Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SF3B3

Gene Name Gene ID Reads Annotation
SF3B3 ENSGALG00000002531 19397 splicing factor 3b subunit 3, transcript variant X2











Genes with expression patterns similar to SF3B3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SF3B3 ENSGALG00000002531 19397 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor 3b subunit 3, transcript variant X2
2. ATR ENSGALG00000002663 4626 2.283 - - - 0.735 - - 0.792 0.756 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
3. PFKL ENSGALG00000006543 4361 2.235 - - - 0.710 - - 0.702 0.823 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
4. TM4SF18 4553 1.665 - - - - - - 0.827 0.838 - - transmembrane 4 L six family member 18, transcript variant X2
5. RAB18 ENSGALG00000007435 3589 1.639 - - - - - - 0.809 0.830 - - RAB18, member RAS oncogene family [Source:NCBI gene;Acc:420483]
6. C11H16ORF80 C11H16ORF80 18673 1.63 - - - - - - 0.795 0.835 - -
7. FAM177A1 ENSGALG00000010046 4318 1.604 - - - - - - 0.808 0.796 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
8. ZMPSTE24 ENSGALG00000000855 5144 1.579 - - - - - - 0.804 0.775 - - zinc metallopeptidase STE24 [Source:HGNC Symbol;Acc:HGNC:12877]
9. NDUFA12 ENSGALG00000011325 19807 1.576 - - - - - - 0.795 0.781 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
10. ENSGALG00000020510 ENSGALG00000020510 4037 1.571 - - - - - - 0.784 0.787 - -
11. NUBPL ENSGALG00000009983 3328 1.566 - - - - - - 0.760 0.806 - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
12. ADI1 ENSGALG00000025796 8636 1.566 - - - - - - 0.751 0.815 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
13. DDX10 ENSGALG00000017156 5657 1.565 - - - - - - 0.762 0.803 - - DEAD-box helicase 10 [Source:NCBI gene;Acc:418965]
14. BLMH ENSGALG00000004259 36907 1.558 - - - - - - 0.707 0.851 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
15. RRP7A ENSGALG00000011866 7718 1.557 - - - - - - 0.730 0.827 - - ribosomal RNA processing 7 homolog A [Source:NCBI gene;Acc:417975]
16. FAM18B1 ENSGALG00000001335 5177 1.552 - - - - - - 0.753 0.799 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
17. BPNT1 ENSGALG00000009576 7445 1.548 - - - - - - 0.737 0.811 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
18. DNAJA4 ENSGALG00000036850 6847 1.546 - - - - - - 0.740 0.806 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
19. GNAI2 ENSGALG00000035645 9535 1.545 - - - - - - 0.828 0.717 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
20. CHRAC1 ENSGALG00000040823 5695 1.54 - - - - - - 0.770 0.770 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
21. COBRA1 COBRA1 4600 1.54 - - - - - - 0.739 0.801 - -
22. TIMM8A ENSGALG00000004963 14263 1.54 - - - - - - 0.771 0.769 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
23. ACTR8 ENSGALG00000005385 3647 1.534 - - - - - - 0.759 0.775 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
24. CDK2AP1 ENSGALG00000034919 5469 1.534 - - - - - - 0.726 0.808 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
25. BPGM ENSGALG00000013069 4520 1.52 - - - - - - 0.703 0.817 - - bisphosphoglycerate mutase [Source:NCBI gene;Acc:418172]
26. DHX30 ENSGALG00000039830 5187 1.519 - - - - - - 0.794 0.725 - - DExH-box helicase 30 [Source:NCBI gene;Acc:420376]
27. RRP36 ENSGALG00000028056 7560 1.519 - - - - - - 0.720 0.799 - - ribosomal RNA processing 36
28. R3HDM1 ENSGALG00000012246 6580 1.519 - - - - - - 0.740 0.779 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
29. INCENP ENSGALG00000007537 16617 1.517 - - - - - - 0.789 0.728 - - inner centromere protein [Source:NCBI gene;Acc:396270]
30. QTRTD1 QTRTD1 10765 1.516 - - - - - - 0.729 0.787 - -
31. SPCS1 ENSGALG00000001655 7718 1.516 - - - - - - 0.757 0.759 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
32. TSTD1 TSTD1 3613 1.516 - - - - - - 0.764 0.752 - -
33. IREB2 ENSGALG00000035462 10659 1.515 - - - - - - 0.782 0.733 - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
34. FAM98B ENSGALG00000009744 3435 1.514 - - - - - - 0.770 0.744 - - family with sequence similarity 98 member B [Source:HGNC Symbol;Acc:HGNC:26773]
35. CCNH ENSGALG00000015641 8051 1.513 - - - - - - 0.707 0.806 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
36. MRPL2 ENSGALG00000008597 16500 1.512 - - - - - - 0.775 0.737 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
37. FANCG ENSGALG00000002009, ENSGALG00000034209 2528 1.512 - - - - - - 0.805 0.707 - - Fanconi anemia complementation group G, transcript variant X1
38. PCTP ENSGALG00000003099 5851 1.51 - - - - - - 0.765 0.745 - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
39. GXYLT1 ENSGALG00000009532 5682 1.507 - - - - - - 0.749 0.758 - - glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
40. SNX7 ENSGALG00000005478 4736 1.506 - - - - - - 0.705 0.801 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
41. UBFD1 ENSGALG00000006117 5242 1.506 - - - - - - 0.721 0.785 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
42. MRPS30 ENSGALG00000014874 3416 1.505 - - - 0.705 - - 0.800 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
43. PAPSS1 ENSGALG00000010542 5631 1.505 - - - - - - 0.722 0.783 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
44. CCNDBP1 ENSGALG00000004837 11520 1.501 - - - - - - 0.729 0.772 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
45. ATP6AP1 ENSGALG00000008836 4343 1.495 - - - - - - 0.732 0.763 - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
46. CLK1 ENSGALG00000028438 3550 1.494 - - - - - - 0.791 0.703 - - CDC like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2068]
47. WIPI2 ENSGALG00000004557 4961 1.49 - - - 0.719 - - - 0.771 - - WD repeat domain, phosphoinositide interacting 2 [Source:NCBI gene;Acc:416481]
48. LLPH ENSGALG00000019358 20976 1.489 - - - - - - 0.784 0.705 - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
49. CNOT11 ENSGALG00000039563 11251 1.488 - - - - - - 0.762 0.726 - - CCR4-NOT transcription complex subunit 11
50. TMCC2 ENSGALG00000034281 3458 1.479 - - - - - - 0.704 0.775 - - transmembrane and coiled-coil domain family 2 [Source:HGNC Symbol;Acc:HGNC:24239]
51. UNC119B ENSGALG00000026722 8622 1.479 - - - - - - 0.746 0.733 - - unc-119 lipid binding chaperone B [Source:HGNC Symbol;Acc:HGNC:16488]
52. DCTN4 ENSGALG00000004534 8442 1.478 - - - - - - 0.719 0.759 - - dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15518]
53. CDK8 ENSGALG00000017104 5956 1.477 - - - 0.723 - - 0.754 - - - cyclin dependent kinase 8, transcript variant X4
54. EVL ENSGALG00000011209 5440 1.475 - - - - - - 0.757 0.718 - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
55. MRPL46 ENSGALG00000006782 5033 1.474 - - - - - - 0.710 0.764 - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
56. CNI CNI 18453 1.473 - - - - - - 0.723 0.750 - -
57. RFC1 ENSGALG00000014298 6516 1.472 - - - - - - 0.706 0.766 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
58. PTGR1 ENSGALG00000015702 3667 1.469 - - - - - - 0.748 0.721 - - prostaglandin reductase 1 [Source:NCBI gene;Acc:427337]
59. SUCLA2 ENSGALG00000016993 4735 1.467 - - - - - - 0.728 0.739 - - succinate-CoA ligase ADP-forming beta subunit [Source:NCBI gene;Acc:418857]
60. TTYH2 ENSGALG00000026940 15628 1.466 - - - - - - 0.760 - 0.706 - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
61. ASH2L ENSGALG00000003233 4814 1.463 - - - - - - 0.730 0.733 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
62. IMPA2 ENSGALG00000013814 4202 1.461 - - - - - - 0.747 0.714 - - inositol monophosphatase 2 [Source:HGNC Symbol;Acc:HGNC:6051]
63. PTPMT1 ENSGALG00000008091 6160 1.46 - - - - - - 0.709 0.751 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
64. TRUB2 ENSGALG00000004920 5425 1.454 - - - - - - 0.730 0.724 - - TruB pseudouridine synthase family member 2 [Source:HGNC Symbol;Acc:HGNC:17170]
65. C4orf27 C4orf27 16724 1.454 - - - - - - 0.738 0.716 - -
66. NOC2L ENSGALG00000002222 6569 1.454 - - - - - - 0.745 0.709 - - NOC2 like nucleolar associated transcriptional repressor [Source:NCBI gene;Acc:419433]
67. F F 3639 1.453 - - - - - - 0.725 0.728 - -
68. PCM1 ENSGALG00000013602 6347 1.452 - - - - - - 0.744 0.708 - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
69. IFRD1 ENSGALG00000009448 8865 1.448 - - - - - - 0.714 0.734 - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
70. HSD17B11 ENSGALG00000010979 3104 1.447 - - - - - - 0.739 0.708 - - hydroxysteroid 17-beta dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:22960]
71. EXOSC10 ENSGALG00000003086 3223 1.446 - - - - - - 0.734 0.712 - - exosome component 10 [Source:NCBI gene;Acc:419454]
72. ASPG ENSGALG00000011572 4984 1.445 - - - - - - 0.707 0.738 - - asparaginase [Source:HGNC Symbol;Acc:HGNC:20123]
73. GLI2 ENSGALG00000011630 3347 1.445 - - - - - - 0.718 0.727 - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
74. GNS ENSGALG00000009856 3045 1.438 - - - - - - 0.704 0.734 - - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
75. CD276 ENSGALG00000001729 11630 1.436 - - - - - - 0.719 0.717 - - CD276 molecule [Source:NCBI gene;Acc:415315]
76. MRPL47 ENSGALG00000013759 9044 1.436 - - - - - - 0.706 0.730 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
77. BRD9 4377 1.435 - - - - - - 0.716 0.719 - - bromodomain containing 9, transcript variant X3
78. MYC ENSGALG00000033631 16949 1.424 - - - - - - 0.711 0.713 - - MYC proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:420332]
79. PAXIP1 ENSGALG00000036064 3120 1.422 - - - 0.701 - - 0.721 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
80. DERA ENSGALG00000013095 4135 1.409 - - - - - - 0.709 0.700 - - deoxyribose-phosphate aldolase [Source:NCBI gene;Acc:418176]
81. PSMC3 ENSGALG00000008108 22922 0.898 - - - - - - 0.898 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
82. HINT3 ENSGALG00000044342 5674 0.878 - - - - - - - 0.878 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
83. NUP85 ENSGALG00000007974 21249 0.878 - - - - - - - 0.878 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
84. RFC5 ENSGALG00000026517 26113 0.868 - - - - - - 0.868 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
85. COMMD4 ENSGALG00000001572 31664 0.863 - - - - - - 0.863 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
86. RUVBL1 ENSGALG00000005931 9379 0.862 - - - - - - 0.862 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
87. LSM5 ENSGALG00000041625 22307 0.86 - - - - - - 0.860 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
88. VBP1 VBP1 14482 0.859 - - - - - - 0.859 - - -
89. VTA1 ENSGALG00000013810 4998 0.859 - - - - - - - 0.859 - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
90. ILF2 ENSGALG00000011570 23050 0.858 - - - - - - 0.858 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
91. HERC2 ENSGALG00000016739 9900 0.858 - - - - - - 0.858 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
92. SLMO2 SLMO2 9207 0.857 - - - - - - - 0.857 - -
93. TAF13 ENSGALG00000015185 11410 0.855 - - - - - - - 0.855 - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
94. ENSGALG00000005727 ENSGALG00000005727 4334 0.851 - - - - - - 0.851 - - -
95. TPRKB ENSGALG00000013018 8687 0.85 - - - - - - 0.850 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
96. TMEM14A ENSGALG00000019894 5279 0.848 - - - - - - - 0.848 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
97. SIVA1 ENSGALG00000011619 15130 0.847 - - - - - - 0.847 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
98. PSMD13 ENSGALG00000043684 14720 0.847 - - - - - - - 0.847 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
99. DAD1 ENSGALG00000035626 32604 0.847 - - - - - - - 0.847 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
100. IARS ENSGALG00000004813 12936 0.846 - - - - - - - 0.846 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]

There are 859 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA