Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SF3B6

Gene Name Gene ID Reads Annotation
SF3B6 ENSGALG00000016501 28236 splicing factor 3b subunit 6 [Source:HGNC Symbol;Acc:HGNC:30096]











Genes with expression patterns similar to SF3B6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SF3B6 ENSGALG00000016501 28236 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor 3b subunit 6 [Source:HGNC Symbol;Acc:HGNC:30096]
2. RBM18 ENSGALG00000028167 10372 0.922 - - - - - - 0.922 - - - RNA binding motif protein 18 [Source:HGNC Symbol;Acc:HGNC:28413]
3. CKAP2 ENSGALG00000017025 25020 0.922 - - - - - - 0.922 - - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
4. DEPDC1B ENSGALG00000014729 5334 0.922 - - - - - - 0.922 - - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
5. SMPD3 ENSGALG00000034950 4335 0.922 - - - - - - 0.922 - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
6. IGDCC3 ENSGALG00000007371 2434 0.922 - - - - - - 0.922 - - - immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
7. RBM45 ENSGALG00000009202 6057 0.922 - - - - - - 0.922 - - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
8. CHKA ENSGALG00000036754 5077 0.922 - - - - - - 0.922 - - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
9. TOPBP1 ENSGALG00000034461 3094 0.922 - - - - - - 0.922 - - - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
10. SLBP ENSGALG00000015712 5586 0.922 - - - - - - 0.922 - - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
11. UGCG ENSGALG00000015682 2735 0.922 - - - - - - 0.922 - - - UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:12524]
12. GALT ENSGALG00000026195 2002 0.922 - - - - - - 0.922 - - - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
13. HSD17B12 ENSGALG00000036787 11748 0.922 - - - - - - 0.922 - - - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
14. GATAD2A ENSGALG00000042900 6337 0.922 - - - - - - 0.922 - - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
15. DDX1 ENSGALG00000016461 15157 0.921 - - - - - - 0.921 - - - DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
16. APP ENSGALG00000015770 9438 0.921 - - - - - - 0.921 - - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
17. RALBP1 ENSGALG00000008405 13780 0.921 - - - - - - 0.921 - - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
18. PLOD2 ENSGALG00000006783 22789 0.921 - - - - - - 0.921 - - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
19. IRF6 ENSGALG00000001405 3144 0.92 - - - - - - 0.920 - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
20. C1D ENSGALG00000008765 14779 0.92 - - - - - - 0.920 - - - C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
21. THOC5 ENSGALG00000029223 16069 0.92 - - - - - - 0.920 - - - THO complex 5 [Source:NCBI gene;Acc:417019]
22. UTP15 ENSGALG00000013510 13122 0.919 - - - - - - 0.919 - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
23. C28H19ORF10 C28H19ORF10 16529 0.918 - - - - - - 0.918 - - -
24. DDOST ENSGALG00000010073 18707 0.918 - - - - - - 0.918 - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
25. YWHAE ENSGALG00000002661 37143 0.916 - - - - - - 0.916 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
26. HECTD3 ENSGALG00000010217 2513 0.914 - - - - - - 0.914 - - - HECT domain E3 ubiquitin protein ligase 3, transcript variant X2
27. LSM7 ENSGALG00000000408 19112 0.91 - - - - - - 0.910 - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
28. BZW2 ENSGALG00000010809 29213 0.907 - - - - - - 0.907 - - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
29. NUDCD2 ENSGALG00000001726 6303 0.898 - - - - - - 0.898 - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
30. NDUFA10 ENSGALG00000004302 41948 0.892 - - - - - - 0.892 - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
31. ASNS ENSGALG00000009748 11822 0.887 - - - - - - 0.887 - - - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
32. RNF7 ENSGALG00000021117 13110 0.871 - - - - - - 0.871 - - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
33. SUGT1 ENSGALG00000016946 22881 0.862 - - - - - - 0.862 - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
34. CDC34 ENSGALG00000024332 4562 0.858 - - - - - - - 0.858 - - cell division cycle 34 [Source:HGNC Symbol;Acc:HGNC:1734]
35. IDH1 ENSGALG00000008818 17613 0.842 - - - - - - 0.842 - - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
36. DYL1 ENSGALG00000007153 94287 0.837 - - - - - - - 0.837 - - dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
37. CDC42 ENSGALG00000004796 59878 0.823 - - - - - - 0.823 - - - cell division cycle 42 [Source:NCBI gene;Acc:395917]
38. CENPP ENSGALG00000004687 6707 0.79 - - - - - - - 0.790 - - centromere protein P [Source:NCBI gene;Acc:415952]
39. SQLE ENSGALG00000036915 4172 0.787 - - - - - - - 0.787 - - squalene epoxidase [Source:NCBI gene;Acc:420335]
40. RPL37A ENSGALG00000011472 153794 0.777 - - - - - - - 0.777 - - ribosomal protein L37a [Source:NCBI gene;Acc:769981]
41. SRSF3 ENSGALG00000000533 51281 0.775 - - - - - - 0.775 - - - serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]
42. EIF4EBP1 ENSGALG00000003205 89048 0.77 - - - - - - 0.770 - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
43. SLC25A13 ENSGALG00000009728 8858 0.756 - - - - - - - 0.756 - - solute carrier family 25 member 13 [Source:NCBI gene;Acc:428427]
44. DNAJC25 ENSGALG00000015684 4554 0.747 - - - - - - 0.747 - - - DnaJ heat shock protein family (Hsp40) member C25
45. NECAP1 ENSGALG00000037656 5181 0.739 - - - - - - - 0.739 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
46. SMC3 ENSGALG00000008585 16618 0.734 - - - - - - - 0.734 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
47. NOC4L ENSGALG00000002272 9644 0.732 - - - - - - - 0.732 - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
48. MADH2 MADH2 13017 0.732 - - - - 0.732 - - - - -
49. CASP3 ENSGALG00000010638 11572 0.732 - - - - - - - 0.732 - - caspase 3 [Source:NCBI gene;Acc:395476]
50. DDX24 ENSGALG00000010884 5485 0.732 - - - - - - - 0.732 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
51. CHMP5 ENSGALG00000013160 13347 0.731 - - - - - - - 0.731 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
52. PGM1 ENSGALG00000011016 3391 0.73 - - - - - - - 0.730 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
53. RBFA ENSGALG00000036067 6542 0.73 - - - - - - - 0.730 - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
54. RRN3 ENSGALG00000041989 3934 0.727 - - - - - - - 0.727 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
55. HBXIP HBXIP 8637 0.727 - - - - - - - 0.727 - -
56. KIAA0895L 1739 0.727 - - - - - - - 0.727 - - KIAA0895 like, transcript variant X4
57. RNF113A ENSGALG00000000538 3985 0.726 - - - - - - - 0.726 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
58. CARKD CARKD 2914 0.726 - - - - - - - 0.726 - -
59. GGA3 ENSGALG00000007992 3566 0.726 - - - - - - - 0.726 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
60. FXN ENSGALG00000015108 1867 0.726 - - - - - - - 0.726 - - frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
61. MADD ENSGALG00000008181 2273 0.726 - - - - - - - 0.726 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
62. SCLT1 2397 0.726 - - - - - - - 0.726 - - sodium channel and clathrin linker 1, transcript variant X6
63. ENSGALG00000010034 ENSGALG00000010034 3293 0.726 - - - - - - - 0.726 - -
64. YTHDC2 2266 0.725 - - - - - - - 0.725 - - YTH domain containing 2, transcript variant X3
65. JKAMP ENSGALG00000012009 5781 0.725 - - - - - - - 0.725 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
66. PDCD2L 4843 0.725 - - - - - - - 0.725 - - programmed cell death 2-like
67. UBALD1 ENSGALG00000007619 8536 0.724 - - - - - - - 0.724 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
68. FAM125B FAM125B 2953 0.724 - - - - - - - 0.724 - -
69. ATL1 ENSGALG00000012339 3789 0.724 - - - - - - - 0.724 - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
70. TMTC2 ENSGALG00000010975 7040 0.724 - - - - - - - 0.724 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
71. NPFF1 NPFF1 3177 0.724 - - - - - - - 0.724 - -
72. EIF3D ENSGALG00000012529 40887 0.722 - - - - - - - 0.722 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
73. MMADHC ENSGALG00000012473 9026 0.721 - - - - - - - 0.721 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
74. CCT8 ENSGALG00000015821 12161 0.72 - - - - 0.720 - - - - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
75. GPI ENSGALG00000004956 40030 0.719 - - - - - - 0.719 - - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
76. RIC8A ENSGALG00000004191 6094 0.719 - - - - - - - 0.719 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
77. GCLM ENSGALG00000005782 15789 0.718 - - - - - - - 0.718 - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
78. CHTOP ENSGALG00000042129 24112 0.712 - - - - - - - 0.712 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
79. ARHGAP11A ENSGALG00000009731 6817 0.707 - - - - - - - 0.707 - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
80. NDUFA2 ENSGALG00000040626 27899 0.707 - - - - - - - 0.707 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
81. RABGGTB ENSGALG00000011388 11654 0.704 - - 0.704 - - - - - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
82. RPL13 ENSGALG00000006179 345032 0.703 - - - - - - - 0.703 - - ribosomal protein L13 [Source:NCBI gene;Acc:395849]
83. HMGN2 HMGN2 158543 0.702 - - - - - - - 0.702 - -
84. SLC16A1 ENSGALG00000001717 18566 0.701 - - - - - - 0.701 - - - solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA