Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SFXN3

Gene Name Gene ID Reads Annotation
SFXN3 ENSGALG00000023621 2957 sideroflexin 3 [Source:HGNC Symbol;Acc:HGNC:16087]











Genes with expression patterns similar to SFXN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SFXN3 ENSGALG00000023621 2957 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sideroflexin 3 [Source:HGNC Symbol;Acc:HGNC:16087]
2. MDFIC ENSGALG00000026838 3881 1.735 - - - - 0.940 - 0.795 - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
3. TMEM184C ENSGALG00000010019 7856 1.731 - - - - 0.947 - 0.784 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
4. NUPL1 NUPL1 8197 1.71 - - - - 0.920 - 0.790 - - -
5. AN1ZNF5L ENSGALG00000014589 21148 1.71 - - - - 0.881 - 0.829 - - - AN1-type zinc finger protein 5-like, transcript variant X2
6. BRMS1L ENSGALG00000010093 4964 1.663 - - - - 0.938 - 0.725 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
7. RUVBL1 ENSGALG00000005931 9379 1.657 - - - - 0.917 - 0.740 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
8. MPRIP ENSGALG00000004798 6700 1.645 - - - - 0.933 - - 0.712 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
9. ILF2 ENSGALG00000011570 23050 1.605 - - - - 0.857 - 0.748 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
10. METAP2 ENSGALG00000011377 16311 1.567 - - - - 0.853 - 0.714 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
11. FKBP12 FKBP12 64317 1.505 - - - - 0.793 - 0.712 - - -
12. MYBBP1A ENSGALG00000001363 10331 0.955 - - - - 0.955 - - - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
13. MKKS ENSGALG00000009013 9301 0.954 - - - - 0.954 - - - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
14. DAP ENSGALG00000013002 6815 0.952 - - - - 0.952 - - - - - death associated protein [Source:NCBI gene;Acc:420923]
15. ITPA ENSGALG00000003250 7722 0.952 - - - - 0.952 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
16. PDHB ENSGALG00000029576 12254 0.952 - - - - 0.952 - - - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
17. NQO2 ENSGALG00000025747 2287 0.951 - - - - 0.951 - - - - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
18. PLS3 ENSGALG00000005930 12625 0.951 - - - - 0.951 - - - - - plastin 3 [Source:NCBI gene;Acc:422222]
19. TEL TEL 1231 0.948 - - - - 0.948 - - - - -
20. MAPKAPK2 ENSGALG00000000883 6174 0.948 - - - - 0.948 - - - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
21. CRCP ENSGALG00000002587 8809 0.948 - - - - 0.948 - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
22. REXO5 ENSGALG00000002239 2466 0.948 - - - - 0.948 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
23. DNAJA1 ENSGALG00000023066 3820 0.948 - - - - 0.948 - - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
24. TAF13 ENSGALG00000015185 11410 0.946 - - - - 0.946 - - - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
25. PEX2 ENSGALG00000035752 4427 0.946 - - - - 0.946 - - - - - peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
26. OGFOD3 ENSGALG00000001618 2438 0.946 - - - - 0.946 - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
27. ADPGK ENSGALG00000001788 208 0.946 - - - - 0.946 - - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
28. ATP5J 14451 0.946 - - - - 0.946 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
29. FANCM ENSGALG00000031182 1030 0.946 - - - - 0.946 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
30. KIAA1524 ENSGALG00000015360 3527 0.946 - - - - 0.946 - - - - - KIAA1524 [Source:NCBI gene;Acc:418410]
31. CCDC58 ENSGALG00000014413 9022 0.945 - - - - 0.945 - - - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
32. FZD6 ENSGALG00000030626 3336 0.945 - - - - 0.945 - - - - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
33. ZBTB8OS ENSGALG00000003517 2436 0.945 - - - - 0.945 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
34. Sep-11 Sep-11 2005 0.945 - - - - 0.945 - - - - -
35. ALDH18A1 ENSGALG00000034655 3038 0.945 - - - - 0.945 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
36. EXOSC3 ENSGALG00000002426 7255 0.945 - - - - 0.945 - - - - - exosome component 3 [Source:NCBI gene;Acc:423626]
37. AP1S3 ENSGALG00000005171 2981 0.945 - - - - 0.945 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
38. TXNDC11 ENSGALG00000003154 2224 0.945 - - - - 0.945 - - - - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
39. SLC25A24 ENSGALG00000001938 3671 0.945 - - - - 0.945 - - - - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
40. LOC770492 ENSGALG00000027778 695 0.944 - - - - 0.944 - - - - - ras-related and estrogen-regulated growth inhibitor-like
41. ERICH1 ENSGALG00000031021 1495 0.944 - - - - 0.944 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
42. DRD2 ENSGALG00000007794 399 0.944 - - - - 0.944 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
43. BBS2 ENSGALG00000042415 1816 0.944 - - - - 0.944 - - - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
44. CCNK ENSGALG00000011138 6416 0.944 - - - - 0.944 - - - - - cyclin K [Source:NCBI gene;Acc:423446]
45. CALCA CALCA 682 0.943 - - - - 0.943 - - - - -
46. MICALL1 ENSGALG00000012265 3753 0.943 - - - - 0.943 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
47. RAB23 ENSGALG00000016279 597 0.943 - - - - 0.943 - - - - - ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
48. KLF3 ENSGALG00000041717 2787 0.943 - - - - 0.943 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
49. COQ3 ENSGALG00000015486 3508 0.942 - - - - 0.942 - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
50. DLGAP5 ENSGALG00000012165 2406 0.942 - - - - 0.942 - - - - - DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]
51. IL4RA IL4RA 1237 0.942 - - - - 0.942 - - - - -
52. RNF207 2949 0.942 - - - - 0.942 - - - - - ring finger protein 207, transcript variant X1
53. DAP3 ENSGALG00000019796 13278 0.941 - - - - 0.941 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
54. TMX4 ENSGALG00000028587 3513 0.941 - - - - 0.941 - - - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
55. ENSGALG00000004283 ENSGALG00000004283 4771 0.941 - - - - 0.941 - - - - -
56. METTL25 1538 0.941 - - - - 0.941 - - - - - methyltransferase like 25, transcript variant X1
57. ZNF318 ENSGALG00000034040 1758 0.941 - - - - 0.941 - - - - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
58. SMC6 ENSGALG00000016467 3321 0.941 - - - - 0.941 - - - - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
59. PRKCD ENSGALG00000002016 1476 0.94 - - - - 0.940 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
60. RASA2 ENSGALG00000002850 2231 0.94 - - - - 0.940 - - - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
61. ROCK1 ENSGALG00000014922 4020 0.939 - - - - 0.939 - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
62. ALDH4A1 ENSGALG00000042184 9432 0.939 - - - - 0.939 - - - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
63. TCERG1L ENSGALG00000010470 490 0.939 - - - - 0.939 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
64. CGT CGT 948 0.939 - - - - 0.939 - - - - -
65. COG6 ENSGALG00000017035 2777 0.938 - - - - 0.938 - - - - - component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
66. SLC25A15 ENSGALG00000017032 6773 0.938 - - - - 0.938 - - - - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
67. RPAP3 ENSGALG00000009743 3380 0.938 - - - - 0.938 - - - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
68. TMEM203 ENSGALG00000008925 3033 0.937 - - - - 0.937 - - - - - transmembrane protein 203 [Source:HGNC Symbol;Acc:HGNC:28217]
69. SPSB1 ENSGALG00000002506 2205 0.937 - - - - 0.937 - - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:30628]
70. TMEM97 ENSGALG00000005702 2037 0.937 - - - - 0.937 - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
71. ARPP21 ENSGALG00000043240 2403 0.936 - - - - 0.936 - - - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
72. IFT172 ENSGALG00000016509 1226 0.936 - - - - 0.936 - - - - - intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
73. DHX33 ENSGALG00000001630 7783 0.936 - - - - 0.936 - - - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
74. VCPKMT ENSGALG00000012269 2107 0.935 - - - - 0.935 - - - - - valosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]
75. CORO2B ENSGALG00000008043 2683 0.935 - - - - 0.935 - - - - - coronin 2B [Source:HGNC Symbol;Acc:HGNC:2256]
76. TIMM10 ENSGALG00000004845 31395 0.934 - - - - 0.934 - - - - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
77. NDUFA4 ENSGALG00000025999 53323 0.934 - - - - 0.934 - - - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
78. DNAJC25 ENSGALG00000015684 4554 0.933 - - - - 0.933 - - - - - DnaJ heat shock protein family (Hsp40) member C25
79. APPBP2 ENSGALG00000005314 6447 0.932 - - - - 0.932 - - - - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
80. C19orf70 ENSGALG00000026847 19315 0.932 - - - - 0.932 - - - - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
81. ROMO1 ENSGALG00000027416 9560 0.932 - - - - 0.932 - - - - - reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
82. UTP3 ENSGALG00000011553 8814 0.932 - - - - 0.932 - - - - - UTP3, small subunit processome component homolog (S. cerevisiae)
83. GLI2 ENSGALG00000011630 3347 0.932 - - - - 0.932 - - - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
84. TTC37 ENSGALG00000014670 5715 0.931 - - - - 0.931 - - - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
85. DCAF12 ENSGALG00000005800 6419 0.931 - - - - 0.931 - - - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
86. DPCD ENSGALG00000007731 7225 0.93 - - - - 0.930 - - - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:NCBI gene;Acc:423852]
87. COPG COPG 6949 0.93 - - - - 0.930 - - - - -
88. PLA2G12A ENSGALG00000012185 5261 0.93 - - - - 0.930 - - - - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
89. ATAD5 ENSGALG00000003294 4830 0.93 - - - - 0.930 - - - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
90. ITM2A ENSGALG00000004107 29262 0.93 - - - - 0.930 - - - - - integral membrane protein 2A [Source:NCBI gene;Acc:422145]
91. TCEA2 ENSGALG00000005976 9143 0.929 - - - - 0.929 - - - - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
92. PWP1 ENSGALG00000012631 10536 0.929 - - - - 0.929 - - - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
93. GTF2B ENSGALG00000006205 6950 0.929 - - - - 0.929 - - - - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
94. SLC9A3R2 ENSGALG00000005608 4220 0.928 - - - - 0.928 - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
95. POLR1B ENSGALG00000032273 3845 0.928 - - - - 0.928 - - - - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
96. ZZZ3 ENSGALG00000008988 3132 0.927 - - - - 0.927 - - - - - zinc finger ZZ-type containing 3, transcript variant X5
97. WWP2 ENSGALG00000000699 5040 0.927 - - - - 0.927 - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
98. GALNTL4 GALNTL4 3548 0.927 - - - - 0.927 - - - - -
99. HMGN1 ENSGALG00000016067 17375 0.925 - - - - 0.925 - - - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
100. H2AFY_1 ENSGALG00000040141 4895 0.925 - - - - 0.925 - - - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]

There are 324 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA