Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SGCB

Gene Name Gene ID Reads Annotation
SGCB ENSGALG00000013968 3214 sarcoglycan beta [Source:NCBI gene;Acc:422760]











Genes with expression patterns similar to SGCB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SGCB ENSGALG00000013968 3214 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sarcoglycan beta [Source:NCBI gene;Acc:422760]
2. PSMC3 ENSGALG00000008108 22922 1.671 - - - - - - 0.771 0.900 - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
3. ENSGALG00000002903 ENSGALG00000002903 18304 1.635 - - - - - - 0.778 0.857 - -
4. MAN2A1 ENSGALG00000000255 4543 1.552 - - - - - - 0.719 0.833 - - mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
5. GPR125 GPR125 2753 1.427 - - - - 0.711 - 0.716 - - -
6. NCAPG2 ENSGALG00000006525 2319 0.998 - - - - - - - 0.998 - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
7. CENPJ ENSGALG00000017148 1415 0.998 - - - - - - - 0.998 - - centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
8. RNF19B ENSGALG00000039716 662 0.998 - - - - - - - 0.998 - - ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
9. AKAP2 ENSGALG00000015656 4310 0.997 - - - - - - - 0.997 - - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
10. GTF2H3 ENSGALG00000023682 9914 0.997 - - - - - - - 0.997 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
11. SETD9 ENSGALG00000014719 5081 0.997 - - - - - - - 0.997 - - SET domain containing 9, transcript variant X2
12. AMACR ENSGALG00000003326 2657 0.997 - - - - - - - 0.997 - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
13. FRAS1 ENSGALG00000010316 5008 0.997 - - - - - - - 0.997 - - Fraser extracellular matrix complex subunit 1, transcript variant X2
14. QSOX2 ENSGALG00000001758 638 0.997 - - - - - - - 0.997 - - quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]
15. CNTRL ENSGALG00000001513 1773 0.997 - - - - - - - 0.997 - - centriolin [Source:NCBI gene;Acc:417121]
16. REPS2 ENSGALG00000016545 3347 0.997 - - - - - - - 0.997 - - RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
17. VPRBP VPRBP 4037 0.997 - - - - - - - 0.997 - -
18. BYSL ENSGALG00000003467 7555 0.997 - - - - - - - 0.997 - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
19. LAMA5 486 0.997 - - - - - - - 0.997 - - laminin subunit alpha 5, transcript variant X3
20. ZNF318 ENSGALG00000034040 1758 0.997 - - - - - - - 0.997 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
21. ACTA1 ENSGALG00000011086 2543 0.997 - - - - - - - 0.997 - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
22. TUBD1 ENSGALG00000005173 1364 0.997 - - - - - - - 0.997 - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
23. RPAIN ENSGALG00000001666 2676 0.997 - - - - - - - 0.997 - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
24. TLCD2 ENSGALG00000021592 1166 0.996 - - - - - - - 0.996 - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
25. WDHD1 ENSGALG00000012199 3570 0.996 - - - - - - - 0.996 - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
26. STX8 ENSGALG00000001238 7403 0.996 - - - - - - - 0.996 - - syntaxin 8 [Source:NCBI gene;Acc:417321]
27. ANKRD46 ENSGALG00000041445 3791 0.996 - - - - - - - 0.996 - - ankyrin repeat domain 46, transcript variant X1
28. EDNRA ENSGALG00000010013 2472 0.995 - - - - - - - 0.995 - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
29. NQO2 ENSGALG00000025747 2287 0.995 - - - - - - - 0.995 - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
30. LIMCH1 ENSGALG00000014258 1987 0.995 - - - - - - - 0.995 - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
31. TAPA1 TAPA1 8669 0.995 - - - - - - - 0.995 - -
32. EVX1 ENSGALG00000037310 1974 0.994 - - - - - - - 0.994 - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
33. SUPV3L1 ENSGALG00000004197 4141 0.994 - - - - - - - 0.994 - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
34. GTF2A1 ENSGALG00000010576 4570 0.994 - - - - - - - 0.994 - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
35. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 0.994 - - - - - - - 0.994 - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
36. NAP1L1 ENSGALG00000010238 14506 0.993 - - - - - - - 0.993 - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
37. MON2 ENSGALG00000009795 3868 0.993 - - - - - - - 0.993 - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:NCBI gene;Acc:417818]
38. GPR27 ENSGALG00000027091 8111 0.993 - - - - - - - 0.993 - - G protein-coupled receptor 27
39. ERBB2IP ERBB2IP 5800 0.993 - - - - - - - 0.993 - -
40. BMS1 ENSGALG00000002624 8339 0.993 - - - - - - - 0.993 - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
41. MRPS35 ENSGALG00000036730 6327 0.988 - - - - - - - 0.988 - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
42. GNG2 ENSGALG00000027629 9404 0.985 - - - - - - - 0.985 - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
43. ACSF2 ENSGALG00000019768 2727 0.984 - - - - - - - 0.984 - - acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
44. SOS1 ENSGALG00000039450 3941 0.983 - - - - - - - 0.983 - - SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
45. AMD1 ENSGALG00000039575 8900 0.983 - - - - - - - 0.983 - - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
46. MRE11A MRE11A 5754 0.981 - - - - - - - 0.981 - -
47. MRPS11 ENSGALG00000006777 16009 0.98 - - - - - - - 0.980 - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
48. SERPINE2 ENSGALG00000005135 16108 0.98 - - - - - - - 0.980 - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
49. AP1B1 ENSGALG00000042213 4828 0.977 - - - - - - - 0.977 - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
50. CTNNA1 ENSGALG00000002447 22379 0.97 - - - - - - - 0.970 - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
51. IST1 ENSGALG00000000811 10527 0.969 - - - - - - - 0.969 - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
52. COPS2 ENSGALG00000000404 8980 0.96 - - - - - - - 0.960 - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
53. RAD23B ENSGALG00000015540 10828 0.957 - - - - - - - 0.957 - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
54. C9orf78 ENSGALG00000004152 7140 0.946 - - - - - - - 0.946 - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
55. MPHOSPH8 ENSGALG00000017145 6280 0.945 - - - - - - - 0.945 - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
56. ACE ENSGALG00000000498 1398 0.943 - - - - - - - 0.943 - - angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
57. HNRNPH1 HNRNPH1 8819 0.931 - - - - - - - 0.931 - -
58. PSPC1 ENSGALG00000017142 13036 0.928 - - - - - - - 0.928 - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
59. ANKRD10 ENSGALG00000030125 3611 0.927 - - - - - - - 0.927 - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
60. SNX9 ENSGALG00000013710 5295 0.919 - - - - - - - 0.919 - - sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
61. MND1 ENSGALG00000009212 11765 0.917 - - - - - - - 0.917 - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
62. MOXD1 ENSGALG00000002911 8523 0.915 - - - - - - - 0.915 - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
63. MAB21L1 ENSGALG00000045052 1677 0.913 - - - - - - - 0.913 - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
64. NHP2L1 NHP2L1 12124 0.913 - - - - - - - 0.913 - -
65. EXOSC3 ENSGALG00000002426 7255 0.905 - - - - - - - 0.905 - - exosome component 3 [Source:NCBI gene;Acc:423626]
66. ENSGALG00000014852 ENSGALG00000014852 15288 0.904 - - - - - - - 0.904 - -
67. MBNL3 ENSGALG00000032045 10980 0.904 - - - - - - - 0.904 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
68. Sep-05 Sep-05 5887 0.903 - - - - - - - 0.903 - -
69. DDX18 ENSGALG00000012147 12463 0.895 - - - - - - - 0.895 - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
70. POLE3 ENSGALG00000008873 9161 0.891 - - - - - - - 0.891 - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
71. GPI ENSGALG00000004956 40030 0.888 - - - - - - - 0.888 - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
72. ACTR2 ENSGALG00000008779 17812 0.883 - - - - - - - 0.883 - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
73. DGCR6 ENSGALG00000027369 7882 0.87 - - - - - - - 0.870 - - DiGeorge syndrome critical region gene 6 [Source:NCBI gene;Acc:395907]
74. TSNAX ENSGALG00000037177 3246 0.862 - - - - - - - 0.862 - - translin associated factor X [Source:NCBI gene;Acc:421526]
75. PTEN ENSGALG00000003634 5048 0.858 - - - - - - - 0.858 - - phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
76. PPP2CA ENSGALG00000006462 26306 0.853 - - - - - - - 0.853 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
77. TSPAN3 ENSGALG00000002774 28811 0.852 - - - - - - - 0.852 - - tetraspanin 3 [Source:NCBI gene;Acc:415348]
78. CHST6 ENSGALG00000000913, ENSGALG00000036545 7526 0.849 - - - - - - - 0.849 - - carbohydrate sulfotransferase 6 [Source:NCBI gene;Acc:770257]
79. WDFY2 ENSGALG00000017019 2384 0.831 - - - - - - - 0.831 - - WD repeat and FYVE domain containing 2 [Source:NCBI gene;Acc:770107]
80. NOC3L ENSGALG00000035667 7441 0.829 - - - - - - - 0.829 - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
81. BLOC1S5 ENSGALG00000012782 5885 0.827 - - - - - - 0.827 - - - biogenesis of lysosomal organelles complex 1 subunit 5 [Source:NCBI gene;Acc:420866]
82. SELK SELK 15022 0.822 - - - - - - - 0.822 - -
83. NDUFS8 ENSGALG00000040173 24745 0.82 - - - - - - - 0.820 - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
84. PDDC1 5179 0.805 - - - - - - 0.805 - - - Parkinson disease 7 domain containing 1, transcript variant X6
85. GPHN ENSGALG00000009587 3045 0.805 - - - - - - 0.805 - - - gephyrin [Source:NCBI gene;Acc:428878]
86. WDR51B WDR51B 5757 0.803 - - - - - - - 0.803 - -
87. COPB1 ENSGALG00000006015 16518 0.8 - - - - - - - 0.800 - - coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]
88. MRPS10 ENSGALG00000009890 9157 0.798 - - - - - - - 0.798 - - mitochondrial ribosomal protein S10 [Source:NCBI gene;Acc:421385]
89. ALKBH1 ENSGALG00000010485 1828 0.798 - - - - - - 0.798 - - - alkB homolog 1, histone H2A dioxygenase [Source:NCBI gene;Acc:428898]
90. DPP7 ENSGALG00000038145 4888 0.796 - - - - 0.796 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
91. USP32 ENSGALG00000005350 1686 0.795 - - - - 0.795 - - - - - ubiquitin specific peptidase 32, transcript variant X2
92. CCNG2 ENSGALG00000010347 9122 0.794 - - - - 0.794 - - - - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
93. NUPL1 NUPL1 8197 0.789 - - - - - - 0.789 - - -
94. ACP6 ENSGALG00000015485 3147 0.788 - - - - 0.788 - - - - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
95. RUVBL1 ENSGALG00000005931 9379 0.785 - - - - - - 0.785 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
96. SP3 ENSGALG00000031796 8997 0.784 - - - - - - - 0.784 - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
97. TBC1D22A ENSGALG00000043058 1614 0.78 - - - - - - 0.780 - - - TBC1 domain family member 22A [Source:NCBI gene;Acc:428128]
98. CRABP-I ENSGALG00000003193 67258 0.78 - - - - - - - 0.780 - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
99. ABCF2 ENSGALG00000034573 15639 0.778 - - - - - - - 0.778 - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
100. ARHGAP11A ENSGALG00000009731 6817 0.778 - - - - - - 0.778 - - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]

There are 231 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA