA15 ENSGALG00000009782 18563 0.988 - - - - - - 0.988 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
45. YY1 ENSGALG00000017388 1933 0.986 - - - - 0.986 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
46. FANCC ENSGALG00000012618 7002 0.985 - - - - - - 0.985 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
47. OLFML3 ENSGALG00000001956 28633 0.985 - - - - - - 0.985 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
48. SSPN ENSGALG00000014042 638 0.984 - - - - 0.984 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
49. CTSZ ENSGALG00000007462 630 0.983 - - - - 0.983 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
50. XPO7 ENSGALG00000001838 1875 0.983 - - - - 0.983 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
51. REST 2394 0.983 - - - - 0.983 - - - - - RE1 silencing transcription factor
52. ENSGALG00000011687 ENSGALG00000011687 4553 0.982 - - - - 0.982 - - - - -
53. ZBTB10 ENSGALG00000034376 3271 0.982 - - - - 0.982 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
54. DDX55 ENSGALG00000003298 2315 0.982 - - - - 0.982 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
55. EAPP ENSGALG00000010007 5080 0.982 - - - - 0.982 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
56. DNAJC12 ENSGALG00000002769 1418 0.981 - - - - 0.981 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
57. POLR3F ENSGALG00000008749 5645 0.98 - - - - 0.980 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
58. BAG4 ENSGALG00000003254 5751 0.98 - - - - 0.980 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
59. WDR82 ENSGALG00000025904 4783 0.98 - - - - 0.980 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
60. COIL ENSGALG00000003158 7806 0.98 - - - - 0.980 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
61. FH ENSGALG00000013165 13669 0.98 - - - - 0.980 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
62. SSR2 ENSGALG00000000764 32190 0.98 - - - - 0.980 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
63. CZH9ORF41 CZH9ORF41 3492 0.979 - - - - 0.979 - - - - -
64. PLAA ENSGALG00000001782 5459 0.979 - - - - 0.979 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
65. MKI67 ENSGALG00000025996 28136 0.979 - - - - 0.979 - - - - - marker of proliferation Ki-67, transcript variant X3
66. TRAPPC12 ENSGALG00000016387 2593 0.978 - - - - 0.978 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
67. MRPS27 ENSGALG00000015002 6541 0.977 - - - - 0.977 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
68. AATF ENSGALG00000005420 6501 0.977 - - - - 0.977 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
69. TCP11L1 ENSGALG00000011688 2427 0.977 - - - - 0.977 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
70. IGBP1 ENSGALG00000044628 9200 0.976 - - - - 0.976 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
71. CBWD1 ENSGALG00000010147 2765 0.976 - - - - 0.976 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
72. KNOP1 ENSGALG00000002042 6251 0.976 - - - - 0.976 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
73. FERMT2 ENSGALG00000012425 5480 0.976 - - - - 0.976 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
74. LPHN2 LPHN2 16507 0.976 - - - - - - 0.976 - - -
75. RABEP1 ENSGALG00000001737 2650 0.976 - - - - 0.976 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
76. COMMD8 ENSGALG00000026279 13509 0.976 - - - - 0.976 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
77. ATG5 ENSGALG00000015387 7752 0.975 - - - - 0.975 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
78. TLCD1 ENSGALG00000003973 17569 0.975 - - - - 0.975 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
79. CSNK1G1 ENSGALG00000030812 31618 0.975 - - - - 0.975 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
80. MRPL23 ENSGALG00000006561 13737 0.973 - - - - 0.973 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
81. SIRT1 ENSGALG00000002761 9028 0.973 - - - - 0.973 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
82. NAP1L1 ENSGALG00000010238 14506 0.973 - - - - 0.973 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
83. GPN3 ENSGALG00000003807 6320 0.972 - - - - 0.972 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
84. IGDCC4 ENSGALG00000007410 5457 0.971 - - - - 0.971 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
85. POLR2B ENSGALG00000011387 4864 0.971 - - - - 0.971 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
86. TLK2 ENSGALG00000000410 4690 0.971 - - - - 0.971 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
87. LATS2 4776 0.971 - - - - 0.971 - - - - - large tumor suppressor kinase 2
88. MRPS25 ENSGALG00000008506 12131 0.97 - - - - 0.970 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
89. NFASC ENSGALG00000031776 4264 0.97 - - - - 0.970 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
90. FBXO9 ENSGALG00000016320 9600 0.97 - - - - 0.970 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
91. CDC42SE2 ENSGALG00000027258 4725 0.969 - - - - 0.969 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
92. SHROOM2 ENSGALG00000030802 4517 0.969 - - - - 0.969 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
93. TMEM165 ENSGALG00000027886 5468 0.969 - - - - 0.969 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
94. SAR1B ENSGALG00000038753 6493 0.968 - - - - 0.968 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
95. NOL9 ENSGALG00000028958 23978 0.968 - - - - - - 0.968 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
96. REEP5 ENSGALG00000023157 6282 0.966 - - - - 0.966 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
97. DRAXIN ENSGALG00000004631 3122 0.965 - - - - 0.965 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
98. ENSGALG00000014852 ENSGALG00000014852 15288 0.965 - - - - 0.965 - - - - -
99. TK2 ENSGALG00000034216 5394 0.964 - - - - 0.964 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
100. PUM1 ENSGALG00000042598 9392 0.964 - - - - 0.964 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]

There are 378 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA