Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SGMS1

Gene Name Gene ID Reads Annotation
SGMS1 ENSGALG00000003701 2459 sphingomyelin synthase 1 [Source:NCBI gene;Acc:378907]











Genes with expression patterns similar to SGMS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SGMS1 ENSGALG00000003701 2459 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sphingomyelin synthase 1 [Source:NCBI gene;Acc:378907]
2. STYXL1 ENSGALG00000001963 327 1.413 - - - - 0.707 - - - 0.706 - serine/threonine/tyrosine interacting like 1
3. MMEL1 ENSGALG00000001115 46 0.873 - - - - - - - 0.873 - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
4. PRNP ENSGALG00000000209 2159 0.845 - - - - - - - 0.845 - - prion protein [Source:NCBI gene;Acc:396452]
5. INPP4A ENSGALG00000029709 48 0.84 - - - - - - - 0.840 - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]
6. HDAC11 ENSGALG00000005092 176 0.837 - - - - - - - 0.837 - - histone deacetylase 11 [Source:NCBI gene;Acc:415978]
7. ICOS ENSGALG00000008656 27 0.836 - - - - - - - 0.836 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
8. SDE2 ENSGALG00000009253 739 0.836 - - - - - - - - 0.836 - SDE2 telomere maintenance homolog [Source:HGNC Symbol;Acc:HGNC:26643]
9. ZIC3 ENSGALG00000031144 863 0.834 - - - - - - - 0.834 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
10. C14H16ORF42 C14H16ORF42 263 0.834 - - - - - - - 0.834 - -
11. CD200R1A CD200R1A 105 0.831 - - - - - - - 0.831 - -
12. MAPT ENSGALG00000000625 659 0.831 - - - - - - - 0.831 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
13. PEX12 ENSGALG00000002151 953 0.831 - - - - - - - 0.831 - - peroxisomal biogenesis factor 12 [Source:HGNC Symbol;Acc:HGNC:8854]
14. KLRD1 ENSGALG00000014722 27 0.829 - - - - - - - 0.829 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
15. TMCO4 ENSGALG00000004081 31 0.828 - - - - - - - 0.828 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
16. APOAIV APOAIV 5 0.827 - - - - - - - 0.827 - -
17. GINS3 ENSGALG00000031209 32 0.827 - - - - - - - 0.827 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
18. CCDC96 9 0.827 - - - - - - - 0.827 - - coiled-coil domain containing 96
19. SDR42E2 ENSGALG00000006964 57 0.827 - - - - - - - 0.827 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
20. STAB1 21 0.827 - - - - - - - 0.827 - - stabilin 1, transcript variant X2
21. ENSGALG00000019053 ENSGALG00000019053 8 0.827 - - - - - - - 0.827 - -
22. FOXP4 ENSGALG00000033497 13 0.827 - - - - - - - 0.827 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
23. TRAF-5 TRAF-5 102 0.827 - - - - - - - 0.827 - -
24. USP53 ENSGALG00000011990 12 0.827 - - - - - - - 0.827 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
25. PLB1 PLB1 101 0.827 - - - - - - - 0.827 - -
26. LOC417973 ENSGALG00000019325 9 0.826 - - - - - - - 0.826 - - uncharacterized LOC417973, transcript variant X1
27. GFAP ENSGALG00000000909 21 0.826 - - - - - - - 0.826 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
28. CD4 ENSGALG00000014477 19 0.825 - - - - - - - 0.825 - - CD4 molecule [Source:NCBI gene;Acc:395362]
29. ANKRD44 ENSGALG00000007996 17 0.824 - - - - - - - 0.824 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
30. ABCA8 ENSGALG00000021399 11 0.824 - - - - - - - 0.824 - - ATP binding cassette subfamily A member 8
31. PHF21A ENSGALG00000008403 3090 0.823 - - - - - - - - 0.823 - PHD finger protein 21A [Source:NCBI gene;Acc:423199]
32. KRT20 ENSGALG00000019716 11 0.822 - - - - - - - 0.822 - - keratin 20 [Source:NCBI gene;Acc:420045]
33. PRKCE ENSGALG00000010000 99 0.821 - - - - - - - 0.821 - - protein kinase C epsilon, transcript variant X1
34. INA ENSGALG00000028238 208 0.821 - - - - - - - 0.821 - - internexin neuronal intermediate filament protein alpha
35. RIPK4 ENSGALG00000040189 102 0.821 - - - - - - - 0.821 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
36. PAK2 ENSGALG00000006426 283 0.821 - - - - - - - 0.821 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
37. KDR ENSGALG00000013907 869 0.82 - - - - - - - 0.820 - - kinase insert domain receptor [Source:NCBI gene;Acc:395323]
38. FAM219A ENSGALG00000005821 52 0.819 - - - - - - - 0.819 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
39. ZNFX1 ENSGALG00000004859 33 0.819 - - - - - - - 0.819 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
40. ADCYAP1R1 ENSGALG00000005223 114 0.818 - - - - - - - 0.818 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
41. AQP12 AQP12 11 0.817 - - - - - - - 0.817 - -
42. UCK1 ENSGALG00000003732 2325 0.816 - - - - - - - 0.816 - - uridine-cytidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:14859]
43. DNAI2 ENSGALG00000004495 45 0.816 - - - - - - - 0.816 - - dynein axonemal intermediate chain 2
44. ENSGALG00000019430 ENSGALG00000019430 32 0.814 - - - - - - - 0.814 - -
45. KIAA0513 ENSGALG00000025938 46 0.813 - - - - - - - 0.813 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
46. ARHGEF37 ENSGALG00000039652 28 0.812 - - - - - - - 0.812 - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
47. C1QTNF6 ENSGALG00000027067 493 0.812 - - - - - - - 0.812 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
48. ENPP3 ENSGALG00000037587 25 0.811 - - - - - - - 0.811 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
49. ABCC4 ENSGALG00000016896 154 0.811 - - - - - - - 0.811 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
50. EPB41L4A ENSGALG00000000234 113 0.811 - - - - - - - 0.811 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
51. PTPRD ENSGALG00000015058 37 0.809 - - - - - - - 0.809 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
52. IRG1 IRG1 21 0.808 - - - - - - - 0.808 - -
53. DZANK1 ENSGALG00000008731 120 0.808 - - - - - - - 0.808 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
54. RNASET2 ENSGALG00000011426 40 0.807 - - - - - - - 0.807 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
55. LCA5L ENSGALG00000016125 99 0.807 - - - - - - - 0.807 - - LCA5L, lebercilin like [Source:HGNC Symbol;Acc:HGNC:1255]
56. NRIP3 ENSGALG00000005903 58 0.806 - - - - - - - 0.806 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
57. HAVCR1 ENSGALG00000017362 25 0.805 - - - - - - - 0.805 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
58. NXPH2 ENSGALG00000029083 353 0.805 - - - - - - - 0.805 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
59. NCAPH2 228 0.804 - - - - - - - 0.804 - - non-SMC condensin II complex subunit H2, transcript variant X15
60. PRSS35 ENSGALG00000015847 52 0.803 - - - - - - - 0.803 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
61. SLC7A2 ENSGALG00000013627 58 0.803 - - - - - - - 0.803 - - solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
62. ACAP3 ENSGALG00000033293 605 0.802 - - - - - - - 0.802 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, transcript variant X6
63. ABCB7 ENSGALG00000007788 170 0.8 - - - - - - - 0.800 - - ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
64. PLK2 ENSGALG00000014725 1736 0.8 - - - - - - - 0.800 - - polo like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19699]
65. ENSGALG00000019522 ENSGALG00000019522 122 0.797 - - - - - - - 0.797 - -
66. GNA11 ENSGALG00000003238 732 0.793 - - - - - - - - 0.793 - G protein subunit alpha 11 [Source:NCBI gene;Acc:374077]
67. ENSGALG00000009044 ENSGALG00000009044 14492 0.79 - - - - - - - - 0.790 -
68. ENSGALG00000021882 ENSGALG00000021882 63 0.79 - - - - - - - 0.790 - -
69. LMO2 ENSGALG00000029892 4773 0.79 - - - - - - - 0.790 - - LIM domain only 2 [Source:NCBI gene;Acc:374129]
70. FURIN ENSGALG00000008341 2609 0.789 - - - - - - - 0.789 - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
71. MCTP2 ENSGALG00000030157 579 0.788 - - - - - - - - 0.788 - multiple C2 and transmembrane domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25636]
72. DDC ENSGALG00000013094 230 0.788 - - - - - 0.788 - - - - dopa decarboxylase [Source:HGNC Symbol;Acc:HGNC:2719]
73. LMOD1 ENSGALG00000028721 81 0.787 - - - - - - - 0.787 - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
74. SUZ12 ENSGALG00000003277 177 0.786 - - - - - - - 0.786 - - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
75. SMYD1 ENSGALG00000015935 75 0.786 - - - - - - - 0.786 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
76. ARHGAP25 ENSGALG00000035194 74 0.785 - - - - - - - 0.785 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
77. STXBP1 ENSGALG00000040003 157 0.784 - - - - - - - 0.784 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
78. TP53I3 ENSGALG00000016502 178 0.782 - - - - - - - 0.782 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
79. ARPC1B ENSGALG00000032588 2407 0.78 - - - - - - - 0.780 - - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
80. SPINK4 ENSGALG00000043964 50 0.778 - - - - - - - 0.778 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
81. PROS1 ENSGALG00000015409 3685 0.778 - - - - - - - 0.778 - - protein S [Source:HGNC Symbol;Acc:HGNC:9456]
82. ENSGALG00000023731 ENSGALG00000023731 149 0.777 - - - - - - - 0.777 - -
83. CDKN3 ENSGALG00000012220 41 0.771 - - - - - - - 0.771 - - cyclin dependent kinase inhibitor 3 [Source:NCBI gene;Acc:423562]
84. FAM19A3 75 0.771 - - - - - - - 0.771 - - family with sequence similarity 19 member A3, C-C motif chemokine like, transcript variant X2
85. IL4RA IL4RA 1237 0.769 - - - - - - - 0.769 - -
86. MAPK6 ENSGALG00000031448 28384 0.768 - - - - - - - - 0.768 - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
87. TPCN3 ENSGALG00000008198 124 0.768 - - - - - - - 0.768 - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
88. IRK1 IRK1 563 0.765 - - - - - - - 0.765 - -
89. CCNY ENSGALG00000007076 3921 0.765 - - - - - - - - 0.765 - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
90. SPAG9 ENSGALG00000034001 2314 0.764 - - - - - - - 0.764 - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
91. SMO ENSGALG00000036114 6559 0.763 - - - - - - - 0.763 - - smoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]
92. PER3 ENSGALG00000000573 590 0.763 - - - - - - - 0.763 - - period circadian clock 3 [Source:NCBI gene;Acc:419366]
93. KIAA1109 833 0.762 - - - - - - - - 0.762 - KIAA1109, transcript variant X11
94. MFI2 MFI2 1172 0.76 - - - - - - - 0.760 - -
95. REV3L ENSGALG00000015033 1917 0.76 - - - - - 0.760 - - - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
96. GFRA1 ENSGALG00000009173 371 0.759 - - - - - - - 0.759 - - GDNF family receptor alpha 1 [Source:NCBI gene;Acc:395994]
97. NPTN ENSGALG00000001741 481 0.759 - - - - - - - 0.759 - - neuroplastin [Source:NCBI gene;Acc:415316]
98. CUL3 ENSGALG00000005108 9571 0.758 - - - - - - - - 0.758 - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
99. RTN4RL2 ENSGALG00000032903 809 0.758 - - - - - - - 0.758 - - reticulon 4 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:23053]
100. LRRC40 ENSGALG00000011301 3409 0.757 - - - - - - - 0.757 - - leucine rich repeat containing 40 [Source:NCBI gene;Acc:424713]

There are 105 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA