Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SGCD

Gene Name Gene ID Reads Annotation
SGCD ENSGALG00000003886 27 sarcoglycan delta [Source:HGNC Symbol;Acc:HGNC:10807]











Genes with expression patterns similar to SGCD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SGCD ENSGALG00000003886 27 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 sarcoglycan delta [Source:HGNC Symbol;Acc:HGNC:10807]
2. PTPLA PTPLA 43 1.733 - - 0.950 - - - - - - 0.783
3. SLC45A3 ENSGALG00000000703 85 1.689 - - - - - - - 0.879 - 0.810 solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
4. ENSGALG00000015321 ENSGALG00000015321 18 1.629 - - 0.812 - - 0.817 - - - -
5. GNB4 ENSGALG00000008983 26 1.621 - - - - - - - 0.916 - 0.705 G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
6. CHSY1 ENSGALG00000026468 4 1.534 - - 0.717 - - 0.817 - - - - chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
7. KIF26B ENSGALG00000010664 41 1.523 - - 0.778 - - - - - - 0.745 kinesin family member 26B [Source:HGNC Symbol;Acc:HGNC:25484]
8. PLAGL2 ENSGALG00000006586 3 1 - - 1.000 - - - - - - - PLAG1 like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:9047]
9. LOC427654 ENSGALG00000021286 1 1 - - 1.000 - - - - - - - parvalbumin beta-like, transcript variant X2
10. CAD19 CAD19 17 1 - - 1.000 - - - - - - -
11. GHRHR ENSGALG00000005212 1 1 - - 1.000 - - - - - - - growth hormone releasing hormone receptor [Source:NCBI gene;Acc:420385]
12. LOC415478 ENSGALG00000021171 100 1 - - 1.000 - - - - - - - transmembrane protein 2-like, transcript variant X2
13. ZBTB44 ENSGALG00000001341 3 1 - - 1.000 - - - - - - - zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
14. MSMB ENSGALG00000043909 1 1 - - 1.000 - - - - - - - microseminoprotein, beta-
15. ENSGALG00000028428 ENSGALG00000028428 3 1 - - 1.000 - - - - - - -
16. VILL ENSGALG00000005763 4 1 - - 1.000 - - - - - - - villin like [Source:HGNC Symbol;Acc:HGNC:30906]
17. NOX2 NOX2 2 1 - - 1.000 - - - - - - -
18. ZAN ZAN 2 1 - - 1.000 - - - - - - -
19. WIPF3 ENSGALG00000011170 2 1 - - 1.000 - - - - - - - WAS/WASL interacting protein family member 3 [Source:HGNC Symbol;Acc:HGNC:22004]
20. KNG1 ENSGALG00000046159 17 1 - - 1.000 - - - - - - - kininogen 1 [Source:HGNC Symbol;Acc:HGNC:6383]
21. ENSGALG00000000979 ENSGALG00000000979 3 1 - - 1.000 - - - - - - -
22. PRSS3 ENSGALG00000039545 1 1 - - 1.000 - - - - - - - protease, serine 3 [Source:NCBI gene;Acc:396345]
23. GHRHR-LR ENSGALG00000005242 2 1 - - 1.000 - - - - - - - growth-hormone releasing hormone-like peptide receptor
24. CD28 ENSGALG00000008669 2 1 - - 1.000 - - - - - - - CD28 molecule [Source:NCBI gene;Acc:396249]
25. ENSGALG00000015104 ENSGALG00000015104 1 1 - - 1.000 - - - - - - -
26. GPATCH2L ENSGALG00000010350 8 1 - - - - - 1.000 - - - - G-patch domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:20210]
27. LOC112533211 ENSGALG00000002102 1 1 - - 1.000 - - - - - - - uncharacterized LOC112533211
28. TRPC3 ENSGALG00000011875 9 1 - - 1.000 - - - - - - - transient receptor potential cation channel subfamily C member 3 [Source:NCBI gene;Acc:374153]
29. GFRAL ENSGALG00000016296 4 1 - - 1.000 - - - - - - - GDNF family receptor alpha like [Source:HGNC Symbol;Acc:HGNC:32789]
30. ENSGALG00000019367 ENSGALG00000019367 2 1 - - 1.000 - - - - - - -
31. LACC1 ENSGALG00000016969 1 1 - - 1.000 - - - - - - - LACC1 laccase domain containing 1, transcript variant X6
32. PLGL ENSGALG00000028886 3 1 - - 1.000 - - - - - - - plasminogen-like
33. C14orf166B C14orf166B 4 1 - - 1.000 - - - - - - -
34. F11 ENSGALG00000013571 1 1 - - 1.000 - - - - - - - coagulation factor XI [Source:HGNC Symbol;Acc:HGNC:3529]
35. GRM2 ENSGALG00000003839 1 1 - - 1.000 - - - - - - - glutamate metabotropic receptor 2 [Source:HGNC Symbol;Acc:HGNC:4594]
36. TXK ENSGALG00000014127 6 1 - - 1.000 - - - - - - - TXK tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:12434]
37. FAM109A 6 1 - - 1.000 - - - - - - - family with sequence similarity 109 member A
38. ENSGALG00000028857 ENSGALG00000028857 1 1 - - 1.000 - - - - - - -
39. AGPAT4 ENSGALG00000011571 4 1 - - 1.000 - - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:20885]
40. IP3KA IP3KA 4 1 - - 1.000 - - - - - - -
41. ENSGALG00000026109 ENSGALG00000026109 2 1 - - 1.000 - - - - - - -
42. SIX2 ENSGALG00000023303 2 1 - - 1.000 - - - - - - - SIX homeobox 2 [Source:NCBI gene;Acc:724086]
43. COL20A1 ENSGALG00000005797 1 1 - - 1.000 - - - - - - - collagen type XX alpha 1 chain [Source:NCBI gene;Acc:419243]
44. ILDR2 ENSGALG00000015458 16 1 - - 1.000 - - - - - - - immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
45. ENSGALG00000028021 ENSGALG00000028021 1 1 - - 1.000 - - - - - - -
46. GPR133 GPR133 1 1 - - 1.000 - - - - - - -
47. GPR83 ENSGALG00000017212 6 1 - - 1.000 - - - - - - - G protein-coupled receptor 83 [Source:NCBI gene;Acc:428093]
48. ENSGALG00000001629 ENSGALG00000001629 31 1 - - 1.000 - - - - - - -
49. ARSE ENSGALG00000016654 8 1 - - - - - 1.000 - - - - arylsulfatase E (chondrodysplasia punctata 1), transcript variant X2
50. PGBD5 ENSGALG00000011111 1 1 - - 1.000 - - - - - - - piggyBac transposable element derived 5 [Source:HGNC Symbol;Acc:HGNC:19405]
51. ITIH5 ENSGALG00000006891 2 1 - - 1.000 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family member 5 [Source:HGNC Symbol;Acc:HGNC:21449]
52. EXOC6B ENSGALG00000016098 3 1 - - 1.000 - - - - - - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
53. MYH1B ENSGALG00000039977 3 1 - - 1.000 - - - - - - - myosin, heavy chain 1B, skeletal muscle [Source:NCBI gene;Acc:374069]
54. CNTFR ENSGALG00000028140 2 1 - - 1.000 - - - - - - - ciliary neurotrophic factor receptor [Source:NCBI gene;Acc:395885]
55. CASKIN2 ENSGALG00000008034 3 1 - - 1.000 - - - - - - - CASK interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:18200]
56. RBL2 ENSGALG00000003663 10 0.994 - - 0.994 - - - - - - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
57. ENSGALG00000001720 ENSGALG00000001720 10 0.979 - - 0.979 - - - - - - -
58. NPHS2 ENSGALG00000004163 850 0.967 - - 0.967 - - - - - - - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
59. DISP2 ENSGALG00000031266 5 0.962 - - 0.962 - - - - - - - dispatched RND transporter family member 2 [Source:HGNC Symbol;Acc:HGNC:19712]
60. MANSC4 32 0.961 - - - - - 0.961 - - - - MANSC domain containing 4, transcript variant X1
61. DDO ENSGALG00000015057 25 0.947 - - 0.947 - - - - - - - D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
62. PCOLCE2 ENSGALG00000002623 8 0.947 - - 0.947 - - - - - - - procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
63. METTL24 ENSGALG00000041120 60 0.947 - - 0.947 - - - - - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
64. STAT4 ENSGALG00000033087 7 0.943 - - 0.943 - - - - - - - signal transducer and activator of transcription 4 [Source:NCBI gene;Acc:768406]
65. EPAS1 ENSGALG00000010005 14 0.936 - - 0.936 - - - - - - - endothelial PAS domain protein 1 [Source:NCBI gene;Acc:395596]
66. VTG1 ENSGALG00000039354 17 0.932 - - 0.932 - - - - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
67. TTR ENSGALG00000015143 9764 0.931 - - - - - - - - - 0.931 transthyretin [Source:NCBI gene;Acc:396277]
68. IKZF1 ENSGALG00000013086 58 0.93 - - 0.930 - - - - - - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
69. COL3A1 ENSGALG00000035584 39 0.925 - - - - - - - - - 0.925 collagen type III alpha 1 chain [Source:NCBI gene;Acc:396340]
70. SCEL ENSGALG00000027514 313 0.923 - - - - 0.923 - - - - - sciellin, transcript variant X5
71. RECQL5 ENSGALG00000002424 16 0.921 - - - - - - - - - 0.921 RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
72. EPHA2 ENSGALG00000039895 12 0.921 - - 0.921 - - - - - - - EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]
73. ABRA ENSGALG00000041043 16 0.919 - - 0.919 - - - - - - - actin binding Rho activating protein [Source:HGNC Symbol;Acc:HGNC:30655]
74. SV2C ENSGALG00000014967 7 0.918 - - 0.918 - - - - - - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
75. TBC1D20 ENSGALG00000006201 6 0.918 - - 0.918 - - - - - - - TBC1 domain family member 20 [Source:HGNC Symbol;Acc:HGNC:16133]
76. MOGAT1 ENSGALG00000005217 12 0.918 - - 0.918 - - - - - - - monoacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:18210]
77. TPBG ENSGALG00000027355 4 0.917 - - 0.917 - - - - - - - trophoblast glycoprotein [Source:HGNC Symbol;Acc:HGNC:12004]
78. EFCAB4A EFCAB4A 12 0.916 - - - - - - - 0.916 - -
79. ATMIN ENSGALG00000040475 16 0.916 - - - - - - - 0.916 - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
80. RNaseP RNaseP 30 0.916 - - - - - - - 0.916 - -
81. IL1RAP ENSGALG00000007253 6 0.916 - - - - - - - 0.916 - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
82. HFM1 ENSGALG00000006091 5 0.916 - - - - - - - 0.916 - - HFM1, ATP dependent DNA helicase homolog [Source:HGNC Symbol;Acc:HGNC:20193]
83. GPRC5B ENSGALG00000002028 28 0.916 - - - - - - - 0.916 - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
84. ENSGALG00000019672 ENSGALG00000019672 18 0.916 - - - - - - - 0.916 - -
85. NDST4 ENSGALG00000012015 43 0.916 - - - - - - - 0.916 - - N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]
86. TSNAXIP1 ENSGALG00000001533 9 0.916 - - - - - - - 0.916 - - translin associated factor X interacting protein 1, transcript variant X2
87. ST8SIA6 ENSGALG00000008671 8 0.916 - - - - - - - 0.916 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
88. ENSGALG00000002493 ENSGALG00000002493 2 0.916 - - - - - - - 0.916 - -
89. CBL ENSGALG00000029077 6 0.916 - - - - - - - 0.916 - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
90. ARNTL ENSGALG00000005378 19 0.914 - - - - - - - 0.914 - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
91. DENND4C ENSGALG00000015083 25 0.914 - - - - - - - 0.914 - - DENN domain containing 4C [Source:HGNC Symbol;Acc:HGNC:26079]
92. SLC40A1 ENSGALG00000043618 16 0.91 - - - - - - - 0.910 - - solute carrier family 40 member 1 [Source:NCBI gene;Acc:423984]
93. REG4 ENSGALG00000002931 4 0.91 - - - - - - - 0.910 - - regenerating family member 4 [Source:NCBI gene;Acc:424379]
94. SUSD4 ENSGALG00000009388 48 0.91 - - - - - - - 0.910 - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
95. SASH3 ENSGALG00000032530 126 0.909 - - - - - - - 0.909 - - SAM and SH3 domain containing 3 [Source:NCBI gene;Acc:422138]
96. RUNX2 ENSGALG00000040276 499 0.909 - - 0.909 - - - - - - - runt related transcription factor 2 [Source:NCBI gene;Acc:373919]
97. GLB1 ENSGALG00000040028 207 0.907 - - - - - - - 0.907 - - galactosidase beta 1 [Source:NCBI gene;Acc:420720]
98. ZNF516 ENSGALG00000013660 34 0.907 - - - - - - - 0.907 - - zinc finger protein 516 [Source:HGNC Symbol;Acc:HGNC:28990]
99. GP9 GP9 6 0.905 - - 0.905 - - - - - - -
100. WNT7B ENSGALG00000036255 3343 0.905 - - - - - 0.905 - - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]

There are 288 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA