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Results for SF3A3

Gene Name Gene ID Reads Annotation
SF3A3 ENSGALG00000001540 9664 splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]











Genes with expression patterns similar to SF3A3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SF3A3 ENSGALG00000001540 9664 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
2. AP3S1 ENSGALG00000002341 12388 2.471 - - - - - - 0.854 0.788 - 0.829 adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
3. INTS10 ENSGALG00000010130 6320 1.799 - - - - - - 0.903 - - 0.896 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
4. NARS ENSGALG00000040506 9506 1.791 - - - - - - 0.889 - - 0.902 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
5. DNA2 ENSGALG00000004037 5426 1.79 - - - - - - 0.937 - - 0.853 DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
6. CCND1 ENSGALG00000007555 6715 1.751 - - - - - - 0.918 - - 0.833 cyclin D1 [Source:NCBI gene;Acc:396341]
7. BPTF ENSGALG00000038222 7521 1.72 - - - - - - 0.928 0.792 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
8. LACTB2 ENSGALG00000038745 3460 1.712 - - - - - - 0.900 - - 0.812 lactamase beta 2 [Source:NCBI gene;Acc:420178]
9. BFAR ENSGALG00000003111 1778 1.696 - - - - - - 0.913 0.783 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
10. RPA1 ENSGALG00000003072 8023 1.684 - - - - - - 0.937 0.747 - - replication protein A1 [Source:NCBI gene;Acc:417563]
11. PSMC2 ENSGALG00000008236 25980 1.671 - - - - - - 0.835 - - 0.836 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
12. STX2 ENSGALG00000002536 10438 1.656 - - - - - - 0.771 - - 0.885 syntaxin 2 [Source:NCBI gene;Acc:378895]
13. NPHP3 ENSGALG00000034586 1465 1.653 - - - - - - 0.892 0.761 - - nephrocystin 3, transcript variant X1
14. RGCC ENSGALG00000016954 1282 1.613 - - - - - - 0.850 0.763 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
15. RAB20 ENSGALG00000016844 3250 1.612 - - - - - - 0.843 - - 0.769 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
16. GTF2E1 ENSGALG00000042320 7712 1.604 - - - - - - 0.840 - - 0.764 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
17. BET1 ENSGALG00000024485 2451 1.595 - - - - - - - 0.776 - 0.819 Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
18. ATP5C1 53961 1.519 - - - - - - 0.733 - - 0.786 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
19. ENSGALG00000003515 ENSGALG00000003515 1003 1.518 - - - - - - - - 0.706 0.812
20. PRPS1 ENSGALG00000004908 27994 1.511 - - - - - - 0.705 - - 0.806 phosphoribosyl pyrophosphate synthetase 1
21. BRD7 ENSGALG00000003786 26858 0.967 - - - - - - - 0.967 - - bromodomain containing 7 [Source:NCBI gene;Acc:415730]
22. ZMYND11 ENSGALG00000006599 5740 0.958 - - - - - - 0.958 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
23. PELI1 ENSGALG00000008837 11561 0.953 - - - - - - - 0.953 - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
24. ARID4A ENSGALG00000012037 8554 0.949 - - - - - - 0.949 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
25. SDF4 ENSGALG00000001872 6382 0.942 - - - - - - 0.942 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
26. GCLM ENSGALG00000005782 15789 0.941 - - - - - - 0.941 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
27. EI24 ENSGALG00000038097 24081 0.94 - - - - - - 0.940 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
28. MRE11A MRE11A 5754 0.938 - - - - - - 0.938 - - -
29. TRAM1 ENSGALG00000041112 22876 0.937 - - - - - - 0.937 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
30. CDH3 5050 0.937 - - - - - - - 0.937 - - cadherin 3
31. FAM214A ENSGALG00000042839 3378 0.936 - - - - - - - 0.936 - - family with sequence similarity 214 member A [Source:NCBI gene;Acc:415416]
32. POR ENSGALG00000002053 5223 0.933 - - - - - - 0.933 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
33. KCTD9 ENSGALG00000000275 3455 0.932 - - - - - - 0.932 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
34. CLTCL1 ENSGALG00000041760 9351 0.932 - - - - - - - 0.932 - - clathrin, heavy chain-like 1, transcript variant X6
35. TM9SF3 ENSGALG00000005534 15290 0.932 - - - - - - 0.932 - - - transmembrane 9 superfamily member 3
36. PPP3R1 ENSGALG00000023648 3417 0.932 - - - - - - 0.932 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
37. UPF1 ENSGALG00000003220 9496 0.931 - - - - - - 0.931 - - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
38. XRN1 ENSGALG00000002706 4014 0.931 - - - - - - 0.931 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
39. LARP1 ENSGALG00000040109 14808 0.931 - - - - - - 0.931 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
40. ARHGAP29 ENSGALG00000005683 3622 0.93 - - - - - - 0.930 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
41. RILPL2 ENSGALG00000003321 5632 0.93 - - - - - - 0.930 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
42. NDUFA9 ENSGALG00000017282 14358 0.93 - - - - - - 0.930 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
43. MED30 ENSGALG00000030862 7163 0.929 - - - - - - - 0.929 - - mediator complex subunit 30 [Source:NCBI gene;Acc:420284]
44. ENSGALG00000027854 ENSGALG00000027854 5007 0.929 - - - - - - 0.929 - - -
45. ATN1 ENSGALG00000014554 3270 0.929 - - - - - - 0.929 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
46. POLR3E ENSGALG00000007008 4010 0.929 - - - - - - 0.929 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
47. HDGFL3 ENSGALG00000006036 13576 0.929 - - - - - - 0.929 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
48. MYST2 MYST2 8078 0.928 - - - - - - 0.928 - - -
49. TBCCD1 ENSGALG00000006566 2696 0.928 - - - - - - 0.928 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
50. RRN3 ENSGALG00000041989 3934 0.927 - - - - - - 0.927 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
51. SEMA4B ENSGALG00000008297 11202 0.927 - - - - - - 0.927 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
52. MAP1LC3A ENSGALG00000038721 2230 0.926 - - - - - - 0.926 - - - microtubule associated protein 1 light chain 3 alpha
53. SCRN1 ENSGALG00000011176 3783 0.926 - - - - - - 0.926 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
54. RBM12B ENSGALG00000035129 4314 0.926 - - - - - - 0.926 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
55. SOD2 ENSGALG00000011661 13178 0.926 - - - - - - 0.926 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
56. CENPF ENSGALG00000009690 10429 0.925 - - - - - - 0.925 - - - centromere protein F [Source:NCBI gene;Acc:395357]
57. NCOA4 ENSGALG00000002066 10544 0.925 - - - - - - 0.925 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
58. THOC2 ENSGALG00000008507 9501 0.925 - - - - - - 0.925 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
59. H2AFY_1 ENSGALG00000040141 4895 0.924 - - - - - - 0.924 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
60. NEO1 ENSGALG00000001774 10165 0.924 - - - - - - - - - 0.924 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
61. YBX1 ENSGALG00000004848 20992 0.923 - - - - - - 0.923 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
62. OGFOD1 6926 0.923 - - - - - - 0.923 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
63. E2F6 ENSGALG00000016454 4747 0.923 - - - - - - 0.923 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
64. HSPA12A ENSGALG00000009248 7783 0.922 - - - - - - - - - 0.922 heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
65. SHQ1 ENSGALG00000007798 1982 0.922 - - - - - - 0.922 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
66. AP2B1 ENSGALG00000042125 13229 0.921 - - - - - - 0.921 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
67. EIF4G3 ENSGALG00000010084 5881 0.921 - - - - - - 0.921 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
68. ZC3HC1 ENSGALG00000008003 2750 0.92 - - - - - - - - - 0.920 zinc finger C3HC-type containing 1 [Source:NCBI gene;Acc:416679]
69. KIF15 ENSGALG00000036645 9946 0.919 - - - - - - 0.919 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
70. SIRT1 ENSGALG00000002761 9028 0.918 - - - - - - 0.918 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
71. LATS2 4776 0.918 - - - - - - 0.918 - - - large tumor suppressor kinase 2
72. METTL11A METTL11A 11876 0.917 - - - - - - 0.917 - - -
73. AK6 ENSGALG00000020534 4791 0.917 - - - - - - 0.917 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
74. COPE ENSGALG00000003153 19444 0.917 - - - - - - 0.917 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
75. IRAK2 ENSGALG00000008407 5934 0.916 - - - - - - 0.916 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
76. PEPD ENSGALG00000004899 9785 0.916 - - - - - - 0.916 - - - peptidase D [Source:NCBI gene;Acc:415776]
77. TMEM108 ENSGALG00000036412 2903 0.916 - - - - - - 0.916 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
78. PNO1 ENSGALG00000009093 11153 0.916 - - - - - - 0.916 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
79. PMM2 ENSGALG00000007326 8260 0.915 - - - - - - 0.915 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
80. NRD1 NRD1 10827 0.914 - - - - - - 0.914 - - -
81. CACHD1 ENSGALG00000011024 2036 0.914 - - - - - - - - - 0.914 cache domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29314]
82. SMC4 ENSGALG00000009553 15715 0.914 - - - - - - - - - 0.914 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
83. SPDL1 ENSGALG00000001942 4403 0.914 - - - - - - - - - 0.914 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
84. WBP11 ENSGALG00000011745 11182 0.914 - - - - - - 0.914 - - - WW domain binding protein 11, transcript variant X1
85. SLC39A13 ENSGALG00000008122 2003 0.914 - - - - - - - - - 0.914 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
86. AKAP7 ENSGALG00000029794 3287 0.914 - - - - - - 0.914 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
87. DNAJA3 ENSGALG00000007821 3963 0.913 - - - - - - 0.913 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
88. ABCD3 ENSGALG00000005647 4844 0.913 - - - - - - 0.913 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
89. DISP1 3281 0.913 - - - - - - 0.913 - - - dispatched RND transporter family member 1, transcript variant X3
90. GRK4 ENSGALG00000015645 1065 0.913 - - - - - - - - - 0.913 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
91. DYNC1LI1 ENSGALG00000011491 11011 0.912 - - - - - - 0.912 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
92. LEPROTL1 ENSGALG00000024482 4251 0.912 - - - - - - 0.912 - - - leptin receptor overlapping transcript-like 1
93. ENSGALG00000005389 ENSGALG00000005389 553 0.912 - - - - - - - - - 0.912
94. MED6 ENSGALG00000029743 9414 0.912 - - - - - - 0.912 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
95. BTAF1 ENSGALG00000030598 3556 0.911 - - - - - - 0.911 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
96. ODF2 ENSGALG00000004767 3972 0.911 - - - - - - - - - 0.911 outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
97. CLCN3 ENSGALG00000009674 3704 0.911 - - - - - - 0.911 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
98. GRTP1 ENSGALG00000016828 3145 0.911 - - - - - - - - - 0.911 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
99. LAP3 ENSGALG00000006334 21076 0.91 - - - - - - 0.910 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
100. CRYM ENSGALG00000002484 3558 0.91 - - - - - - - - - 0.910 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]

There are 631 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA