Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SGSM1

Gene Name Gene ID Reads Annotation
SGSM1 ENSGALG00000005379 10 small G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:29410]











Genes with expression patterns similar to SGSM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SGSM1 ENSGALG00000005379 10 3 - - - 1.000 1.000 1.000 - - - - small G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:29410]
2. ENSGALG00000023084 ENSGALG00000023084 10 1.755 - - - 0.755 1.000 - - - - -
3. TIE1 ENSGALG00000009957 97 1.711 - - - 0.785 - 0.926 - - - - tyrosine kinase with immunoglobulin like and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:11809]
4. IGFBP1 ENSGALG00000043493 68 1 - - - - - 1.000 - - - - insulin like growth factor binding protein 1 [Source:NCBI gene;Acc:408027]
5. C6orf132 ENSGALG00000028570 1 1 - - - - 1.000 - - - - - chromosome 6 open reading frame 132 [Source:HGNC Symbol;Acc:HGNC:21288]
6. SMTN 18 1 - - - - 1.000 - - - - - smoothelin, transcript variant X2
7. TBC1D13 ENSGALG00000004645 1 1 - - - - - 1.000 - - - - TBC1 domain family member 13 [Source:HGNC Symbol;Acc:HGNC:25571]
8. C1R ENSGALG00000014659 9 1 - - - - - 1.000 - - - - complement C1r [Source:HGNC Symbol;Acc:HGNC:1246]
9. SRSF2 ENSGALG00000017357 180 1 - - - - - 1.000 - - - - serine and arginine rich splicing factor 2 [Source:NCBI gene;Acc:396195]
10. RBP7 ENSGALG00000002637 11 1 - - - - - 1.000 - - - - retinol binding protein 7 [Source:HGNC Symbol;Acc:HGNC:30316]
11. UGP2 ENSGALG00000008855 20 1 - - - - - 1.000 - - - - UDP-glucose pyrophosphorylase 2 [Source:NCBI gene;Acc:373900]
12. ENSGALG00000002367 ENSGALG00000002367 10 1 - - - - 1.000 - - - - -
13. HELIOS HELIOS 2 1 - - - - 1.000 - - - - -
14. NCK2 ENSGALG00000016799 152 1 - - - - 1.000 - - - - - NCK adaptor protein 2 [Source:NCBI gene;Acc:418727]
15. KCNS2 ENSGALG00000043764 9 1 - - - - 1.000 - - - - - potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]
16. ENSGALG00000027201 ENSGALG00000027201 12 1 - - - - 1.000 - - - - -
17. FAM53B ENSGALG00000009718 1 1 - - - - - 1.000 - - - - family with sequence similarity 53 member B [Source:HGNC Symbol;Acc:HGNC:28968]
18. ZDHHC18 ENSGALG00000034910 16 1 - - - - - 1.000 - - - - zinc finger, DHHC-type containing 18 [Source:NCBI gene;Acc:419575]
19. NUDT2 ENSGALG00000027295 15 1 - - - - 1.000 - - - - - nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
20. C4A ENSGALG00000017040 5 1 - - - - - 1.000 - - - - complement C4A (Rodgers blood group), transcript variant X2
21. RQCD1 RQCD1 110 1 - - - - 1.000 - - - - -
22. LOC771066 ENSGALG00000026964 1 1 - - - - - 1.000 - - - - claw keratin-like, transcript variant X1
23. SPTSSBL ENSGALG00000026131 70 1 - - - - - 1.000 - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
24. TDRD6 48 1 - - - - - 1.000 - - - - tudor domain containing 6
25. SLC30A8 ENSGALG00000034377 3 1 - - - - 1.000 - - - - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
26. FAM83C ENSGALG00000031906 1 1 - - - - 1.000 - - - - - family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
27. SOD3 ENSGALG00000018557 16 1 - - - - 1.000 - - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
28. ENSGALG00000022792 ENSGALG00000022792 2 1 - - - - - 1.000 - - - -
29. SULT1C SULT1C 118 1 - - - - - 1.000 - - - -
30. ENSGALG00000004119 ENSGALG00000004119 1 1 - - - - - 1.000 - - - -
31. ESPN ENSGALG00000000645 2 1 - - - - - 1.000 - - - - espin [Source:HGNC Symbol;Acc:HGNC:13281]
32. SLC25A40 ENSGALG00000019662 1 1 - - - - 1.000 - - - - - solute carrier family 25 member 40 [Source:HGNC Symbol;Acc:HGNC:29680]
33. OLAH ENSGALG00000043833 3 1 - - - - - 1.000 - - - - oleoyl-ACP hydrolase [Source:HGNC Symbol;Acc:HGNC:25625]
34. LRP3 ENSGALG00000004853 13 1 - - - - 1.000 - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
35. RRP8 109 1 - - - - - 1.000 - - - - ribosomal RNA processing 8, methyltransferase, homolog (yeast), transcript variant X2
36. ZNF366 ENSGALG00000015008 189 1 - - - - - 1.000 - - - - zinc finger protein 366 [Source:HGNC Symbol;Acc:HGNC:18316]
37. SLC6A9 ENSGALG00000010098 5 1 - - - - 1.000 - - - - - solute carrier family 6 member 9 [Source:NCBI gene;Acc:424576]
38. CRBN ENSGALG00000008274 27 1 - - - - 1.000 - - - - - cereblon [Source:HGNC Symbol;Acc:HGNC:30185]
39. CD200L ENSGALG00000015395 14 1 - - - - - 1.000 - - - - CD200 molecule-like [Source:NCBI gene;Acc:418424]
40. IL4 ENSGALG00000006827 2 1 - - - - 1.000 - - - - - interleukin 4 [Source:NCBI gene;Acc:416330]
41. AK5 ENSGALG00000031652 12 1 - - - - 1.000 - - - - - adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
42. FRY ENSGALG00000017075 8 1 - - - - - 1.000 - - - - FRY microtubule binding protein [Source:HGNC Symbol;Acc:HGNC:20367]
43. ZBTB6 ENSGALG00000021570 15 1 - - - - 1.000 - - - - - zinc finger and BTB domain containing 6 [Source:NCBI gene;Acc:417108]
44. LOXL4 ENSGALG00000013090 9 1 - - - - - 1.000 - - - - lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
45. OTC ENSGALG00000016254 6 1 - - - - - 1.000 - - - - ornithine carbamoyltransferase [Source:NCBI gene;Acc:395735]
46. PKP3 ENSGALG00000004260 3 1 - - - - - 1.000 - - - - plakophilin 3 [Source:HGNC Symbol;Acc:HGNC:9025]
47. LINS LINS 18 1 - - - - 1.000 - - - - -
48. NETO1 ENSGALG00000041184 3 1 - - - - 1.000 - - - - - neuropilin and tolloid like 1 [Source:HGNC Symbol;Acc:HGNC:13823]
49. CLDN4 2 1 - - - - - 1.000 - - - - claudin 4
50. SLC26A2 ENSGALG00000001239 3 1 - - - - - 1.000 - - - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
51. CLCNKB ENSGALG00000003713 27 1 - - - - - 1.000 - - - - chloride voltage-gated channel Kb, transcript variant X3
52. LNX1 ENSGALG00000013940 2 1 - - - - 1.000 - - - - - ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
53. TREM-B1 ENSGALG00000003361 8 1 - - - - - 1.000 - - - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
54. MMP11 ENSGALG00000005968 3 1 - - - - 1.000 - - - - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
55. EPAS1 ENSGALG00000010005 14 1 - - - - - 1.000 - - - - endothelial PAS domain protein 1 [Source:NCBI gene;Acc:395596]
56. SGPP2 ENSGALG00000005245 20 1 - - - - - 1.000 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
57. VSTM2L ENSGALG00000006792 11 1 - - - - - 1.000 - - - - V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:16096]
58. ENSGALG00000000307 ENSGALG00000000307 29 1 - - - - 1.000 - - - - -
59. TMEM63C ENSGALG00000010406 1 1 - - - - 1.000 - - - - - transmembrane protein 63C [Source:HGNC Symbol;Acc:HGNC:23787]
60. ENSGALG00000025727 ENSGALG00000025727 26 0.992 - - - - - 0.992 - - - -
61. BTLA ENSGALG00000015398 34 0.984 - - - - - 0.984 - - - - B and T lymphocyte associated, transcript variant X1
62. BLB1 ENSGALG00000000141 13 0.982 - - - - - 0.982 - - - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
63. PCOLCE2 ENSGALG00000002623 8 0.976 - - - - - 0.976 - - - - procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
64. CKMT1A ENSGALG00000008352 44 0.971 - - - - - 0.971 - - - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
65. SEPN1 SEPN1 58 0.968 - - - - - 0.968 - - - -
66. PLCD4 ENSGALG00000026687 24 0.968 - - - - - 0.968 - - - - phospholipase C delta 4 [Source:HGNC Symbol;Acc:HGNC:9062]
67. MUC6 ENSGALG00000040530 11 0.963 - - - - - 0.963 - - - - mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
68. PDE8A ENSGALG00000005992 10 0.947 - - - - - 0.947 - - - - phosphodiesterase 8A [Source:HGNC Symbol;Acc:HGNC:8793]
69. KRT20 ENSGALG00000019716 11 0.947 - - - - - 0.947 - - - - keratin 20 [Source:NCBI gene;Acc:420045]
70. ARHGAP20 ENSGALG00000017150 100 0.941 - - - - - 0.941 - - - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
71. ZNF827 ENSGALG00000009982 7 0.931 - - - - - 0.931 - - - - zinc finger protein 827 [Source:HGNC Symbol;Acc:HGNC:27193]
72. SNORA31 SNORA31 183 0.931 - - - - - 0.931 - - - -
73. ABCA8 ENSGALG00000021399 11 0.926 - - - - - 0.926 - - - - ATP binding cassette subfamily A member 8
74. ALG12 ENSGALG00000008539 20 0.905 - - - - - 0.905 - - - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
75. FANCF ENSGALG00000003660 25 0.901 - - - - - 0.901 - - - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
76. CAMK4L ENSGALG00000015203 5 0.897 - - - - - 0.897 - - - - calcium/calmodulin-dependent protein kinase IV-like, transcript variant X3
77. PTPN13 ENSGALG00000011078 62 0.89 - - - - - 0.890 - - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
78. CYP4A22 ENSGALG00000020688 741 0.876 - - - - - 0.876 - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
79. AK8 ENSGALG00000040923 10 0.875 - - - - - 0.875 - - - - adenylate kinase 8, transcript variant X1
80. MYH7B ENSGALG00000030985 199 0.875 - - - - - 0.875 - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
81. TNS3 ENSGALG00000039139 63 0.869 - - - - - 0.869 - - - - tensin 3 [Source:NCBI gene;Acc:420792]
82. LAMA5 486 0.862 - - - - - 0.862 - - - - laminin subunit alpha 5, transcript variant X3
83. PRKCQ ENSGALG00000034970 19 0.858 - - - - - 0.858 - - - - protein kinase C theta [Source:HGNC Symbol;Acc:HGNC:9410]
84. FETUB ENSGALG00000008608 38 0.848 - - - - 0.848 - - - - - fetuin B [Source:NCBI gene;Acc:395404]
85. KRT15 ENSGALG00000019718 64 0.846 - - - - - 0.846 - - - - keratin 15 [Source:NCBI gene;Acc:408040]
86. TRPC2L ENSGALG00000017493 28 0.846 - - - - - 0.846 - - - - Putative short transient receptor potential channel 2-like protein
87. AFAP1L2 ENSGALG00000008999 1305 0.844 - - - - - 0.844 - - - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
88. DLEC1 ENSGALG00000005826 23 0.843 - - - - - 0.843 - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
89. CBX4 ENSGALG00000035911 105 0.841 - - - - - 0.841 - - - - chromobox 4 [Source:NCBI gene;Acc:395354]
90. CCP110 ENSGALG00000006925 59 0.836 - - - - - 0.836 - - - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
91. KLF9 ENSGALG00000027374 38 0.832 - - - - - 0.832 - - - - Kruppel like factor 9 [Source:HGNC Symbol;Acc:HGNC:1123]
92. MBIP ENSGALG00000010096 2476 0.825 - - - - - 0.825 - - - - MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:HGNC:20427]
93. SYNE3 ENSGALG00000011076 22 0.825 - - - - - 0.825 - - - - spectrin repeat containing nuclear envelope family member 3 [Source:HGNC Symbol;Acc:HGNC:19861]
94. PCDHA11 58 0.825 - - - - - 0.825 - - - - protocadherin alpha 11
95. SUPT20H ENSGALG00000017047 59 0.816 - - - - - 0.816 - - - - SPT20 homolog, SAGA complex component [Source:NCBI gene;Acc:418896]
96. ARSD ENSGALG00000016648 33 0.809 - - - - - 0.809 - - - - arylsulfatase D, transcript variant X1
97. CNKSR1 ENSGALG00000046299 195 0.803 - - - - - 0.803 - - - - connector enhancer of kinase suppressor of Ras 1 [Source:HGNC Symbol;Acc:HGNC:19700]
98. MPLKIP ENSGALG00000031294 65 0.802 - - - - - 0.802 - - - - M-phase specific PLK1 interacting protein [Source:HGNC Symbol;Acc:HGNC:16002]
99. LRRC39 ENSGALG00000005284 5 0.8 - - - - 0.800 - - - - - leucine rich repeat containing 39 [Source:HGNC Symbol;Acc:HGNC:28228]
100. ETV3 ENSGALG00000000669 7 0.8 - - - - 0.800 - - - - - ETS variant 3 [Source:HGNC Symbol;Acc:HGNC:3492]

There are 39 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA