Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SGCE

Gene Name Gene ID Reads Annotation
SGCE ENSGALG00000009670 3070 sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]











Genes with expression patterns similar to SGCE

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SGCE ENSGALG00000009670 3070 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
2. PDIA5 ENSGALG00000011689 6913 1.846 - - 0.864 - - - - 0.982 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
3. SHROOM2 ENSGALG00000030802 4517 1.811 - - 0.823 - - - - 0.988 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
4. ISCA1 ENSGALG00000012606 10342 1.797 - - 0.815 - - - - 0.982 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
5. RFC4 ENSGALG00000008703 5842 1.789 - - 0.845 - - - - 0.944 - - replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
6. MFF ENSGALG00000003079 5289 1.732 - - 0.744 - - - - 0.988 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
7. ITM2B ENSGALG00000016996 1112 1.706 - - 0.966 - - - - - 0.740 - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
8. UPF3B ENSGALG00000008618 12350 1.699 - - - - - - - 0.981 0.718 - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
9. PTP4A1 ENSGALG00000016271 23953 1.696 - - 0.722 - - - - 0.974 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
10. IFT81 ENSGALG00000003854 2534 1.675 - - 0.966 - - - - - 0.709 - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
11. TRIT1 ENSGALG00000003851 1518 1.67 - - 0.888 - - - - - 0.782 - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
12. AGFG1 ENSGALG00000003052 4766 1.668 - - 0.900 - - - - - 0.768 - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
13. SPINZ SPINZ 10341 1.66 - - - - - - 0.788 0.872 - -
14. FAM122A ENSGALG00000006127 9630 1.649 - - - - - - 0.704 0.945 - - family with sequence similarity 122A [Source:NCBI gene;Acc:422237]
15. HCFC2 ENSGALG00000029616 4525 1.646 - - 0.840 - - - - - 0.806 - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
16. CGNL1 ENSGALG00000004294 1177 1.624 - - 0.896 - - - - - 0.728 - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
17. OSBPL11 ENSGALG00000012059 2523 1.608 - - - - - - 0.712 - 0.896 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
18. METTL5 ENSGALG00000009676 3252 1.606 - - 0.873 - - - - - 0.733 - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
19. SMC4 ENSGALG00000009553 15715 1.599 - - 0.894 - - - 0.705 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
20. MARC1 ENSGALG00000009453 5675 1.589 - - 0.822 - - - 0.767 - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
21. ADNP ENSGALG00000007989 1930 1.511 - - 0.756 - - - - - 0.755 - activity dependent neuroprotector homeobox [Source:HGNC Symbol;Acc:HGNC:15766]
22. NHP2L1 NHP2L1 12124 1.506 - - 0.771 - - - 0.735 - - -
23. THAP5 ENSGALG00000009494 6540 1.506 - - 0.798 - - - 0.708 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
24. AKAP1 ENSGALG00000005575 12051 1.477 - - 0.735 - - - 0.742 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
25. GID8 ENSGALG00000005700 3992 1.458 - - 0.728 - - - - - 0.730 - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
26. ARFIP1 ENSGALG00000041361 7351 1.447 - - 0.717 - - - - - 0.730 - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
27. PDCD6 ENSGALG00000013400 7611 1.43 - - 0.726 - - - 0.704 - - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
28. WDR91 ENSGALG00000011724 5787 0.993 - - - - - - - 0.993 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
29. NOVA1 ENSGALG00000009850 7584 0.992 - - - - - - - 0.992 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
30. LGMN ENSGALG00000010811 7401 0.992 - - - - - - - 0.992 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
31. TLE3 ENSGALG00000008120 2655 0.992 - - - - - - - 0.992 - - transducin like enhancer of split 3, transcript variant X10
32. OTUD4 ENSGALG00000009968 3919 0.992 - - - - - - - 0.992 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
33. MRPS31 ENSGALG00000017033 9287 0.991 - - - - - - - 0.991 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
34. CCDC167 ENSGALG00000010151 3567 0.991 - - - - - - - 0.991 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
35. CAPZA1 ENSGALG00000001547 24242 0.991 - - - - - - - 0.991 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
36. LYRM4 ENSGALG00000027339 2917 0.991 - - - - - - - 0.991 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
37. TCTEX1D2 ENSGALG00000027722 2201 0.99 - - - - - - - 0.990 - - Tctex1 domain containing 2
38. TNPO3 ENSGALG00000039420 5178 0.99 - - - - - - - 0.990 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
39. ELMO2 ENSGALG00000007246 4569 0.99 - - - - - - - 0.990 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
40. RAB24 ENSGALG00000002984 6264 0.99 - - - - - - - 0.990 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
41. GOT2 ENSGALG00000002321 4961 0.99 - - - - - - - 0.990 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
42. POLR3H ENSGALG00000011947 2899 0.99 - - - - - - - 0.990 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
43. C26H6ORF106 C26H6ORF106 2168 0.99 - - - - - - - 0.990 - -
44. PRKAR2A ENSGALG00000007023 909 0.99 - - - - - - - 0.990 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
45. KPNA1 ENSGALG00000014426 2724 0.99 - - - - - - - 0.990 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
46. GNG10 ENSGALG00000015683 6905 0.99 - - - - - - - 0.990 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
47. PM20D1 ENSGALG00000000724 2108 0.99 - - - - - - - 0.990 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
48. B9D1 ENSGALG00000005096 760 0.99 - - - - - - - 0.990 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
49. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.989 - - - - - - - 0.989 - -
50. EPM2A ENSGALG00000012275 872 0.989 - - - - - - - 0.989 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
51. MRPS7 ENSGALG00000007999 5445 0.989 - - - - - - - 0.989 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
52. TNFRSF11B ENSGALG00000043167 911 0.989 - - - - - - - 0.989 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
53. EEFSEC ENSGALG00000038684 298 0.989 - - - - - - - 0.989 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
54. ARFGAP3 ENSGALG00000014140 4612 0.989 - - - - - - - 0.989 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
55. KCNK5 ENSGALG00000034077 3233 0.989 - - - - - - - 0.989 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
56. COL14A1 ENSGALG00000037675 2652 0.989 - - - - - - - 0.989 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
57. CLIP1 ENSGALG00000004467 1058 0.989 - - - - - - - 0.989 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
58. HHIP ENSGALG00000009948 1536 0.988 - - - - - - - 0.988 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
59. CEP192 ENSGALG00000035625 2270 0.988 - - - - - - - 0.988 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
60. BMP5 ENSGALG00000016293 2119 0.988 - - - - - - - 0.988 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
61. BRMS1L ENSGALG00000010093 4964 0.984 - - - - - - - 0.984 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
62. ATPAF1 ENSGALG00000010444 3677 0.981 - - - - - - - 0.981 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
63. SLC25A14 ENSGALG00000004063 5574 0.981 - - - - - - - 0.981 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
64. ENSGALG00000002595 ENSGALG00000002595 32163 0.98 - - - - - - - 0.980 - -
65. TRIM9 ENSGALG00000012367 1267 0.98 - - - - - - - 0.980 - - tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
66. SERPINH1 ENSGALG00000011214 15311 0.979 - - - - - - - 0.979 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
67. L3HYPDH ENSGALG00000012011 2212 0.978 - - - - - - - 0.978 - - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
68. TRMT10A ENSGALG00000012264 2467 0.978 - - - - - - - 0.978 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
69. RPB6 RPB6 9517 0.976 - - - - - - - 0.976 - -
70. ARID4A ENSGALG00000012037 8554 0.975 - - - - - - - 0.975 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
71. CYB5B ENSGALG00000000660 9733 0.974 - - - - - - - 0.974 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
72. OSGIN2 ENSGALG00000042840 83 0.974 - - 0.974 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
73. CAT ENSGALG00000030187 7534 0.973 - - - - - - - 0.973 - - catalase [Source:NCBI gene;Acc:423600]
74. NMD3 ENSGALG00000009533 8726 0.973 - - - - - - - 0.973 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
75. DBN1 ENSGALG00000033405 216 0.973 - - 0.973 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
76. ENSGALG00000004703 ENSGALG00000004703 112 0.972 - - 0.972 - - - - - - -
77. SMARCAD1 ENSGALG00000037339 149 0.972 - - 0.972 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
78. FBXL5 ENSGALG00000014510 245 0.972 - - 0.972 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
79. RAD54L2 ENSGALG00000003243 187 0.972 - - 0.972 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
80. CLEC16A ENSGALG00000007167 66 0.972 - - 0.972 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
81. ATP8B4 ENSGALG00000002326 456 0.971 - - 0.971 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
82. MLLT3 ENSGALG00000015078 502 0.971 - - 0.971 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
83. F2R ENSGALG00000014983 106 0.971 - - 0.971 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
84. ITGB4 ENSGALG00000002389 44 0.97 - - 0.970 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
85. TDRD6 48 0.97 - - 0.970 - - - - - - - tudor domain containing 6
86. RQCD1 RQCD1 110 0.97 - - 0.970 - - - - - - -
87. UEVLD ENSGALG00000006342 164 0.97 - - 0.970 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
88. TRIM13 ENSGALG00000017011 92 0.97 - - 0.970 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
89. FAM136A ENSGALG00000042163 39487 0.97 - - - - - - - 0.970 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
90. AASDHPPT ENSGALG00000027981 1017 0.97 - - 0.970 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
91. RPS6KB1 ENSGALG00000005198 169 0.97 - - 0.970 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
92. ENSGALG00000020103 ENSGALG00000020103 64 0.97 - - 0.970 - - - - - - -
93. U4 U4 69 0.97 - - 0.970 - - - - - - -
94. ENSGALG00000028964 ENSGALG00000028964 46 0.97 - - 0.970 - - - - - - -
95. AKAP10 ENSGALG00000004679 103 0.97 - - 0.970 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
96. MRC2 ENSGALG00000000461 48 0.97 - - 0.970 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
97. TCTN2 ENSGALG00000023683 3596 0.969 - - 0.969 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
98. MED12 ENSGALG00000036322 814 0.969 - - 0.969 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
99. SZT2 ENSGALG00000028561 255 0.969 - - 0.969 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
100. ABCE1 ENSGALG00000009961 958 0.969 - - 0.969 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]

There are 710 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA