Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SFSWAP

Gene Name Gene ID Reads Annotation
SFSWAP ENSGALG00000002487 9977 splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]











Genes with expression patterns similar to SFSWAP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SFSWAP ENSGALG00000002487 9977 9 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
2. SH2D3C ENSGALG00000005036 5101 1.83 - - - - 0.950 - 0.880 - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
3. STK3 ENSGALG00000032850 6339 1.83 - - - - 0.966 - 0.864 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
4. METTL23 ENSGALG00000001790 7906 1.809 - - - - 0.926 - - 0.883 - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
5. GFPT1 ENSGALG00000036391 14025 1.8 - - - - 0.938 - 0.862 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
6. FAAH ENSGALG00000010433 3309 1.749 - - - - - - 0.882 0.867 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
7. NAA25 ENSGALG00000041821 12729 1.729 - - - - 0.936 - - 0.793 - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
8. BTG1 ENSGALG00000011276 17496 1.669 - - - - 0.799 - 0.870 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
9. ACTG1 ENSGALG00000001381 63905 1.638 - - - - 0.854 - 0.784 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
10. NDUFS4 ENSGALG00000028026 25876 0.985 - - - - - - 0.985 - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
11. PUM1 ENSGALG00000042598 9392 0.976 - - - - 0.976 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
12. COMMD8 ENSGALG00000026279 13509 0.974 - - - - 0.974 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
13. PSPC1 ENSGALG00000017142 13036 0.972 - - - - 0.972 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
14. TLK2 ENSGALG00000000410 4690 0.971 - - - - 0.971 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
15. ENSGALG00000014852 ENSGALG00000014852 15288 0.971 - - - - 0.971 - - - - -
16. ZBTB10 ENSGALG00000034376 3271 0.971 - - - - 0.971 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
17. TMEM165 ENSGALG00000027886 5468 0.97 - - - - 0.970 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
18. TRAPPC12 ENSGALG00000016387 2593 0.97 - - - - 0.970 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
19. DNAJC12 ENSGALG00000002769 1418 0.97 - - - - 0.970 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
20. ELL2 ENSGALG00000014678 1111 0.97 - - - - 0.970 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
21. ENSGALG00000011687 ENSGALG00000011687 4553 0.97 - - - - 0.970 - - - - -
22. IGBP1 ENSGALG00000044628 9200 0.97 - - - - 0.970 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
23. SSPN ENSGALG00000014042 638 0.969 - - - - 0.969 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
24. IGF1R ENSGALG00000040651 772 0.969 - - - - 0.969 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
25. NAP1L1 ENSGALG00000010238 14506 0.969 - - - - 0.969 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
26. CDC42SE2 ENSGALG00000027258 4725 0.969 - - - - 0.969 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
27. KNOP1 ENSGALG00000002042 6251 0.969 - - - - 0.969 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
28. TCP11L1 ENSGALG00000011688 2427 0.968 - - - - 0.968 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
29. EAPP ENSGALG00000010007 5080 0.968 - - - - 0.968 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
30. WDR82 ENSGALG00000025904 4783 0.968 - - - - 0.968 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
31. REST 2394 0.968 - - - - 0.968 - - - - - RE1 silencing transcription factor
32. COIL ENSGALG00000003158 7806 0.968 - - - - 0.968 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
33. XPO7 ENSGALG00000001838 1875 0.968 - - - - 0.968 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
34. CTSZ ENSGALG00000007462 630 0.968 - - - - 0.968 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
35. LATS2 4776 0.967 - - - - 0.967 - - - - - large tumor suppressor kinase 2
36. REEP5 ENSGALG00000023157 6282 0.967 - - - - 0.967 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
37. SIRT1 ENSGALG00000002761 9028 0.967 - - - - 0.967 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
38. DDX55 ENSGALG00000003298 2315 0.967 - - - - 0.967 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
39. PCBP4 ENSGALG00000027695 7937 0.965 - - - - 0.965 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
40. TLCD1 ENSGALG00000003973 17569 0.965 - - - - 0.965 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
41. FERMT2 ENSGALG00000012425 5480 0.965 - - - - 0.965 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
42. CBWD1 ENSGALG00000010147 2765 0.965 - - - - 0.965 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
43. MRPS27 ENSGALG00000015002 6541 0.965 - - - - 0.965 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
44. MKI67 ENSGALG00000025996 28136 0.964 - - - - 0.964 - - - - - marker of proliferation Ki-67, transcript variant X3
45. CSNK1G1 ENSGALG00000030812 31618 0.964 - - - - 0.964 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
46. NFASC ENSGALG00000031776 4264 0.964 - - - - 0.964 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
47. RABEP1 ENSGALG00000001737 2650 0.964 - - - - 0.964 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
48. ATG5 ENSGALG00000015387 7752 0.964 - - - - 0.964 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
49. EXO1 ENSGALG00000010748 7572 0.963 - - - - 0.963 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
50. CZH9ORF41 CZH9ORF41 3492 0.963 - - - - 0.963 - - - - -
51. MRPL23 ENSGALG00000006561 13737 0.963 - - - - 0.963 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
52. SSR2 ENSGALG00000000764 32190 0.962 - - - - 0.962 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
53. SAR1B ENSGALG00000038753 6493 0.962 - - - - 0.962 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
54. FH ENSGALG00000013165 13669 0.961 - - - - 0.961 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
55. YY1 ENSGALG00000017388 1933 0.961 - - - - 0.961 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
56. BAG4 ENSGALG00000003254 5751 0.961 - - - - 0.961 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
57. NOP58 ENSGALG00000008454 34630 0.961 - - - - 0.961 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
58. SHROOM2 ENSGALG00000030802 4517 0.96 - - - - 0.960 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
59. MRPS25 ENSGALG00000008506 12131 0.96 - - - - 0.960 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
60. POLR3F ENSGALG00000008749 5645 0.96 - - - - 0.960 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
61. FBXO9 ENSGALG00000016320 9600 0.959 - - - - 0.959 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
62. POLR2B ENSGALG00000011387 4864 0.959 - - - - 0.959 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
63. STRAP ENSGALG00000013092 13100 0.955 - - - - 0.955 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
64. CUL4B ENSGALG00000008559 16864 0.955 - - - - - - - 0.955 - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
65. KPNA3 ENSGALG00000017009 17330 0.953 - - - - 0.953 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
66. AATF ENSGALG00000005420 6501 0.953 - - - - 0.953 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
67. UBE2V1 ENSGALG00000008015 17947 0.952 - - - - - - - 0.952 - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
68. PLAA ENSGALG00000001782 5459 0.951 - - - - 0.951 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
69. TK2 ENSGALG00000034216 5394 0.95 - - - - 0.950 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
70. NAP1L4 ENSGALG00000006446 10868 0.95 - - - - - - - 0.950 - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
71. TBCA ENSGALG00000004353 18510 0.949 - - - - 0.949 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
72. RCAN3 ENSGALG00000004282 7778 0.948 - - - - 0.948 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
73. RANGAP1 ENSGALG00000011966 20170 0.948 - - - - 0.948 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
74. CCT4 ENSGALG00000008812 78267 0.948 - - - - 0.948 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
75. PCNP ENSGALG00000015330 15750 0.947 - - - - - - - 0.947 - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
76. DNAJC15 ENSGALG00000016965 9163 0.946 - - - - - - - 0.946 - - DnaJ heat shock protein family (Hsp40) member C15 [Source:NCBI gene;Acc:418838]
77. LARP1 ENSGALG00000040109 14808 0.946 - - - - 0.946 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
78. IGDCC4 ENSGALG00000007410 5457 0.946 - - - - 0.946 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
79. PTPN12 9302 0.944 - - - - 0.944 - - - - - protein tyrosine phosphatase, non-receptor type 12
80. RAB12 ENSGALG00000033608 14160 0.944 - - - - 0.944 - - - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
81. PLRG1 ENSGALG00000009257 8613 0.943 - - - - - - - 0.943 - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
82. RNF166 ENSGALG00000007272 7154 0.943 - - - - - - - 0.943 - - ring finger protein 166 [Source:NCBI gene;Acc:425360]
83. NUP153 ENSGALG00000012720 8079 0.943 - - - - - - - 0.943 - - nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
84. RAD50 ENSGALG00000006794 4308 0.942 - - - - - - - 0.942 - - RAD50 double strand break repair protein, transcript variant X4
85. GPN3 ENSGALG00000003807 6320 0.941 - - - - 0.941 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
86. SKP2 ENSGALG00000003547 14637 0.941 - - - - 0.941 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
87. RPL24 ENSGALG00000015339 227460 0.94 - - - - 0.940 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
88. PNRC2 ENSGALG00000004122 19228 0.94 - - - - 0.940 - - - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
89. THAP5 ENSGALG00000009494 6540 0.94 - - - - - - - 0.940 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
90. PTTG1 17936 0.939 - - - - 0.939 - - - - - pituitary tumor-transforming 1, transcript variant X1
91. ADD3 ENSGALG00000008542 13814 0.939 - - - - 0.939 - - - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
92. SCCPDH ENSGALG00000010641 8624 0.938 - - - - - - - 0.938 - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
93. OLA1 ENSGALG00000009325 26414 0.938 - - - - 0.938 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
94. OGT ENSGALG00000005425 31074 0.937 - - - - 0.937 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
95. WDR12 ENSGALG00000008470 7654 0.936 - - - - - - - 0.936 - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
96. MOSPD1 ENSGALG00000006132 8503 0.935 - - - - - - - 0.935 - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
97. TAF7 4725 0.935 - - - - - - - 0.935 - - TATA-box binding protein associated factor 7, transcript variant X1
98. THUMPD3 ENSGALG00000008394 17711 0.934 - - - - - - - 0.934 - - THUMP domain containing 3, transcript variant X2
99. DRAXIN ENSGALG00000004631 3122 0.934 - - - - 0.934 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
100. PSMC2 ENSGALG00000008236 25980 0.933 - - - - 0.933 - - - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]

There are 279 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA