Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SF3B3

Gene Name Gene ID Reads Annotation
SF3B3 ENSG00000189091 8156 splicing factor 3b subunit 3 [Source:HGNC Symbol;Acc:HGNC:10770]



Genes with expression patterns similar to SF3B3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SF3B3 ENSG00000189091 8156 2 1.000 1.000 splicing factor 3b subunit 3 [Source:HGNC Symbol;Acc:HGNC:10770]
2. TRIM28 ENSG00000130726 33518 0.847 - 0.847 tripartite motif containing 28 [Source:HGNC Symbol;Acc:HGNC:16384]
3. MED24 ENSG00000008838 7251 0.825 - 0.825 mediator complex subunit 24 [Source:HGNC Symbol;Acc:HGNC:22963]
4. SNRPA ENSG00000077312 4577 0.824 - 0.824 small nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:HGNC:11151]
5. UBA1 ENSG00000130985 20298 0.819 - 0.819 ubiquitin like modifier activating enzyme 1 [Source:HGNC Symbol;Acc:HGNC:12469]
6. FUS ENSG00000089280 23952 0.81 - 0.810 FUS RNA binding protein [Source:HGNC Symbol;Acc:HGNC:4010]
7. PELP1 ENSG00000141456 2409 0.805 - 0.805 proline, glutamate and leucine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:30134]
8. U2AF2 ENSG00000063244 19476 0.804 - 0.804 U2 small nuclear RNA auxiliary factor 2 [Source:HGNC Symbol;Acc:HGNC:23156]
9. TAF15 ENSG00000270647, ENSG00000276833 10005 0.802 - 0.802 TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
10. HDGF ENSG00000143321 18626 0.802 - 0.802 heparin binding growth factor [Source:HGNC Symbol;Acc:HGNC:4856]
11. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 314035 0.802 - 0.802 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
12. PSME3 ENSG00000131467 10433 0.797 - 0.797 proteasome activator subunit 3 [Source:HGNC Symbol;Acc:HGNC:9570]
13. USP11 ENSG00000102226 8177 0.795 - 0.795 ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]
14. DNMT1 ENSG00000130816 23001 0.792 - 0.792 DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]
15. DCTN1 ENSG00000204843 19815 0.791 - 0.791 dynactin subunit 1 [Source:HGNC Symbol;Acc:HGNC:2711]
16. USP22 ENSG00000124422 49599 0.79 - 0.790 ubiquitin specific peptidase 22 [Source:HGNC Symbol;Acc:HGNC:12621]
17. STRN4 ENSG00000090372 7212 0.788 - 0.788 striatin 4 [Source:HGNC Symbol;Acc:HGNC:15721]
18. MLF2 ENSG00000089693 18042 0.788 - 0.788 myeloid leukemia factor 2 [Source:HGNC Symbol;Acc:HGNC:7126]
19. SRRT ENSG00000087087 9730 0.786 - 0.786 serrate, RNA effector molecule [Source:HGNC Symbol;Acc:HGNC:24101]
20. HSP90AB1 ENSG00000096384 183977 0.785 - 0.785 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
21. BAG6 ENSG00000096155, ENSG00000204463, ENSG00000227761, ENSG00000228760, ENSG00000229524, ENSG00000233348, ENSG00000234651 5198 0.785 - 0.785 BCL2 associated athanogene 6 [Source:HGNC Symbol;Acc:HGNC:13919]
22. EPN1 ENSG00000063245 5192 0.781 - 0.781 epsin 1 [Source:HGNC Symbol;Acc:HGNC:21604]
23. HCFC1 ENSG00000172534 21012 0.78 - 0.780 host cell factor C1 [Source:HGNC Symbol;Acc:HGNC:4839]
24. FIBP ENSG00000172500 3001 0.78 - 0.780 FGF1 intracellular binding protein [Source:HGNC Symbol;Acc:HGNC:3705]
25. SAFB ENSG00000160633 7035 0.779 - 0.779 scaffold attachment factor B [Source:HGNC Symbol;Acc:HGNC:10520]
26. CAPNS1 ENSG00000126247 60832 0.778 - 0.778 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
27. CSNK2B ENSG00000204435, ENSG00000206406, ENSG00000224398, ENSG00000224774, ENSG00000228875, ENSG00000230700, ENSG00000232960 15233 0.778 - 0.778 casein kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:2460]
28. EHMT2 ENSG00000204371, ENSG00000206376, ENSG00000224143, ENSG00000227333, ENSG00000232045, ENSG00000236759, ENSG00000238134 6990 0.777 - 0.777 euchromatic histone lysine methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:14129]
29. POLR2E ENSG00000099817 7529 0.776 - 0.776 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
30. MARCKSL1 ENSG00000175130 73054 0.77 - 0.770 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
31. PRDX2 ENSG00000167815 5248 0.767 - 0.767 peroxiredoxin 2 [Source:HGNC Symbol;Acc:HGNC:9353]
32. EEF2 ENSG00000167658 47680 0.766 - 0.766 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:3214]
33. PDAP1 ENSG00000106244 8971 0.764 - 0.764 PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
34. PMF1 ENSG00000160783 12298 0.76 - 0.760 polyamine modulated factor 1 [Source:HGNC Symbol;Acc:HGNC:9112]
35. RNPS1 ENSG00000205937 13270 0.756 - 0.756 RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
36. GPS2 ENSG00000132522 22685 0.754 - 0.754 G protein pathway suppressor 2 [Source:HGNC Symbol;Acc:HGNC:4550]
37. CSK ENSG00000103653 5441 0.753 - 0.753 C-terminal Src kinase [Source:HGNC Symbol;Acc:HGNC:2444]
38. EIF5A ENSG00000132507 27570 0.751 - 0.751 eukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:HGNC:3300]
39. SLC25A39 ENSG00000013306 12058 0.751 - 0.751 solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
40. CDK16 ENSG00000102225 4372 0.75 - 0.750 cyclin dependent kinase 16 [Source:HGNC Symbol;Acc:HGNC:8749]
41. KRTCAP2 ENSG00000163463 28431 0.75 - 0.750 keratinocyte associated protein 2 [Source:HGNC Symbol;Acc:HGNC:28942]
42. PKM ENSG00000067225 58854 0.75 - 0.750 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
43. RNF216P1 ENSG00000196204 9157 0.75 - 0.750 ring finger protein 216 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:33610]
44. FKBP4 ENSG00000004478 8049 0.75 - 0.750 FK506 binding protein 4 [Source:HGNC Symbol;Acc:HGNC:3720]
45. TBC1D10B ENSG00000169221 2803 0.748 - 0.748 TBC1 domain family member 10B [Source:HGNC Symbol;Acc:HGNC:24510]
46. FOXRED2 ENSG00000100350 5176 0.748 - 0.748 FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
47. XPO6 ENSG00000169180 5152 0.748 - 0.748 exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
48. TNPO2 ENSG00000105576 7612 0.747 - 0.747 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
49. ATP5SL 25967 0.746 - 0.746 ATP5S like, transcript variant X1
50. CIZ1 ENSG00000148337 3149 0.746 - 0.746 CDKN1A interacting zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:16744]
51. CTDNEP1 ENSG00000175826 15483 0.745 - 0.745 CTD nuclear envelope phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:19085]
52. TAF6 ENSG00000106290 8475 0.744 - 0.744 TATA-box binding protein associated factor 6 [Source:HGNC Symbol;Acc:HGNC:11540]
53. CS ENSG00000062485 8243 0.742 - 0.742 citrate synthase [Source:HGNC Symbol;Acc:HGNC:2422]
54. ATP6V0C ENSG00000185883 26903 0.742 - 0.742 ATPase H+ transporting V0 subunit c [Source:HGNC Symbol;Acc:HGNC:855]
55. BAHCC1 ENSG00000266074 3120 0.742 - 0.742 BAH domain and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29279]
56. PATL1 ENSG00000166889 11962 0.74 - 0.740 PAT1 homolog 1, processing body mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:26721]
57. AURKB ENSG00000178999 25157 0.74 - 0.740 aurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]
58. DAZAP1 ENSG00000071626 4496 0.739 - 0.739 DAZ associated protein 1 [Source:HGNC Symbol;Acc:HGNC:2683]
59. DGUOK ENSG00000114956 7698 0.738 - 0.738 deoxyguanosine kinase [Source:HGNC Symbol;Acc:HGNC:2858]
60. PGD ENSG00000142657 19400 0.737 - 0.737 phosphogluconate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8891]
61. EIF2AK1 ENSG00000086232 14202 0.736 - 0.736 eukaryotic translation initiation factor 2 alpha kinase 1 [Source:HGNC Symbol;Acc:HGNC:24921]
62. OTUB1 ENSG00000167770 22747 0.735 - 0.735 OTU deubiquitinase, ubiquitin aldehyde binding 1 [Source:HGNC Symbol;Acc:HGNC:23077]
63. FAM127B 11371 0.735 - 0.735 family with sequence similarity 127 member B, transcript variant 2
64. KHSRP ENSG00000088247 13538 0.735 - 0.735 KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:HGNC:6316]
65. C19orf54 ENSG00000188493 1498 0.734 - 0.734 chromosome 19 open reading frame 54 [Source:HGNC Symbol;Acc:HGNC:24758]
66. USP5 ENSG00000111667 2579 0.734 - 0.734 ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
67. FSCN1 ENSG00000075618 34169 0.734 - 0.734 fascin actin-bundling protein 1 [Source:HGNC Symbol;Acc:HGNC:11148]
68. FKBP1A ENSG00000088832 16905 0.732 - 0.732 FK506 binding protein 1A [Source:HGNC Symbol;Acc:HGNC:3711]
69. G6PD ENSG00000160211 5383 0.731 - 0.731 glucose-6-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4057]
70. MCM5 ENSG00000100297 8452 0.73 - 0.730 minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]
71. SKI ENSG00000157933 7837 0.73 - 0.730 SKI proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10896]
72. TRAP1 ENSG00000126602 7214 0.73 - 0.730 TNF receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16264]
73. NT5DC2 ENSG00000168268 9618 0.73 - 0.730 5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]
74. PPME1 ENSG00000214517 4946 0.729 - 0.729 protein phosphatase methylesterase 1 [Source:HGNC Symbol;Acc:HGNC:30178]
75. RHBDD2 ENSG00000005486 6577 0.728 - 0.728 rhomboid domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23082]
76. ASF1B ENSG00000105011 6283 0.728 - 0.728 anti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]
77. TBCB ENSG00000105254 27421 0.727 - 0.727 tubulin folding cofactor B [Source:HGNC Symbol;Acc:HGNC:1989]
78. NDUFS2 ENSG00000158864 10441 0.727 - 0.727 NADH:ubiquinone oxidoreductase core subunit S2 [Source:HGNC Symbol;Acc:HGNC:7708]
79. CSNK2A1 ENSG00000101266 6485 0.726 - 0.726 casein kinase 2 alpha 1 [Source:HGNC Symbol;Acc:HGNC:2457]
80. SF3B2 ENSG00000087365 6044 0.724 - 0.724 splicing factor 3b subunit 2 [Source:HGNC Symbol;Acc:HGNC:10769]
81. CDK2AP2 ENSG00000167797 5955 0.724 - 0.724 cyclin dependent kinase 2 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:30833]
82. EIF5AL1 ENSG00000253626 6628 0.724 - 0.724 eukaryotic translation initiation factor 5A-like 1 [Source:HGNC Symbol;Acc:HGNC:17419]
83. SMARCA4 ENSG00000127616 21398 0.722 - 0.722 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
84. SRM ENSG00000116649 8533 0.722 - 0.722 spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
85. FASN ENSG00000169710 19582 0.722 - 0.722 fatty acid synthase [Source:HGNC Symbol;Acc:HGNC:3594]
86. TSC2 ENSG00000103197 7240 0.722 - 0.722 TSC complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:12363]
87. CDIP1 ENSG00000089486, ENSG00000274336 2346 0.721 - 0.721 cell death inducing p53 target 1 [Source:HGNC Symbol;Acc:HGNC:13234]
88. REPIN1 ENSG00000214022 4516 0.721 - 0.721 replication initiator 1 [Source:HGNC Symbol;Acc:HGNC:17922]
89. SRSF2 ENSG00000161547 77112 0.72 - 0.720 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
90. CDK5RAP3 ENSG00000108465 6420 0.717 - 0.717 CDK5 regulatory subunit associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18673]
91. SNRNP70 ENSG00000104852 14118 0.717 - 0.717 small nuclear ribonucleoprotein U1 subunit 70 [Source:HGNC Symbol;Acc:HGNC:11150]
92. ARF3 ENSG00000134287 6922 0.716 - 0.716 ADP ribosylation factor 3 [Source:HGNC Symbol;Acc:HGNC:654]
93. ULK1 ENSG00000177169 6408 0.716 - 0.716 unc-51 like autophagy activating kinase 1 [Source:HGNC Symbol;Acc:HGNC:12558]
94. CAPN15 ENSG00000103326, ENSG00000282214 3844 0.716 - 0.716 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
95. PPM1G ENSG00000115241 6639 0.716 - 0.716 protein phosphatase, Mg2+/Mn2+ dependent 1G [Source:HGNC Symbol;Acc:HGNC:9278]
96. CIAPIN1 ENSG00000005194 5863 0.716 - 0.716 cytokine induced apoptosis inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:28050]
97. PRPF8 ENSG00000174231, ENSG00000274442 8190 0.715 - 0.715 pre-mRNA processing factor 8 [Source:HGNC Symbol;Acc:HGNC:17340]
98. TERF2 ENSG00000132604 14503 0.714 - 0.714 telomeric repeat binding factor 2 [Source:HGNC Symbol;Acc:HGNC:11729]
99. AP2M1 ENSG00000161203 7936 0.713 - 0.713 adaptor related protein complex 2 subunit mu 1 [Source:HGNC Symbol;Acc:HGNC:564]
100. CUTA ENSG00000112514, ENSG00000226492 17547 0.712 - 0.712 cutA divalent cation tolerance homolog [Source:HGNC Symbol;Acc:HGNC:21101]

There are 28 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA