Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SGSM1_1

Gene Name Gene ID Reads Annotation
SGSM1_1 SGSM1_1 40










Genes with expression patterns similar to SGSM1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SGSM1_1 SGSM1_1 40 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1.854 0.854 - - 1.000 - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
3. guca1c ENSDARG00000030758 9 1.81 - - - 1.000 0.810 - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
4. si:ch211-190k17.13 si:ch211-190k17.13 48 1.769 - - - 0.769 - 1.000 - - -
5. pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 1.758 - - - 1.000 - - 0.758 - - poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]
6. CABZ01078944.1 CABZ01078944.1 9 1.751 0.854 - - - - - - 0.897 -
7. odf3l2 36 1.749 0.854 - - - - - - 0.895 - outer dense fiber of sperm tails 3-like 2
8. lppr4a lppr4a 141 1.747 0.854 - - - - 0.893 - - -
9. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1.738 - - - 0.879 - 0.859 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
10. ksr2 ENSDARG00000094526 134 1.736 0.803 - - - - - 0.933 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
11. si:dkey-4j21.1 17 1.735 0.854 - - - - - - 0.881 - si:dkey-4j21.1, transcript variant X2
12. crb1 ENSDARG00000100506, ENSDARG00000110621 373 1.726 - - - - - 0.942 0.784 - - crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
13. UNC13A UNC13A 36 1.713 - - - - - 0.935 0.778 - -
14. CABZ01113978.1 CABZ01113978.1 1 1.713 0.854 - - - - 0.859 - - -
15. C8H9orf172 C8H9orf172 113 1.692 0.854 - - - - - 0.838 - -
16. atpv0e2 ENSDARG00000059057 585 1.691 0.853 - - - - - 0.838 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
17. abcc5 ENSDARG00000061233 60 1.683 0.824 - - - - 0.859 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17]
18. si:ch211-216b21.2 ENSDARG00000060253 54 1.682 0.854 - - - - - 0.828 - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
19. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.672 0.796 - - - - - 0.876 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
20. trim9 ENSDARG00000039123 53 1.667 0.854 - - - - - 0.813 - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
21. PPFIA3 ENSDARG00000077053 310 1.666 0.840 - - - - - 0.826 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
22. cacng3b ENSDARG00000076401 91 1.666 0.858 - - - - - 0.808 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
23. shhb ENSDARG00000038867 338 1.656 - - - - - 0.882 0.774 - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
24. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.649 0.864 - - - - - 0.785 - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
25. eno2 ENSDARG00000014287 2162 1.644 0.807 - - - - - 0.837 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
26. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1.637 - - - - - 0.859 0.778 - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
27. chst2b ENSDARG00000058585 33 1.632 0.854 - - - - - 0.778 - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
28. spock2 ENSDARG00000075393 791 1.629 0.788 - - - - - 0.841 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
29. si:dkey-17e6.2 si:dkey-17e6.2 72 1.629 0.854 - - - - - 0.775 - -
30. C7H4orf48 C7H4orf48 1455 1.628 0.802 - - - - - 0.826 - -
31. chst3a ENSDARG00000061070 127 1.623 - - - - - - 0.820 0.803 - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
32. SLC2A13 SLC2A13 74 1.623 - - - - - 0.873 0.750 - -
33. CT583709.2 CT583709.2 55 1.622 - - 0.748 - - - - 0.874 -
34. pclob ENSDARG00000098880 60 1.614 - - - 0.907 - 0.707 - - - piccolo presynaptic cytomatrix protein b [Source:ZFIN;Acc:ZDB-GENE-030131-8100]
35. 5S_rRNA_22 5S_rRNA_22 45 1.612 0.854 - - - - - 0.758 - -
36. scn1bb ENSDARG00000105003 239 1.608 0.887 - - - - - 0.721 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
37. her8.2 ENSDARG00000069675 315 1.608 0.780 - - - - - 0.828 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
38. si:ch73-191k20.4 37 1.607 - - 0.748 - - 0.859 - - - si:ch73-191k20.4, transcript variant X1
39. BX470131.1 BX470131.1 86 1.604 0.854 - - - - - 0.750 - -
40. sdcbp ENSDARG00000030097 196 1.596 0.754 - - - - - 0.842 - - syndecan binding protein (syntenin) [Source:ZFIN;Acc:ZDB-GENE-081104-57]
41. calb1 ENSDARG00000031598 252 1.596 0.746 - - - - - 0.850 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
42. elavl2 ENSDARG00000040732 44 1.595 - - - - 0.736 0.859 - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
43. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.593 0.784 - - - - - 0.809 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
44. TMEM100_1 TMEM100_1 44 1.587 - - - - - 0.810 0.777 - -
45. LRRN3 LRRN3 261 1.587 0.788 - - - - - 0.799 - -
46. diras1a ENSDARG00000028066 126 1.579 0.878 - - - - - 0.701 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
47. FUT9 FUT9 91 1.575 0.854 - - - - - 0.721 - -
48. rtn4r ENSDARG00000090035 46 1.575 0.854 - - - - - 0.721 - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
49. prok1 ENSDARG00000073948, ENSDARG00000114411 26 1.574 - - 0.748 - - - 0.826 - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
50. CABZ01065506.1 CABZ01065506.1 204 1.56 0.854 - - - - - 0.706 - -
51. shisa7 shisa7 181 1.552 0.764 - - - - - 0.788 - -
52. GADD45G GADD45G 382 1.55 0.811 - - - - - 0.739 - -
53. CR407704.1 CR407704.1 188 1.544 0.838 - - - - - 0.706 - -
54. fhdc1 ENSDARG00000074812 934 1.53 0.753 - - - - - 0.777 - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
55. nptx1l ENSDARG00000074671 569 1.523 0.719 - - - - - 0.804 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
56. dync1i1 ENSDARG00000060948 554 1.52 0.720 - - - - - 0.800 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
57. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.519 0.765 - - - - - 0.754 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
58. gxylt1b ENSDARG00000022550 160 1.518 - - - - - - 0.756 0.762 - glucoside xylosyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041210-116]
59. scg2a 800 1.515 - - - - - 0.728 0.787 - - secretogranin II (chromogranin C) a
60. slc1a2b ENSDARG00000102453 3136 1.513 0.794 - - - - - 0.719 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
61. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.512 0.725 - - - - - 0.787 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
62. prkaa2 ENSDARG00000060641 12 1.512 - - 0.748 - - 0.764 - - - protein kinase, AMP-activated, alpha 2 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081120-5]
63. sox21b ENSDARG00000008540 1460 1.506 0.727 - - - - - 0.779 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
64. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.505 0.717 - - - - - 0.788 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
65. add2 ENSDARG00000074581 1402 1.504 0.718 - - - - - 0.786 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
66. CR848045.1 CR848045.1 459 1.501 0.781 - - - - - 0.720 - -
67. stx12l ENSDARG00000044605 99 1.499 - - - - - - 0.754 0.745 - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
68. nacad ENSDARG00000012347 1268 1.486 0.716 - - - - - 0.770 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
69. stx1b ENSDARG00000000503 2724 1.476 0.749 - - - - - 0.727 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
70. sept5a ENSDARG00000013843 1206 1.474 0.712 - - - - - 0.762 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
71. ATP6AP1L ATP6AP1L 164 1.473 0.708 - - - - - 0.765 - -
72. cyr61l2 ENSDARG00000099985 725 1.469 - - - - - 0.768 0.701 - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
73. clu ENSDARG00000010434 498 1.468 - - - - - 0.740 0.728 - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
74. scn2b ENSDARG00000101713 796 1.468 0.711 - - - - - 0.757 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
75. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 1.468 - - - - - 0.753 0.715 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
76. map7d2a ENSDARG00000068480 513 1.466 0.700 - - - - - 0.766 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
77. KCNJ6 ENSDARG00000058985 71 1.462 0.741 - - - - - 0.721 - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
78. SNAP91 ENSDARG00000098809 556 1.454 0.706 - - - - - 0.748 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
79. NEFH NEFH 101 1.453 0.750 - - - - - 0.703 - -
80. adora1 adora1 149 1.452 - - - - - 0.723 0.729 - -
81. tubb5 ENSDARG00000037997 18691 1.448 0.709 - - - - - 0.739 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
82. NTRK3 NTRK3 163 1.446 - - - - - 0.717 0.729 - -
83. cplx2l ENSDARG00000018997 3975 1.433 0.716 - - - - - 0.717 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
84. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.417 0.701 - - - - - 0.716 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
85. MYL2 MYL2 7 1 - - - 1.000 - - - - -
86. BX005442.2 ENSDARG00000111949 0 1 - - - 1.000 - - - - -
87. ERAP1_1 ERAP1_1 64 1 1.000 - - - - - - - -
88. U1_27 U1_27 0 1 - - - 1.000 - - - - -
89. si:dkey-19a16.2 ENSDARG00000058794 8 1 - - - - - 1.000 - - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
90. hes2.2 ENSDARG00000068168 197 1 - - - - - 1.000 - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
91. U1_24 U1_24 0 1 - - - 1.000 - - - - -
92. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1 1.000 - - - - - - - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
93. CU468142.1 CU468142.1 6 1 - - - 1.000 - - - - -
94. zgc:158654 19 1 - - - 1.000 - - - - - zgc:158654, transcript variant X1
95. Metazoa_SRP_4 Metazoa_SRP_4 0 1 - - - 1.000 - - - - -
96. CR626884.3 ENSDARG00000104648 1 1 - - - 1.000 - - - - -
97. ighv14-1 ENSDARG00000096418 17 1 - - - 1.000 - - - - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
98. cd44a ENSDARG00000087863 4 1 - - - 1.000 - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
99. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - 1.000 - - - - -
100. XKR7 ENSDARG00000026333 175 1 1.000 - - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]

There are 1512 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA